RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
RC3H1-205ENST00000484867 NANOS1Q8WY41 292 aaKnown RBP10.26□□□□□ -0.77
RC3H1-205ENST00000484867 SPINT1O43278 529 aa10.25□□□□□ -0.77
RC3H1-205ENST00000484867 PTSQ03393 145 aa10.25□□□□□ -0.77
RC3H1-205ENST00000484867 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
RC3H1-205ENST00000484867 PDXDC2PQ6P474 469 aa10.25□□□□□ -0.77
RC3H1-205ENST00000484867 CBLBQ13191 982 aa10.24□□□□□ -0.77
RC3H1-205ENST00000484867 CARD14Q9BXL6 1004 aa10.24□□□□□ -0.77
RC3H1-205ENST00000484867 FBXO31Q5XUX0 539 aaPredicted RBP10.23□□□□□ -0.77
RC3H1-205ENST00000484867 OCSTAMPQ9BR26 566 aa10.23□□□□□ -0.77
RC3H1-205ENST00000484867 SLC24A3Q9HC58 644 aa10.22□□□□□ -0.77
RC3H1-205ENST00000484867 POLR3EQ9NVU0 708 aa10.22□□□□□ -0.77
RC3H1-205ENST00000484867 SLC35F4A4IF30 521 aa10.21□□□□□ -0.77
RC3H1-205ENST00000484867 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
RC3H1-205ENST00000484867 FIGNL2A6NMB9 653 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 LRRN4Q8WUT4 740 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 CNTNAP3BQ96NU0 1288 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
RC3H1-205ENST00000484867 CNTNAP3Q9BZ76 1288 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 FKBPLQ9UIM3 349 aa10.2□□□□□ -0.78
RC3H1-205ENST00000484867 RNFT1Q5M7Z0 435 aa10.19□□□□□ -0.78
RC3H1-205ENST00000484867 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
RC3H1-205ENST00000484867 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
RC3H1-205ENST00000484867 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
RC3H1-205ENST00000484867 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
RC3H1-205ENST00000484867 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
RC3H1-205ENST00000484867 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
RC3H1-205ENST00000484867 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
RC3H1-205ENST00000484867 CTSOP43234 321 aaPredicted RBP10.16□□□□□ -0.78
RC3H1-205ENST00000484867 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
RC3H1-205ENST00000484867 KCTD17Q8N5Z5 321 aa10.16□□□□□ -0.78
RC3H1-205ENST00000484867 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
RC3H1-205ENST00000484867 PPP2R2DQ66LE6 453 aa10.15□□□□□ -0.78
RC3H1-205ENST00000484867 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
RC3H1-205ENST00000484867 AGBL1Q96MI9 1066 aa10.15□□□□□ -0.78
RC3H1-205ENST00000484867 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
RC3H1-205ENST00000484867 ITGA6P23229 1130 aa10.14□□□□□ -0.79
RC3H1-205ENST00000484867 RASSF7Q02833 373 aa10.14□□□□□ -0.79
RC3H1-205ENST00000484867 DHX9Q08211 1270 aaKnown RBP10.14□□□□□ -0.79
RC3H1-205ENST00000484867 NR6A1Q15406 480 aa10.14□□□□□ -0.79
RC3H1-205ENST00000484867 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
RC3H1-205ENST00000484867 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
RC3H1-205ENST00000484867 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
RC3H1-205ENST00000484867 KDF1Q8NAX2 398 aaPredicted RBP10.13□□□□□ -0.79
RC3H1-205ENST00000484867 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
RC3H1-205ENST00000484867 ARHGEF15O94989 841 aa10.12□□□□□ -0.79
RC3H1-205ENST00000484867 TMEM151AQ8N4L1 468 aa10.12□□□□□ -0.79
RC3H1-205ENST00000484867 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
RC3H1-205ENST00000484867 RNF217Q8TC41 542 aa10.12□□□□□ -0.79
RC3H1-205ENST00000484867 INSM2Q96T92 566 aaPredicted RBP10.12□□□□□ -0.79
RC3H1-205ENST00000484867 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
RC3H1-205ENST00000484867 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
RC3H1-205ENST00000484867 VWA5B2Q8N398 1253 aa10.11□□□□□ -0.79
RC3H1-205ENST00000484867 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
RC3H1-205ENST00000484867 LILRA1O75019 489 aa10.1□□□□□ -0.79
RC3H1-205ENST00000484867 GDF11O95390 407 aa10.1□□□□□ -0.79
RC3H1-205ENST00000484867 RELBQ01201 579 aa10.1□□□□□ -0.79
RC3H1-205ENST00000484867 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
RC3H1-205ENST00000484867 PTK2Q05397 1052 aa10.09□□□□□ -0.79
RC3H1-205ENST00000484867 EPS8L1Q8TE68 723 aa10.09□□□□□ -0.79
RC3H1-205ENST00000484867 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
RC3H1-205ENST00000484867 ESPNB1AK53 854 aa10.07□□□□□ -0.8
RC3H1-205ENST00000484867 FOXD4L5Q5VV16 416 aaPredicted RBP10.07□□□□□ -0.8
RC3H1-205ENST00000484867 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
RC3H1-205ENST00000484867 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
RC3H1-205ENST00000484867 ADH1AP07327 375 aa10.06□□□□□ -0.8
RC3H1-205ENST00000484867 ZNF395Q9H8N7 513 aaPredicted RBP10.06□□□□□ -0.8
RC3H1-205ENST00000484867 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
RC3H1-205ENST00000484867 SVOPQ8N4V2 548 aa10.05□□□□□ -0.8
RC3H1-205ENST00000484867 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
RC3H1-205ENST00000484867 ERVH48-1M5A8F1 160 aa10.04□□□□□ -0.8
RC3H1-205ENST00000484867 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
RC3H1-205ENST00000484867 FAM117AQ9C073 453 aa10.04□□□□□ -0.8
RC3H1-205ENST00000484867 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
RC3H1-205ENST00000484867 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
RC3H1-205ENST00000484867 CDC14CA4D256 554 aa10.03□□□□□ -0.8
RC3H1-205ENST00000484867 PTGIRP43119 386 aa10.03□□□□□ -0.8
RC3H1-205ENST00000484867 GAS6Q14393 721 aa10.03□□□□□ -0.8
RC3H1-205ENST00000484867 AP1G2O75843 785 aa10.02□□□□□ -0.81
RC3H1-205ENST00000484867 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.81
RC3H1-205ENST00000484867 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
RC3H1-205ENST00000484867 ADAMTS2O95450 1211 aa10□□□□□ -0.81
RC3H1-205ENST00000484867 LYPD4Q6UWN0 246 aa10□□□□□ -0.81
RC3H1-205ENST00000484867 USP17L8P0C7I0 530 aa9.99□□□□□ -0.81
RC3H1-205ENST00000484867 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
RC3H1-205ENST00000484867 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
RC3H1-205ENST00000484867 DNMT3AQ9Y6K1 912 aaPredicted RBP9.99□□□□□ -0.81
RC3H1-205ENST00000484867 IRS1P35568 1242 aa9.98□□□□□ -0.81
RC3H1-205ENST00000484867 RNF144AP50876 292 aaPredicted RBP9.98□□□□□ -0.81
RC3H1-205ENST00000484867 LYSMD3Q7Z3D4 306 aa9.98□□□□□ -0.81
RC3H1-205ENST00000484867 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
RC3H1-205ENST00000484867 RAB15P59190 212 aa9.97□□□□□ -0.81
RC3H1-205ENST00000484867 DZIP3Q86Y13 1208 aaKnown RBP9.97□□□□□ -0.81
RC3H1-205ENST00000484867 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
RC3H1-205ENST00000484867 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
RC3H1-205ENST00000484867 CELA2BP08218 269 aaPredicted RBP9.95□□□□□ -0.82
RC3H1-205ENST00000484867 RFC5P40937 340 aa9.94□□□□□ -0.82
RC3H1-205ENST00000484867 PNMA1Q8ND90 353 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms