RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZRANB1Q9UGI0 708 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 KIAA0232Q92628 1395 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 SBNO2Q9Y2G9 1366 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 SSH2Q76I76 1423 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 MIER1Q8N108 512 aa9.6□□□□□ -0.87
BRCA1-216ENST00000484087 ABTB2Q8N961 1025 aa9.6□□□□□ -0.87
BRCA1-216ENST00000484087 TMC1Q8TDI8 760 aa9.6□□□□□ -0.87
BRCA1-216ENST00000484087 SLC12A5Q9H2X9 1139 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 BTG4Q9NY30 223 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 A0A1W2PP64 1363 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 LTN1O94822 1766 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 SLIT3O75094 1523 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 ATAD2Q6PL18 1390 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 CLCN6P51797 869 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 UNC5CLQ8IV45 518 aa9.59□□□□□ -0.87
BRCA1-216ENST00000484087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 CCDC9Q9Y3X0 531 aaKnown RBP9.59□□□□□ -0.87
BRCA1-216ENST00000484087 CAMTA1Q9Y6Y1 1673 aa9.58□□□□□ -0.88
BRCA1-216ENST00000484087 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-216ENST00000484087 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-216ENST00000484087 HSPA5P11021 654 aaKnown RBP9.58□□□□□ -0.88
BRCA1-216ENST00000484087 CD44P16070 742 aaKnown RBP9.58□□□□□ -0.88
BRCA1-216ENST00000484087 PRDM11Q9NQV5 511 aa9.58□□□□□ -0.88
BRCA1-216ENST00000484087 COL18A1P39060 1754 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 USP19O94966 1318 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 DDX10Q13206 875 aaKnown RBP9.57□□□□□ -0.88
BRCA1-216ENST00000484087 NME9Q86XW9 330 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-216ENST00000484087 STRN4Q9NRL3 753 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 FARP1Q9Y4F1 1045 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-216ENST00000484087 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
BRCA1-216ENST00000484087 NFAT5O94916 1531 aa9.56□□□□□ -0.88
BRCA1-216ENST00000484087 NLRP6P59044 892 aa9.56□□□□□ -0.88
BRCA1-216ENST00000484087 WNK3Q9BYP7 1800 aa9.55□□□□□ -0.88
BRCA1-216ENST00000484087 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
BRCA1-216ENST00000484087 USP35Q9P2H5 1018 aa9.55□□□□□ -0.88
BRCA1-216ENST00000484087 THSD7AQ9UPZ6 1657 aa9.55□□□□□ -0.88
BRCA1-216ENST00000484087 A0A0G2JS52 829 aa9.54□□□□□ -0.88
BRCA1-216ENST00000484087 GCP02774 474 aa9.54□□□□□ -0.88
BRCA1-216ENST00000484087 MYT1Q01538 1121 aa9.54□□□□□ -0.88
BRCA1-216ENST00000484087 FAM98CQ17RN3 349 aaKnown RBP9.54□□□□□ -0.88
BRCA1-216ENST00000484087 FAM182BQ5T319 152 aa9.54□□□□□ -0.88
BRCA1-216ENST00000484087 COL5A2P05997 1499 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-216ENST00000484087 ANP32CO43423 234 aa9.53□□□□□ -0.88
BRCA1-216ENST00000484087 FBLN1P23142 703 aa9.53□□□□□ -0.88
BRCA1-216ENST00000484087 VPS72Q15906 364 aa9.53□□□□□ -0.88
BRCA1-216ENST00000484087 NLRP13Q86W25 1043 aa9.53□□□□□ -0.88
BRCA1-216ENST00000484087 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCA1-216ENST00000484087 EDC4Q6P2E9 1401 aaKnown RBP9.53□□□□□ -0.88
BRCA1-216ENST00000484087 LARP1Q6PKG0 1096 aaKnown RBP9.53□□□□□ -0.88
BRCA1-216ENST00000484087 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
BRCA1-216ENST00000484087 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.88
BRCA1-216ENST00000484087 OVOS2A0A0J9YW53 1432 aa9.52□□□□□ -0.89
BRCA1-216ENST00000484087 OVOS2Q6IE36 1432 aa9.52□□□□□ -0.89
BRCA1-216ENST00000484087 TMF1P82094 1093 aa9.52□□□□□ -0.89
BRCA1-216ENST00000484087 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-216ENST00000484087 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
BRCA1-216ENST00000484087 LRRC37A3O60309 1634 aa9.52□□□□□ -0.89
BRCA1-216ENST00000484087 CPDO75976 1380 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 SPATA31A5Q5VU36 1347 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 SPATA31A7Q8IWB4 1347 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 TTC21AQ8NDW8 1320 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
BRCA1-216ENST00000484087 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-216ENST00000484087 SPATA31A1Q5TZJ5 1347 aa9.5□□□□□ -0.89
BRCA1-216ENST00000484087 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-216ENST00000484087 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 WASHC2AQ641Q2 1341 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 CCDC7Q96M83 1385 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 NSD3Q9BZ95 1437 aa9.49□□□□□ -0.89
BRCA1-216ENST00000484087 TNS1Q9HBL0 1735 aaKnown RBP9.49□□□□□ -0.89
BRCA1-216ENST00000484087 PARP4Q9UKK3 1724 aaKnown RBP9.49□□□□□ -0.89
BRCA1-216ENST00000484087 EVA1CP58658 441 aa9.48□□□□□ -0.89
BRCA1-216ENST00000484087 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
BRCA1-216ENST00000484087 YTHDC1Q96MU7 727 aaKnown RBP9.48□□□□□ -0.89
BRCA1-216ENST00000484087 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
BRCA1-216ENST00000484087 AATKQ6ZMQ8 1374 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 NINLQ9Y2I6 1382 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 ANKRD26Q9UPS8 1709 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 CRB1P82279 1406 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 CCER2I3L3R5 266 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 KRT27Q7Z3Y8 459 aa9.47□□□□□ -0.89
BRCA1-216ENST00000484087 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.9
BRCA1-216ENST00000484087 POTEMA6NI47 508 aa9.46□□□□□ -0.9
BRCA1-216ENST00000484087 RRS1Q15050 365 aaKnown RBP9.46□□□□□ -0.9
BRCA1-216ENST00000484087 TOM1L2Q6ZVM7 507 aa9.46□□□□□ -0.9
BRCA1-216ENST00000484087 DEFB132Q7Z7B7 95 aa9.46□□□□□ -0.9
BRCA1-216ENST00000484087 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms