RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 RGPD5Q99666 1765 aa24.95■■□□□ 1.59
HDAC6-225ENST00000483506 EVA1CP58658 441 aa24.95■■□□□ 1.58
HDAC6-225ENST00000483506 LARP1Q6PKG0 1096 aaKnown RBP24.95■■□□□ 1.58
HDAC6-225ENST00000483506 SEPT12Q8IYM1 358 aa24.95■■□□□ 1.58
HDAC6-225ENST00000483506 AXIN2Q9Y2T1 843 aa24.95■■□□□ 1.58
HDAC6-225ENST00000483506 CRB1P82279 1406 aa24.94■■□□□ 1.58
HDAC6-225ENST00000483506 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
HDAC6-225ENST00000483506 FAM98CQ17RN3 349 aaKnown RBP24.93■■□□□ 1.58
HDAC6-225ENST00000483506 EP400Q96L91 3159 aa24.93■■□□□ 1.58
HDAC6-225ENST00000483506 BARGINQ6ZT62 677 aa24.92■■□□□ 1.58
HDAC6-225ENST00000483506 WDR17Q8IZU2 1322 aa24.91■■□□□ 1.58
HDAC6-225ENST00000483506 UPF1Q92900 1129 aaKnown RBP eCLIP24.91■■□□□ 1.58
HDAC6-225ENST00000483506 POLR3GLQ9BT43 218 aa24.91■■□□□ 1.58
HDAC6-225ENST00000483506 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
HDAC6-225ENST00000483506 THRAP3Q9Y2W1 955 aaKnown RBP24.9■■□□□ 1.58
HDAC6-225ENST00000483506 TCP11L2Q8N4U5 519 aa24.89■■□□□ 1.58
HDAC6-225ENST00000483506 GGNBP2Q9H3C7 697 aa24.89■■□□□ 1.58
HDAC6-225ENST00000483506 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
HDAC6-225ENST00000483506 CGNL1Q0VF96 1302 aa24.87■■□□□ 1.57
HDAC6-225ENST00000483506 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
HDAC6-225ENST00000483506 WNK3Q9BYP7 1800 aa24.86■■□□□ 1.57
HDAC6-225ENST00000483506 PANK3Q9H999 370 aa24.86■■□□□ 1.57
HDAC6-225ENST00000483506 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
HDAC6-225ENST00000483506 ERBB3P21860 1342 aa24.86■■□□□ 1.57
HDAC6-225ENST00000483506 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
HDAC6-225ENST00000483506 KRT27Q7Z3Y8 459 aa24.85■■□□□ 1.57
HDAC6-225ENST00000483506 MAP3K19Q56UN5 1328 aa24.85■■□□□ 1.57
HDAC6-225ENST00000483506 IP6K1Q92551 441 aa24.84■■□□□ 1.57
HDAC6-225ENST00000483506 USP35Q9P2H5 1018 aa24.84■■□□□ 1.57
HDAC6-225ENST00000483506 TOM1L2Q6ZVM7 507 aa24.83■■□□□ 1.57
HDAC6-225ENST00000483506 CARD10Q9BWT7 1032 aa24.83■■□□□ 1.57
HDAC6-225ENST00000483506 FAM208AQ9UK61 1670 aaKnown RBP24.82■■□□□ 1.56
HDAC6-225ENST00000483506 A0A0G2JS52 829 aa24.82■■□□□ 1.56
HDAC6-225ENST00000483506 MYT1Q01538 1121 aa24.82■■□□□ 1.56
HDAC6-225ENST00000483506 KIF24Q5T7B8 1368 aa24.81■■□□□ 1.56
HDAC6-225ENST00000483506 CCDC7Q96M83 1385 aa24.81■■□□□ 1.56
HDAC6-225ENST00000483506 NSD2O96028 1365 aa24.8■■□□□ 1.56
HDAC6-225ENST00000483506 FBLN1P23142 703 aa24.8■■□□□ 1.56
HDAC6-225ENST00000483506 DISP2A7MBM2 1401 aa24.79■■□□□ 1.56
HDAC6-225ENST00000483506 CSB-PGBD3P0DP91 1061 aa24.79■■□□□ 1.56
HDAC6-225ENST00000483506 HOXC9P31274 260 aa24.79■■□□□ 1.56
HDAC6-225ENST00000483506 LRRC37A3O60309 1634 aa24.79■■□□□ 1.56
HDAC6-225ENST00000483506 PEAK1Q9H792 1746 aa24.78■■□□□ 1.56
HDAC6-225ENST00000483506 ANKRD24Q8TF21 1146 aa24.78■■□□□ 1.56
HDAC6-225ENST00000483506 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
HDAC6-225ENST00000483506 RRS1Q15050 365 aaKnown RBP24.77■■□□□ 1.56
HDAC6-225ENST00000483506 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
HDAC6-225ENST00000483506 AMPHP49418 695 aa24.76■■□□□ 1.55
HDAC6-225ENST00000483506 CCDC125Q86Z20 511 aa24.76■■□□□ 1.55
HDAC6-225ENST00000483506 FLT4P35916 1363 aa24.75■■□□□ 1.55
HDAC6-225ENST00000483506 MAP2P11137 1827 aaKnown RBP24.73■■□□□ 1.55
HDAC6-225ENST00000483506 INSRP06213 1382 aa24.72■■□□□ 1.55
HDAC6-225ENST00000483506 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
HDAC6-225ENST00000483506 PER1O15534 1290 aaPredicted RBP24.71■■□□□ 1.55
HDAC6-225ENST00000483506 NLRP2Q9NX02 1062 aa24.71■■□□□ 1.55
HDAC6-225ENST00000483506 PDE3BQ13370 1112 aa24.7■■□□□ 1.54
HDAC6-225ENST00000483506 AMER1Q5JTC6 1135 aaPredicted RBP24.7■■□□□ 1.54
HDAC6-225ENST00000483506 EMILIN1Q9Y6C2 1016 aa24.69■■□□□ 1.54
HDAC6-225ENST00000483506 RGPD2P0DJD1 1756 aa24.69■■□□□ 1.54
HDAC6-225ENST00000483506 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
HDAC6-225ENST00000483506 DDB1Q16531 1140 aa24.68■■□□□ 1.54
HDAC6-225ENST00000483506 FAM196AQ6ZSG2 479 aa24.68■■□□□ 1.54
HDAC6-225ENST00000483506 TNS2Q63HR2 1409 aa24.68■■□□□ 1.54
HDAC6-225ENST00000483506 SMG6Q86US8 1419 aaKnown RBP24.68■■□□□ 1.54
HDAC6-225ENST00000483506 HSP90AB2PQ58FF8 381 aa24.67■■□□□ 1.54
HDAC6-225ENST00000483506 FAM182BQ5T319 152 aa24.67■■□□□ 1.54
HDAC6-225ENST00000483506 POLKQ9UBT6 870 aa24.67■■□□□ 1.54
HDAC6-225ENST00000483506 LTV1Q96GA3 475 aaPredicted RBP24.66■■□□□ 1.54
HDAC6-225ENST00000483506 TNS1Q9HBL0 1735 aaKnown RBP24.66■■□□□ 1.54
HDAC6-225ENST00000483506 NPC1L1Q9UHC9 1359 aa24.66■■□□□ 1.54
HDAC6-225ENST00000483506 OVOS2A0A0G2JMS6 1433 aa24.65■■□□□ 1.54
HDAC6-225ENST00000483506 BCL9O00512 1426 aa24.65■■□□□ 1.54
HDAC6-225ENST00000483506 IL2RBP14784 551 aa24.65■■□□□ 1.54
HDAC6-225ENST00000483506 NCAPD2Q15021 1401 aa24.62■■□□□ 1.53
HDAC6-225ENST00000483506 MORC1Q86VD1 984 aa24.62■■□□□ 1.53
HDAC6-225ENST00000483506 EXOC5O00471 708 aa24.61■■□□□ 1.53
HDAC6-225ENST00000483506 NBPF6Q5VWK0 638 aa24.61■■□□□ 1.53
HDAC6-225ENST00000483506 NBPF4Q96M43 638 aa24.61■■□□□ 1.53
HDAC6-225ENST00000483506 SBF2Q86WG5 1849 aa24.61■■□□□ 1.53
HDAC6-225ENST00000483506 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
HDAC6-225ENST00000483506 MARCH10Q8NA82 808 aaPredicted RBP24.6■■□□□ 1.53
HDAC6-225ENST00000483506 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
HDAC6-225ENST00000483506 MEGF6O75095 1541 aa24.58■■□□□ 1.53
HDAC6-225ENST00000483506 PPM1GO15355 546 aaPredicted RBP24.58■■□□□ 1.53
HDAC6-225ENST00000483506 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
HDAC6-225ENST00000483506 SHANK3Q9BYB0 1731 aa24.55■■□□□ 1.52
HDAC6-225ENST00000483506 TRIM37O94972 964 aa24.55■■□□□ 1.52
HDAC6-225ENST00000483506 BAG6P46379 1132 aa24.54■■□□□ 1.52
HDAC6-225ENST00000483506 DEFB132Q7Z7B7 95 aa24.54■■□□□ 1.52
HDAC6-225ENST00000483506 EIF4A2Q14240 407 aaKnown RBP24.52■■□□□ 1.52
HDAC6-225ENST00000483506 USHBP1Q8N6Y0 703 aa24.52■■□□□ 1.52
HDAC6-225ENST00000483506 CC2D1BQ5T0F9 858 aaKnown RBP24.51■■□□□ 1.51
HDAC6-225ENST00000483506 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
HDAC6-225ENST00000483506 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
HDAC6-225ENST00000483506 EYA1Q99502 592 aa24.5■■□□□ 1.51
HDAC6-225ENST00000483506 PLEKHG2Q9H7P9 1386 aa24.5■■□□□ 1.51
HDAC6-225ENST00000483506 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
HDAC6-225ENST00000483506 PKD1L3Q7Z443 1732 aa24.49■■□□□ 1.51
HDAC6-225ENST00000483506 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
HDAC6-225ENST00000483506 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms