RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 STK17AQ9UEE5 414 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 NR6A1Q15406 480 aa7.08□□□□□ -1.28
LRCH3-217ENST00000483442 SKIV2LQ15477 1246 aaKnown RBP7.08□□□□□ -1.28
LRCH3-217ENST00000483442 VASH1Q7L8A9 365 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-217ENST00000483442 TRMT44Q8IYL2 757 aaKnown RBP7.08□□□□□ -1.28
LRCH3-217ENST00000483442 ARMC2Q8NEN0 867 aa7.08□□□□□ -1.28
LRCH3-217ENST00000483442 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
LRCH3-217ENST00000483442 NBPF14Q5TI25 921 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 IRF7Q92985 503 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 MAP4K5Q9Y4K4 846 aa7.07□□□□□ -1.28
LRCH3-217ENST00000483442 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
LRCH3-217ENST00000483442 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
LRCH3-217ENST00000483442 SMARCA2P51531 1590 aa7.06□□□□□ -1.28
LRCH3-217ENST00000483442 THOC2Q8NI27 1593 aaKnown RBP7.05□□□□□ -1.28
LRCH3-217ENST00000483442 PDS5BQ9NTI5 1447 aa7.05□□□□□ -1.28
LRCH3-217ENST00000483442 CBLBQ13191 982 aa7.05□□□□□ -1.28
LRCH3-217ENST00000483442 PPP2R2DQ66LE6 453 aa7.05□□□□□ -1.28
LRCH3-217ENST00000483442 FKBPLQ9UIM3 349 aa7.05□□□□□ -1.28
LRCH3-217ENST00000483442 DNMT3LQ9UJW3 386 aa7.05□□□□□ -1.28
LRCH3-217ENST00000483442 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-217ENST00000483442 BMP2P12643 396 aa7.04□□□□□ -1.28
LRCH3-217ENST00000483442 CCDC116Q8IYX3 515 aa7.04□□□□□ -1.28
LRCH3-217ENST00000483442 HMX1Q9NP08 348 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-217ENST00000483442 MAN1A2O60476 641 aa7.03□□□□□ -1.28
LRCH3-217ENST00000483442 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-217ENST00000483442 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
LRCH3-217ENST00000483442 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
LRCH3-217ENST00000483442 ARHGAP9Q9BRR9 750 aa7.03□□□□□ -1.28
LRCH3-217ENST00000483442 PPFIA3O75145 1194 aa7.02□□□□□ -1.29
LRCH3-217ENST00000483442 AP1G2O75843 785 aa7.02□□□□□ -1.29
LRCH3-217ENST00000483442 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
LRCH3-217ENST00000483442 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
LRCH3-217ENST00000483442 VSIG8P0DPA2 414 aa7.01□□□□□ -1.29
LRCH3-217ENST00000483442 CYB5RLQ6IPT4 315 aa7.01□□□□□ -1.29
LRCH3-217ENST00000483442 KCTD15Q96SI1 283 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-217ENST00000483442 EMILIN1Q9Y6C2 1016 aa7.01□□□□□ -1.29
LRCH3-217ENST00000483442 HMGXB3Q12766 1538 aa7.01□□□□□ -1.29
LRCH3-217ENST00000483442 FIGNL2A6NMB9 653 aa7□□□□□ -1.29
LRCH3-217ENST00000483442 Q6ZVU0 165 aa7□□□□□ -1.29
LRCH3-217ENST00000483442 GPR161Q8N6U8 529 aaKnown RBP7□□□□□ -1.29
LRCH3-217ENST00000483442 DDRGK1Q96HY6 314 aa7□□□□□ -1.29
LRCH3-217ENST00000483442 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
LRCH3-217ENST00000483442 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
LRCH3-217ENST00000483442 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
LRCH3-217ENST00000483442 AGBL1Q96MI9 1066 aa6.99□□□□□ -1.29
LRCH3-217ENST00000483442 TSEN34Q9BSV6 310 aaKnown RBP6.99□□□□□ -1.29
LRCH3-217ENST00000483442 TMPRSS4Q9NRS4 437 aa6.99□□□□□ -1.29
LRCH3-217ENST00000483442 ATP1B4Q9UN42 357 aaPredicted RBP6.99□□□□□ -1.29
LRCH3-217ENST00000483442 KIF21AQ7Z4S6 1674 aa6.98□□□□□ -1.29
LRCH3-217ENST00000483442 UPP2O95045 317 aa6.98□□□□□ -1.29
LRCH3-217ENST00000483442 USP17L8P0C7I0 530 aa6.98□□□□□ -1.29
LRCH3-217ENST00000483442 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
LRCH3-217ENST00000483442 CADPSQ9ULU8 1353 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 RFC5P40937 340 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 KRT76Q01546 638 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 MRC2Q9UBG0 1479 aa6.97□□□□□ -1.29
LRCH3-217ENST00000483442 SPINT1O43278 529 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 SLC24A1O60721 1099 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-217ENST00000483442 PTSQ03393 145 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 TRIM34Q9BYJ4 488 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 PGPEP1Q9NXJ5 209 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 SMARCA4P51532 1647 aa6.96□□□□□ -1.3
LRCH3-217ENST00000483442 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.3
LRCH3-217ENST00000483442 BAZ1AQ9NRL2 1556 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-217ENST00000483442 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
LRCH3-217ENST00000483442 RELBQ01201 579 aa6.95□□□□□ -1.3
LRCH3-217ENST00000483442 PTK2Q05397 1052 aa6.95□□□□□ -1.3
LRCH3-217ENST00000483442 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-217ENST00000483442 BCANQ96GW7 911 aa6.95□□□□□ -1.3
LRCH3-217ENST00000483442 RAB15P59190 212 aa6.94□□□□□ -1.3
LRCH3-217ENST00000483442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.94□□□□□ -1.3
LRCH3-217ENST00000483442 ZNF784Q8NCA9 323 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-217ENST00000483442 INSM2Q96T92 566 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-217ENST00000483442 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-217ENST00000483442 LILRA1O75019 489 aa6.93□□□□□ -1.3
LRCH3-217ENST00000483442 CDV3Q9UKY7 258 aaKnown RBP6.93□□□□□ -1.3
LRCH3-217ENST00000483442 GPSM3Q9Y4H4 160 aa6.93□□□□□ -1.3
LRCH3-217ENST00000483442 ERVH48-1M5A8F1 160 aa6.92□□□□□ -1.3
LRCH3-217ENST00000483442 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
LRCH3-217ENST00000483442 WDR62O43379 1518 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 RIMBP3CA6NJZ7 1639 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 RIMBP3BA6NNM3 1639 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 RIMBP3Q9UFD9 1639 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 ESPNB1AK53 854 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 DHX9Q08211 1270 aaKnown RBP6.91□□□□□ -1.3
LRCH3-217ENST00000483442 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 RNF217Q8TC41 542 aa6.91□□□□□ -1.3
LRCH3-217ENST00000483442 GJD4Q96KN9 370 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-217ENST00000483442 SENP3-EIF4A1A0A087X0R7 540 aa6.9□□□□□ -1.3
LRCH3-217ENST00000483442 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
LRCH3-217ENST00000483442 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-217ENST00000483442 DZIP3Q86Y13 1208 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms