RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ARHGEF25Q86VW2 580 aa27.21■■□□□ 1.95
VCPKMT-203ENST00000484763 COL22A1Q8NFW1 1626 aaPredicted RBP27.2■■□□□ 1.94
VCPKMT-203ENST00000484763 CABLES1Q8TDN4 633 aa27.2■■□□□ 1.94
VCPKMT-203ENST00000484763 EIF4A2Q14240 407 aaKnown RBP27.19■■□□□ 1.94
VCPKMT-203ENST00000484763 IP6K1Q92551 441 aa27.18■■□□□ 1.94
VCPKMT-203ENST00000484763 RGPD1P0DJD0 1748 aa27.18■■□□□ 1.94
VCPKMT-203ENST00000484763 ABCC6O95255 1503 aa27.17■■□□□ 1.94
VCPKMT-203ENST00000484763 ZBTB7CA1YPR0 619 aa27.17■■□□□ 1.94
VCPKMT-203ENST00000484763 CPDO75976 1380 aa27.16■■□□□ 1.94
VCPKMT-203ENST00000484763 ZC3H6P61129 1189 aaKnown RBP27.15■■□□□ 1.94
VCPKMT-203ENST00000484763 CCDC146Q8IYE0 955 aa27.14■■□□□ 1.94
VCPKMT-203ENST00000484763 ZBED9Q6R2W3 1325 aa27.14■■□□□ 1.94
VCPKMT-203ENST00000484763 COL18A1P39060 1754 aa27.13■■□□□ 1.93
VCPKMT-203ENST00000484763 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
VCPKMT-203ENST00000484763 CENPBP07199 599 aaPredicted RBP27.12■■□□□ 1.93
VCPKMT-203ENST00000484763 RUNDC1Q96C34 613 aa27.12■■□□□ 1.93
VCPKMT-203ENST00000484763 KIAA0232Q92628 1395 aa27.11■■□□□ 1.93
VCPKMT-203ENST00000484763 RGPD5Q99666 1765 aa27.11■■□□□ 1.93
VCPKMT-203ENST00000484763 PNNQ9H307 717 aaKnown RBP27.11■■□□□ 1.93
VCPKMT-203ENST00000484763 FCHSD2O94868 740 aa27.1■■□□□ 1.93
VCPKMT-203ENST00000484763 RSPH6AQ9H0K4 717 aa27.08■■□□□ 1.93
VCPKMT-203ENST00000484763 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
VCPKMT-203ENST00000484763 SENP3-EIF4A1A0A087X0R7 540 aa27.06■■□□□ 1.92
VCPKMT-203ENST00000484763 HMOX1P09601 288 aa27.06■■□□□ 1.92
VCPKMT-203ENST00000484763 LTV1Q96GA3 475 aaPredicted RBP27.06■■□□□ 1.92
VCPKMT-203ENST00000484763 PLEKHF1Q96S99 279 aa27.06■■□□□ 1.92
VCPKMT-203ENST00000484763 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
VCPKMT-203ENST00000484763 MAPK8IP3Q9UPT6 1336 aa27.05■■□□□ 1.92
VCPKMT-203ENST00000484763 APAF1O14727 1248 aa27.05■■□□□ 1.92
VCPKMT-203ENST00000484763 PRDM11Q9NQV5 511 aa27.05■■□□□ 1.92
VCPKMT-203ENST00000484763 AXIN2Q9Y2T1 843 aa27.05■■□□□ 1.92
VCPKMT-203ENST00000484763 EYA1Q99502 592 aa27.04■■□□□ 1.92
VCPKMT-203ENST00000484763 PRKAR2BP31323 418 aa27.04■■□□□ 1.92
VCPKMT-203ENST00000484763 SULT6B1Q6IMI4 303 aa27.04■■□□□ 1.92
VCPKMT-203ENST00000484763 FAM208AQ9UK61 1670 aaKnown RBP27.04■■□□□ 1.92
VCPKMT-203ENST00000484763 KDRP35968 1356 aa27.03■■□□□ 1.92
VCPKMT-203ENST00000484763 CHRNA2Q15822 529 aa27.03■■□□□ 1.92
VCPKMT-203ENST00000484763 RGPD2P0DJD1 1756 aa27.03■■□□□ 1.92
VCPKMT-203ENST00000484763 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
VCPKMT-203ENST00000484763 ANKRD24Q8TF21 1146 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 ERBB3P21860 1342 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 NEFMP07197 916 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 AEBP1Q8IUX7 1158 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 TCP11L2Q8N4U5 519 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 NGEFQ8N5V2 710 aa27.02■■□□□ 1.92
VCPKMT-203ENST00000484763 SALL2Q9Y467 1007 aaPredicted RBP27.01■■□□□ 1.91
VCPKMT-203ENST00000484763 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
VCPKMT-203ENST00000484763 JCADQ9P266 1359 aa26.99■■□□□ 1.91
VCPKMT-203ENST00000484763 NCAPD2Q15021 1401 aa26.97■■□□□ 1.91
VCPKMT-203ENST00000484763 NBPF6Q5VWK0 638 aa26.96■■□□□ 1.91
VCPKMT-203ENST00000484763 NBPF4Q96M43 638 aa26.96■■□□□ 1.91
VCPKMT-203ENST00000484763 NCBP3Q53F19 620 aaKnown RBP26.95■■□□□ 1.91
VCPKMT-203ENST00000484763 COL5A2P05997 1499 aaPredicted RBP26.95■■□□□ 1.9
VCPKMT-203ENST00000484763 PHACTR3Q96KR7 559 aa26.94■■□□□ 1.9
VCPKMT-203ENST00000484763 RRP7AQ9Y3A4 280 aaKnown RBP26.94■■□□□ 1.9
VCPKMT-203ENST00000484763 TMPOP42166 694 aaKnown RBP26.93■■□□□ 1.9
VCPKMT-203ENST00000484763 FAM83GA6ND36 823 aa26.93■■□□□ 1.9
VCPKMT-203ENST00000484763 NEUROD2Q15784 382 aa26.93■■□□□ 1.9
VCPKMT-203ENST00000484763 USHBP1Q8N6Y0 703 aa26.93■■□□□ 1.9
VCPKMT-203ENST00000484763 CSB-PGBD3P0DP91 1061 aa26.92■■□□□ 1.9
VCPKMT-203ENST00000484763 ZNF521Q96K83 1311 aa26.92■■□□□ 1.9
VCPKMT-203ENST00000484763 HSPA1LP34931 641 aa26.9■■□□□ 1.9
VCPKMT-203ENST00000484763 PDE3BQ13370 1112 aa26.9■■□□□ 1.9
VCPKMT-203ENST00000484763 CCDC27Q2M243 656 aa26.9■■□□□ 1.9
VCPKMT-203ENST00000484763 PLCH1Q4KWH8 1693 aa26.9■■□□□ 1.9
VCPKMT-203ENST00000484763 NFE2L2Q16236 605 aa26.9■■□□□ 1.9
VCPKMT-203ENST00000484763 DLG5Q8TDM6 1919 aa26.89■■□□□ 1.9
VCPKMT-203ENST00000484763 WDR17Q8IZU2 1322 aa26.89■■□□□ 1.9
VCPKMT-203ENST00000484763 PHF23Q9BUL5 403 aaPredicted RBP26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 NLRP2Q9NX02 1062 aa26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 NUTM2BA6NNL0 878 aaPredicted RBP26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 NUTM2EB1AL46 878 aaPredicted RBP26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 RIPK4P57078 832 aa26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 NUTM2AQ8IVF1 878 aaPredicted RBP26.88■■□□□ 1.89
VCPKMT-203ENST00000484763 WWC1Q8IX03 1113 aa26.87■■□□□ 1.89
VCPKMT-203ENST00000484763 SPATA31A6Q5VVP1 1343 aa26.86■■□□□ 1.89
VCPKMT-203ENST00000484763 ADAMTS2O95450 1211 aa26.86■■□□□ 1.89
VCPKMT-203ENST00000484763 BTG4Q9NY30 223 aa26.86■■□□□ 1.89
VCPKMT-203ENST00000484763 GOLGA2Q08379 1002 aa26.83■■□□□ 1.89
VCPKMT-203ENST00000484763 NWD2Q9ULI1 1742 aa26.83■■□□□ 1.89
VCPKMT-203ENST00000484763 EVA1CP58658 441 aa26.83■■□□□ 1.89
VCPKMT-203ENST00000484763 TRIM35Q9UPQ4 493 aa26.83■■□□□ 1.89
VCPKMT-203ENST00000484763 NRAPQ86VF7 1730 aa26.83■■□□□ 1.88
VCPKMT-203ENST00000484763 TOM1L2Q6ZVM7 507 aa26.82■■□□□ 1.88
VCPKMT-203ENST00000484763 GAS2L2Q8NHY3 880 aa26.82■■□□□ 1.88
VCPKMT-203ENST00000484763 STRN4Q9NRL3 753 aa26.82■■□□□ 1.88
VCPKMT-203ENST00000484763 LMOD3Q0VAK6 560 aa26.81■■□□□ 1.88
VCPKMT-203ENST00000484763 PLEKHG2Q9H7P9 1386 aa26.81■■□□□ 1.88
VCPKMT-203ENST00000484763 MTHFSDQ2M296 383 aaKnown RBP26.81■■□□□ 1.88
VCPKMT-203ENST00000484763 WDR63Q8IWG1 891 aa26.81■■□□□ 1.88
VCPKMT-203ENST00000484763 CDCA7LQ96GN5 454 aa26.8■■□□□ 1.88
VCPKMT-203ENST00000484763 CRB1P82279 1406 aa26.8■■□□□ 1.88
VCPKMT-203ENST00000484763 LRP6O75581 1613 aa26.79■■□□□ 1.88
VCPKMT-203ENST00000484763 LARP1Q6PKG0 1096 aaKnown RBP26.79■■□□□ 1.88
VCPKMT-203ENST00000484763 RAPGEF4Q8WZA2 1011 aa26.79■■□□□ 1.88
VCPKMT-203ENST00000484763 PARP4Q9UKK3 1724 aaKnown RBP26.78■■□□□ 1.88
VCPKMT-203ENST00000484763 CARD10Q9BWT7 1032 aa26.78■■□□□ 1.88
VCPKMT-203ENST00000484763 MEGF6O75095 1541 aa26.78■■□□□ 1.88
VCPKMT-203ENST00000484763 SLIT2O94813 1529 aa26.78■■□□□ 1.88
VCPKMT-203ENST00000484763 E9PSI1 815 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms