RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 USP6P35125 1406 aa14.22□□□□□ -0.13
CPSF4-213ENST00000484112 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-213ENST00000484112 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
CPSF4-213ENST00000484112 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-213ENST00000484112 TRPM1Q7Z4N2 1603 aa14.21□□□□□ -0.13
CPSF4-213ENST00000484112 ZBTB7AO95365 584 aa14.2□□□□□ -0.14
CPSF4-213ENST00000484112 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-213ENST00000484112 PDGFDQ9GZP0 370 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-213ENST00000484112 WDR17Q8IZU2 1322 aa14.19□□□□□ -0.14
CPSF4-213ENST00000484112 NINLQ9Y2I6 1382 aa14.19□□□□□ -0.14
CPSF4-213ENST00000484112 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
CPSF4-213ENST00000484112 PROM2Q8N271 834 aa14.18□□□□□ -0.14
CPSF4-213ENST00000484112 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-213ENST00000484112 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-213ENST00000484112 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
CPSF4-213ENST00000484112 SLIT3O75094 1523 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 LRRC37A3O60309 1634 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 EXOC5O00471 708 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 STK32BQ9NY57 414 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
CPSF4-213ENST00000484112 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
CPSF4-213ENST00000484112 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-213ENST00000484112 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
CPSF4-213ENST00000484112 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
CPSF4-213ENST00000484112 TXNRD1Q16881 649 aa14.15□□□□□ -0.14
CPSF4-213ENST00000484112 SBF2Q86WG5 1849 aa14.14□□□□□ -0.15
CPSF4-213ENST00000484112 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-213ENST00000484112 COL18A1P39060 1754 aa14.14□□□□□ -0.15
CPSF4-213ENST00000484112 PIK3C2AO00443 1686 aa14.14□□□□□ -0.15
CPSF4-213ENST00000484112 SLC15A2Q16348 729 aa14.13□□□□□ -0.15
CPSF4-213ENST00000484112 ACSBG1Q96GR2 724 aa14.13□□□□□ -0.15
CPSF4-213ENST00000484112 PTGER2P43116 358 aa14.12□□□□□ -0.15
CPSF4-213ENST00000484112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPSF4-213ENST00000484112 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
CPSF4-213ENST00000484112 KTN1Q86UP2 1357 aaKnown RBP14.11□□□□□ -0.15
CPSF4-213ENST00000484112 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
CPSF4-213ENST00000484112 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
CPSF4-213ENST00000484112 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
CPSF4-213ENST00000484112 FHDC1Q9C0D6 1143 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-213ENST00000484112 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
CPSF4-213ENST00000484112 RGPD3A6NKT7 1758 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-213ENST00000484112 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
CPSF4-213ENST00000484112 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
CPSF4-213ENST00000484112 BCL9O00512 1426 aa14.1□□□□□ -0.15
CPSF4-213ENST00000484112 CASZ1Q86V15 1759 aa14.1□□□□□ -0.15
CPSF4-213ENST00000484112 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
CPSF4-213ENST00000484112 SYT17Q9BSW7 474 aa14.09□□□□□ -0.15
CPSF4-213ENST00000484112 MTFR1LQ9H019 292 aa14.09□□□□□ -0.15
CPSF4-213ENST00000484112 AKAP12Q02952 1782 aa14.09□□□□□ -0.15
CPSF4-213ENST00000484112 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.15
CPSF4-213ENST00000484112 TMC1Q8TDI8 760 aa14.08□□□□□ -0.16
CPSF4-213ENST00000484112 MYOM1P52179 1685 aa14.07□□□□□ -0.16
CPSF4-213ENST00000484112 NME9Q86XW9 330 aa14.07□□□□□ -0.16
CPSF4-213ENST00000484112 ZNF784Q8NCA9 323 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-213ENST00000484112 IL2RBP14784 551 aa14.06□□□□□ -0.16
CPSF4-213ENST00000484112 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
CPSF4-213ENST00000484112 NFAT5O94916 1531 aa14.05□□□□□ -0.16
CPSF4-213ENST00000484112 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CPSF4-213ENST00000484112 ARXQ96QS3 562 aa14.05□□□□□ -0.16
CPSF4-213ENST00000484112 ERBB3P21860 1342 aa14.05□□□□□ -0.16
CPSF4-213ENST00000484112 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
CPSF4-213ENST00000484112 PUS7Q96PZ0 661 aaKnown RBP14.04□□□□□ -0.16
CPSF4-213ENST00000484112 SGIP1Q9BQI5 828 aa14.04□□□□□ -0.16
CPSF4-213ENST00000484112 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-213ENST00000484112 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
CPSF4-213ENST00000484112 USP31Q70CQ4 1352 aa14.02□□□□□ -0.17
CPSF4-213ENST00000484112 ZNF827Q17R98 1081 aa14.02□□□□□ -0.17
CPSF4-213ENST00000484112 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-213ENST00000484112 SLC12A5Q9H2X9 1139 aa14.02□□□□□ -0.17
CPSF4-213ENST00000484112 GPR162Q16538 588 aa14.01□□□□□ -0.17
CPSF4-213ENST00000484112 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
CPSF4-213ENST00000484112 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
CPSF4-213ENST00000484112 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
CPSF4-213ENST00000484112 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
CPSF4-213ENST00000484112 ABCC6O95255 1503 aa14□□□□□ -0.17
CPSF4-213ENST00000484112 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
CPSF4-213ENST00000484112 KAT6BQ8WYB5 2073 aa13.99□□□□□ -0.17
CPSF4-213ENST00000484112 USP47Q96K76 1375 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 POLD1P28340 1107 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 KCNQ4P56696 695 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 CD163L1Q9NR16 1453 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
CPSF4-213ENST00000484112 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
CPSF4-213ENST00000484112 IP6K1Q92551 441 aa13.97□□□□□ -0.17
CPSF4-213ENST00000484112 TFCP2L1Q9NZI6 479 aa13.97□□□□□ -0.17
CPSF4-213ENST00000484112 BTAF1O14981 1849 aa13.97□□□□□ -0.17
CPSF4-213ENST00000484112 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
CPSF4-213ENST00000484112 C1QTNF8P60827 252 aa13.96□□□□□ -0.17
CPSF4-213ENST00000484112 SLC27A3Q5K4L6 730 aa13.96□□□□□ -0.17
CPSF4-213ENST00000484112 TESK2Q96S53 571 aa13.96□□□□□ -0.17
CPSF4-213ENST00000484112 LTN1O94822 1766 aa13.96□□□□□ -0.18
CPSF4-213ENST00000484112 PAPPAQ13219 1627 aa13.95□□□□□ -0.18
CPSF4-213ENST00000484112 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
CPSF4-213ENST00000484112 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
CPSF4-213ENST00000484112 EDC4Q6P2E9 1401 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms