RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 CHRNA2Q15822 529 aa25.66■■□□□ 1.7
PDLIM4-207ENST00000484620 COL18A1P39060 1754 aa25.65■■□□□ 1.7
PDLIM4-207ENST00000484620 IP6K1Q92551 441 aa25.65■■□□□ 1.7
PDLIM4-207ENST00000484620 BLMP54132 1417 aaPredicted RBP25.64■■□□□ 1.7
PDLIM4-207ENST00000484620 FAM83GA6ND36 823 aa25.64■■□□□ 1.7
PDLIM4-207ENST00000484620 HOXC9P31274 260 aa25.64■■□□□ 1.7
PDLIM4-207ENST00000484620 CFAP53Q96M91 514 aa25.64■■□□□ 1.7
PDLIM4-207ENST00000484620 LMO7Q8WWI1 1683 aa25.64■■□□□ 1.69
PDLIM4-207ENST00000484620 PLCH1Q4KWH8 1693 aa25.63■■□□□ 1.69
PDLIM4-207ENST00000484620 C8orf37Q96NL8 207 aa25.62■■□□□ 1.69
PDLIM4-207ENST00000484620 INSRP06213 1382 aa25.61■■□□□ 1.69
PDLIM4-207ENST00000484620 NGLY1Q96IV0 654 aa25.61■■□□□ 1.69
PDLIM4-207ENST00000484620 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
PDLIM4-207ENST00000484620 NWD2Q9ULI1 1742 aa25.6■■□□□ 1.69
PDLIM4-207ENST00000484620 HSP90AB2PQ58FF8 381 aa25.59■■□□□ 1.69
PDLIM4-207ENST00000484620 CAMTA1Q9Y6Y1 1673 aa25.58■■□□□ 1.69
PDLIM4-207ENST00000484620 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
PDLIM4-207ENST00000484620 AXIN2Q9Y2T1 843 aa25.58■■□□□ 1.69
PDLIM4-207ENST00000484620 SLIT2O94813 1529 aa25.58■■□□□ 1.68
PDLIM4-207ENST00000484620 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
PDLIM4-207ENST00000484620 EVA1CP58658 441 aa25.55■■□□□ 1.68
PDLIM4-207ENST00000484620 ANKRD24Q8TF21 1146 aa25.55■■□□□ 1.68
PDLIM4-207ENST00000484620 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 COL3A1P02461 1466 aaPredicted RBP25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 MIER1Q8N108 512 aa25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 FNBP4Q8N3X1 1017 aaPredicted RBP25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 ERBB3P21860 1342 aa25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 FAM208AQ9UK61 1670 aaKnown RBP25.54■■□□□ 1.68
PDLIM4-207ENST00000484620 CSB-PGBD3P0DP91 1061 aa25.53■■□□□ 1.68
PDLIM4-207ENST00000484620 STRN4Q9NRL3 753 aa25.52■■□□□ 1.68
PDLIM4-207ENST00000484620 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.51■■□□□ 1.68
PDLIM4-207ENST00000484620 CCER2I3L3R5 266 aa25.51■■□□□ 1.67
PDLIM4-207ENST00000484620 EIF4A2Q14240 407 aaKnown RBP25.51■■□□□ 1.67
PDLIM4-207ENST00000484620 AFF2P51816 1311 aa25.51■■□□□ 1.67
PDLIM4-207ENST00000484620 UNC5CLQ8IV45 518 aa25.5■■□□□ 1.67
PDLIM4-207ENST00000484620 WDR17Q8IZU2 1322 aa25.5■■□□□ 1.67
PDLIM4-207ENST00000484620 MRS2Q9HD23 443 aa25.5■■□□□ 1.67
PDLIM4-207ENST00000484620 USP21Q9UK80 565 aa25.5■■□□□ 1.67
PDLIM4-207ENST00000484620 NUDCQ9Y266 331 aa25.5■■□□□ 1.67
PDLIM4-207ENST00000484620 BCL9LQ86UU0 1499 aa25.48■■□□□ 1.67
PDLIM4-207ENST00000484620 IL13P35225 146 aa25.48■■□□□ 1.67
PDLIM4-207ENST00000484620 TOM1L2Q6ZVM7 507 aa25.47■■□□□ 1.67
PDLIM4-207ENST00000484620 CRB1P82279 1406 aa25.46■■□□□ 1.67
PDLIM4-207ENST00000484620 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
PDLIM4-207ENST00000484620 LARP1Q6PKG0 1096 aaKnown RBP25.45■■□□□ 1.66
PDLIM4-207ENST00000484620 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
PDLIM4-207ENST00000484620 U2SURPO15042 1029 aaKnown RBP25.44■■□□□ 1.66
PDLIM4-207ENST00000484620 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
PDLIM4-207ENST00000484620 RGPD1P0DJD0 1748 aa25.43■■□□□ 1.66
PDLIM4-207ENST00000484620 VPS72Q15906 364 aa25.43■■□□□ 1.66
PDLIM4-207ENST00000484620 ZNF772Q68DY9 489 aaPredicted RBP25.43■■□□□ 1.66
PDLIM4-207ENST00000484620 WDR43Q15061 677 aaKnown RBP eCLIP25.42■■□□□ 1.66
PDLIM4-207ENST00000484620 EYA1Q99502 592 aa25.42■■□□□ 1.66
PDLIM4-207ENST00000484620 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
PDLIM4-207ENST00000484620 CARD10Q9BWT7 1032 aa25.42■■□□□ 1.66
PDLIM4-207ENST00000484620 CCDC9Q9Y3X0 531 aaKnown RBP25.42■■□□□ 1.66
PDLIM4-207ENST00000484620 IGSF1Q8N6C5 1336 aa25.41■■□□□ 1.66
PDLIM4-207ENST00000484620 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
PDLIM4-207ENST00000484620 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
PDLIM4-207ENST00000484620 TRPC5Q9UL62 973 aaPredicted RBP25.41■■□□□ 1.66
PDLIM4-207ENST00000484620 ATRNO75882 1429 aa25.39■■□□□ 1.66
PDLIM4-207ENST00000484620 U2AF1L5P0DN76 240 aaPredicted RBP25.39■■□□□ 1.66
PDLIM4-207ENST00000484620 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.66
PDLIM4-207ENST00000484620 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
PDLIM4-207ENST00000484620 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
PDLIM4-207ENST00000484620 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
PDLIM4-207ENST00000484620 NCAPD2Q15021 1401 aa25.37■■□□□ 1.65
PDLIM4-207ENST00000484620 USHBP1Q8N6Y0 703 aa25.37■■□□□ 1.65
PDLIM4-207ENST00000484620 USP35Q9P2H5 1018 aa25.37■■□□□ 1.65
PDLIM4-207ENST00000484620 SULT6B1Q6IMI4 303 aa25.36■■□□□ 1.65
PDLIM4-207ENST00000484620 PNISRQ8TF01 805 aaKnown RBP25.36■■□□□ 1.65
PDLIM4-207ENST00000484620 QTRT2Q9H974 415 aaKnown RBP25.36■■□□□ 1.65
PDLIM4-207ENST00000484620 THRAP3Q9Y2W1 955 aaKnown RBP25.36■■□□□ 1.65
PDLIM4-207ENST00000484620 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
PDLIM4-207ENST00000484620 KDRP35968 1356 aa25.34■■□□□ 1.65
PDLIM4-207ENST00000484620 HMOX1P09601 288 aa25.34■■□□□ 1.65
PDLIM4-207ENST00000484620 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
PDLIM4-207ENST00000484620 FCHSD2O94868 740 aa25.32■■□□□ 1.64
PDLIM4-207ENST00000484620 AEBP1Q8IUX7 1158 aa25.32■■□□□ 1.64
PDLIM4-207ENST00000484620 RAPGEF4Q8WZA2 1011 aa25.32■■□□□ 1.64
PDLIM4-207ENST00000484620 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
PDLIM4-207ENST00000484620 WNK3Q9BYP7 1800 aa25.32■■□□□ 1.64
PDLIM4-207ENST00000484620 GLI3P10071 1580 aa25.31■■□□□ 1.64
PDLIM4-207ENST00000484620 PARP4Q9UKK3 1724 aaKnown RBP25.3■■□□□ 1.64
PDLIM4-207ENST00000484620 BARGINQ6ZT62 677 aa25.3■■□□□ 1.64
PDLIM4-207ENST00000484620 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
PDLIM4-207ENST00000484620 CDCA7Q9BWT1 371 aaPredicted RBP25.3■■□□□ 1.64
PDLIM4-207ENST00000484620 ADAMTS8Q9UP79 889 aa25.3■■□□□ 1.64
PDLIM4-207ENST00000484620 IL2RBP14784 551 aa25.29■■□□□ 1.64
PDLIM4-207ENST00000484620 TATP17735 454 aaPredicted RBP25.29■■□□□ 1.64
PDLIM4-207ENST00000484620 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
PDLIM4-207ENST00000484620 NEFMP07197 916 aa25.28■■□□□ 1.64
PDLIM4-207ENST00000484620 RGS17Q9UGC6 210 aaPredicted RBP25.28■■□□□ 1.64
PDLIM4-207ENST00000484620 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
PDLIM4-207ENST00000484620 PRKAR2BP31323 418 aa25.27■■□□□ 1.64
PDLIM4-207ENST00000484620 RBM6P78332 1123 aaKnown RBP25.27■■□□□ 1.64
PDLIM4-207ENST00000484620 MEGF6O75095 1541 aa25.27■■□□□ 1.64
PDLIM4-207ENST00000484620 DISP2A7MBM2 1401 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms