RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 SH3BP2P78314 561 aa6.45□□□□□ -1.38
ERCC8-206ENST00000484330 LINC01559Q495D7 138 aa6.45□□□□□ -1.38
ERCC8-206ENST00000484330 XP32Q5T750 250 aa6.45□□□□□ -1.38
ERCC8-206ENST00000484330 ARHGAP9Q9BRR9 750 aa6.45□□□□□ -1.38
ERCC8-206ENST00000484330 TBC1D2BQ9UPU7 963 aa6.45□□□□□ -1.38
ERCC8-206ENST00000484330 ZBBXA8MT70 800 aa6.44□□□□□ -1.38
ERCC8-206ENST00000484330 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
ERCC8-206ENST00000484330 KCNMA1Q12791 1236 aa6.44□□□□□ -1.38
ERCC8-206ENST00000484330 ZBTB33Q86T24 672 aa6.44□□□□□ -1.38
ERCC8-206ENST00000484330 EHBP1Q8NDI1 1231 aa6.44□□□□□ -1.38
ERCC8-206ENST00000484330 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
ERCC8-206ENST00000484330 VEGFBP49765 207 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 GSK3AP49840 483 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 NR1H3Q13133 447 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
ERCC8-206ENST00000484330 SH3BP5LQ7L8J4 393 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 KCTD17Q8N5Z5 321 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 FAM174AQ8TBP5 190 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 ZMYND15Q9H091 742 aa6.43□□□□□ -1.38
ERCC8-206ENST00000484330 SOX11P35716 441 aa6.42□□□□□ -1.38
ERCC8-206ENST00000484330 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
ERCC8-206ENST00000484330 PROSER2Q86WR7 435 aaPredicted RBP6.42□□□□□ -1.38
ERCC8-206ENST00000484330 CDV3Q9UKY7 258 aaKnown RBP6.42□□□□□ -1.38
ERCC8-206ENST00000484330 MAGEB6P1A0A0J9YX57 407 aa6.41□□□□□ -1.38
ERCC8-206ENST00000484330 SKOR1P84550 965 aa6.41□□□□□ -1.38
ERCC8-206ENST00000484330 SH3RF1Q7Z6J0 888 aa6.41□□□□□ -1.38
ERCC8-206ENST00000484330 TRIM52Q96A61 297 aa6.41□□□□□ -1.38
ERCC8-206ENST00000484330 POM121Q96HA1 1249 aa6.41□□□□□ -1.38
ERCC8-206ENST00000484330 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 DZIP3Q86Y13 1208 aaKnown RBP6.4□□□□□ -1.38
ERCC8-206ENST00000484330 MPNDQ8N594 471 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 SLC10A4Q96EP9 437 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 CARD14Q9BXL6 1004 aa6.4□□□□□ -1.38
ERCC8-206ENST00000484330 FBXO45P0C2W1 286 aa6.39□□□□□ -1.39
ERCC8-206ENST00000484330 IRF5Q13568 498 aa6.39□□□□□ -1.39
ERCC8-206ENST00000484330 TRMT44Q8IYL2 757 aaKnown RBP6.39□□□□□ -1.39
ERCC8-206ENST00000484330 TMEM151AQ8N4L1 468 aa6.39□□□□□ -1.39
ERCC8-206ENST00000484330 ADAM32Q8TC27 787 aa6.39□□□□□ -1.39
ERCC8-206ENST00000484330 IGHA1P01876 353 aa6.38□□□□□ -1.39
ERCC8-206ENST00000484330 NBPF20Q3BBV1 942 aa6.38□□□□□ -1.39
ERCC8-206ENST00000484330 CCDC125Q86Z20 511 aa6.38□□□□□ -1.39
ERCC8-206ENST00000484330 C1QTNF2Q9BXJ5 285 aa6.38□□□□□ -1.39
ERCC8-206ENST00000484330 RNF225M0QZC1 329 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-206ENST00000484330 TRAK2O60296 914 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 GPR37L1O60883 481 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 SEMA3FQ13275 785 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 ERFEQ4G0M1 354 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 PCDHB9Q9Y5E1 797 aa6.37□□□□□ -1.39
ERCC8-206ENST00000484330 CAPN5O15484 640 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-206ENST00000484330 ALDH1A1P00352 501 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 BMP1P13497 986 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 VAC14Q08AM6 782 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 VASH1Q7L8A9 365 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-206ENST00000484330 FNBP4Q8N3X1 1017 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-206ENST00000484330 PSMG3-AS1Q96PY0 264 aa6.36□□□□□ -1.39
ERCC8-206ENST00000484330 SIAH2O43255 324 aa6.35□□□□□ -1.39
ERCC8-206ENST00000484330 ARID5BQ14865 1188 aa6.35□□□□□ -1.39
ERCC8-206ENST00000484330 CDK15Q96Q40 435 aa6.35□□□□□ -1.39
ERCC8-206ENST00000484330 WASF2Q9Y6W5 498 aa6.35□□□□□ -1.39
ERCC8-206ENST00000484330 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
ERCC8-206ENST00000484330 DHX9Q08211 1270 aaKnown RBP6.34□□□□□ -1.39
ERCC8-206ENST00000484330 NR5A1Q13285 461 aa6.34□□□□□ -1.39
ERCC8-206ENST00000484330 SEPT12Q8IYM1 358 aa6.34□□□□□ -1.39
ERCC8-206ENST00000484330 OCSTAMPQ9BR26 566 aa6.34□□□□□ -1.39
ERCC8-206ENST00000484330 GDF11O95390 407 aa6.33□□□□□ -1.4
ERCC8-206ENST00000484330 ADH1CP00326 375 aa6.33□□□□□ -1.4
ERCC8-206ENST00000484330 RASSF7Q02833 373 aa6.33□□□□□ -1.4
ERCC8-206ENST00000484330 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
ERCC8-206ENST00000484330 KCTD15Q96SI1 283 aaPredicted RBP6.33□□□□□ -1.4
ERCC8-206ENST00000484330 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-206ENST00000484330 SLFNL1Q499Z3 407 aa6.32□□□□□ -1.4
ERCC8-206ENST00000484330 TIMELESSQ9UNS1 1208 aa6.32□□□□□ -1.4
ERCC8-206ENST00000484330 TLL2Q9Y6L7 1015 aa6.32□□□□□ -1.4
ERCC8-206ENST00000484330 HDGFL1Q5TGJ6 251 aa6.31□□□□□ -1.4
ERCC8-206ENST00000484330 KRTAP1-3Q8IUG1 177 aa6.31□□□□□ -1.4
ERCC8-206ENST00000484330 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
ERCC8-206ENST00000484330 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
ERCC8-206ENST00000484330 ALG2Q9H553 416 aa6.31□□□□□ -1.4
ERCC8-206ENST00000484330 CEP126Q9P2H0 1117 aa6.31□□□□□ -1.4
ERCC8-206ENST00000484330 FSHRP23945 695 aa6.3□□□□□ -1.4
ERCC8-206ENST00000484330 GLMNQ92990 594 aa6.3□□□□□ -1.4
ERCC8-206ENST00000484330 ZNF777Q9ULD5 760 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-206ENST00000484330 POM121CA8CG34 1229 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 ESPNB1AK53 854 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 GRM5P41594 1212 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 NNTQ13423 1086 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 RNF135Q8IUD6 432 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 NFATC2IPQ8NCF5 419 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 ESF1Q9H501 851 aaKnown RBP6.29□□□□□ -1.4
ERCC8-206ENST00000484330 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 EMILIN1Q9Y6C2 1016 aa6.29□□□□□ -1.4
ERCC8-206ENST00000484330 LZTS3O60299 673 aaPredicted RBP6.28□□□□□ -1.4
ERCC8-206ENST00000484330 GIGYF1O75420 1035 aaPredicted RBP6.28□□□□□ -1.4
ERCC8-206ENST00000484330 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms