RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
SNHG11-215ENST00000483342 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
SNHG11-215ENST00000483342 RTL1A6NKG5 1358 aa22.75■■□□□ 1.23
SNHG11-215ENST00000483342 CCDC184Q52MB2 194 aa22.75■■□□□ 1.23
SNHG11-215ENST00000483342 LTV1Q96GA3 475 aaPredicted RBP22.75■■□□□ 1.23
SNHG11-215ENST00000483342 DIAPH1O60610 1272 aaKnown RBP22.74■■□□□ 1.23
SNHG11-215ENST00000483342 SMG6Q86US8 1419 aaKnown RBP22.74■■□□□ 1.23
SNHG11-215ENST00000483342 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
SNHG11-215ENST00000483342 C8orf37Q96NL8 207 aa22.74■■□□□ 1.23
SNHG11-215ENST00000483342 EVA1CP58658 441 aa22.73■■□□□ 1.23
SNHG11-215ENST00000483342 INSRP06213 1382 aa22.73■■□□□ 1.23
SNHG11-215ENST00000483342 LRP6O75581 1613 aa22.73■■□□□ 1.23
SNHG11-215ENST00000483342 ABCA3Q99758 1704 aa22.73■■□□□ 1.23
SNHG11-215ENST00000483342 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
SNHG11-215ENST00000483342 NUDCQ9Y266 331 aa22.72■■□□□ 1.23
SNHG11-215ENST00000483342 CDK12Q9NYV4 1490 aaPredicted RBP22.71■■□□□ 1.23
SNHG11-215ENST00000483342 ANKRD24Q8TF21 1146 aa22.71■■□□□ 1.23
SNHG11-215ENST00000483342 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
SNHG11-215ENST00000483342 EIF4A2Q14240 407 aaKnown RBP22.7■■□□□ 1.22
SNHG11-215ENST00000483342 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
SNHG11-215ENST00000483342 STRN4Q9NRL3 753 aa22.69■■□□□ 1.22
SNHG11-215ENST00000483342 LTN1O94822 1766 aa22.69■■□□□ 1.22
SNHG11-215ENST00000483342 U2SURPO15042 1029 aaKnown RBP22.68■■□□□ 1.22
SNHG11-215ENST00000483342 IL13P35225 146 aa22.68■■□□□ 1.22
SNHG11-215ENST00000483342 PEAK1Q9H792 1746 aa22.68■■□□□ 1.22
SNHG11-215ENST00000483342 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNHG11-215ENST00000483342 ERBB3P21860 1342 aa22.66■■□□□ 1.22
SNHG11-215ENST00000483342 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
SNHG11-215ENST00000483342 FNBP4Q8N3X1 1017 aaPredicted RBP22.65■■□□□ 1.22
SNHG11-215ENST00000483342 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
SNHG11-215ENST00000483342 ABCC6O95255 1503 aa22.65■■□□□ 1.22
SNHG11-215ENST00000483342 COL14A1Q05707 1796 aaKnown RBP22.64■■□□□ 1.21
SNHG11-215ENST00000483342 U2AF1L5P0DN76 240 aaPredicted RBP22.63■■□□□ 1.21
SNHG11-215ENST00000483342 U2AF1Q01081 240 aaKnown RBP eCLIP22.63■■□□□ 1.21
SNHG11-215ENST00000483342 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
SNHG11-215ENST00000483342 UNC5CLQ8IV45 518 aa22.63■■□□□ 1.21
SNHG11-215ENST00000483342 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
SNHG11-215ENST00000483342 USP21Q9UK80 565 aa22.63■■□□□ 1.21
SNHG11-215ENST00000483342 COL18A1P39060 1754 aa22.63■■□□□ 1.21
SNHG11-215ENST00000483342 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
SNHG11-215ENST00000483342 EYA1Q99502 592 aa22.62■■□□□ 1.21
SNHG11-215ENST00000483342 WDR17Q8IZU2 1322 aa22.62■■□□□ 1.21
SNHG11-215ENST00000483342 COL3A1P02461 1466 aaPredicted RBP22.62■■□□□ 1.21
SNHG11-215ENST00000483342 NBPF6Q5VWK0 638 aa22.62■■□□□ 1.21
SNHG11-215ENST00000483342 LARP1Q6PKG0 1096 aaKnown RBP22.62■■□□□ 1.21
SNHG11-215ENST00000483342 NBPF4Q96M43 638 aa22.62■■□□□ 1.21
SNHG11-215ENST00000483342 AFF2P51816 1311 aa22.61■■□□□ 1.21
SNHG11-215ENST00000483342 COL5A2P05997 1499 aaPredicted RBP22.61■■□□□ 1.21
SNHG11-215ENST00000483342 SLIT2O94813 1529 aa22.6■■□□□ 1.21
SNHG11-215ENST00000483342 LMO7Q8WWI1 1683 aa22.6■■□□□ 1.21
SNHG11-215ENST00000483342 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
SNHG11-215ENST00000483342 RGS17Q9UGC6 210 aaPredicted RBP22.59■■□□□ 1.21
SNHG11-215ENST00000483342 ADAMTS8Q9UP79 889 aa22.59■■□□□ 1.21
SNHG11-215ENST00000483342 HMOX1P09601 288 aa22.58■■□□□ 1.21
SNHG11-215ENST00000483342 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
SNHG11-215ENST00000483342 USHBP1Q8N6Y0 703 aa22.58■■□□□ 1.21
SNHG11-215ENST00000483342 USP35Q9P2H5 1018 aa22.57■■□□□ 1.2
SNHG11-215ENST00000483342 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
SNHG11-215ENST00000483342 IGSF1Q8N6C5 1336 aa22.57■■□□□ 1.2
SNHG11-215ENST00000483342 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
SNHG11-215ENST00000483342 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
SNHG11-215ENST00000483342 BCL9LQ86UU0 1499 aa22.56■■□□□ 1.2
SNHG11-215ENST00000483342 FCHSD2O94868 740 aa22.55■■□□□ 1.2
SNHG11-215ENST00000483342 VPS72Q15906 364 aa22.54■■□□□ 1.2
SNHG11-215ENST00000483342 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
SNHG11-215ENST00000483342 CRB1P82279 1406 aa22.54■■□□□ 1.2
SNHG11-215ENST00000483342 PLCH1Q4KWH8 1693 aa22.54■■□□□ 1.2
SNHG11-215ENST00000483342 ZNF772Q68DY9 489 aaPredicted RBP22.53■■□□□ 1.2
SNHG11-215ENST00000483342 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
SNHG11-215ENST00000483342 QTRT2Q9H974 415 aaKnown RBP22.52■■□□□ 1.2
SNHG11-215ENST00000483342 TRPC5Q9UL62 973 aaPredicted RBP22.52■■□□□ 1.2
SNHG11-215ENST00000483342 NEFMP07197 916 aa22.52■■□□□ 1.19
SNHG11-215ENST00000483342 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.19
SNHG11-215ENST00000483342 RAPGEF4Q8WZA2 1011 aa22.52■■□□□ 1.19
SNHG11-215ENST00000483342 SPATA31A5Q5VU36 1347 aa22.51■■□□□ 1.19
SNHG11-215ENST00000483342 SPATA31A7Q8IWB4 1347 aa22.51■■□□□ 1.19
SNHG11-215ENST00000483342 POTEAQ6S8J7 498 aa22.51■■□□□ 1.19
SNHG11-215ENST00000483342 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
SNHG11-215ENST00000483342 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
SNHG11-215ENST00000483342 SPATA31A1Q5TZJ5 1347 aa22.5■■□□□ 1.19
SNHG11-215ENST00000483342 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
SNHG11-215ENST00000483342 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
SNHG11-215ENST00000483342 THRAP3Q9Y2W1 955 aaKnown RBP22.49■■□□□ 1.19
SNHG11-215ENST00000483342 TATP17735 454 aaPredicted RBP22.48■■□□□ 1.19
SNHG11-215ENST00000483342 KDRP35968 1356 aa22.47■■□□□ 1.19
SNHG11-215ENST00000483342 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
SNHG11-215ENST00000483342 IL2RBP14784 551 aa22.47■■□□□ 1.19
SNHG11-215ENST00000483342 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
SNHG11-215ENST00000483342 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
SNHG11-215ENST00000483342 MAPK8IP3Q9UPT6 1336 aa22.46■■□□□ 1.19
SNHG11-215ENST00000483342 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
SNHG11-215ENST00000483342 FAM208AQ9UK61 1670 aaKnown RBP22.45■■□□□ 1.18
SNHG11-215ENST00000483342 RGPD1P0DJD0 1748 aa22.44■■□□□ 1.18
SNHG11-215ENST00000483342 RGPD2P0DJD1 1756 aa22.44■■□□□ 1.18
SNHG11-215ENST00000483342 NCAPD2Q15021 1401 aa22.44■■□□□ 1.18
SNHG11-215ENST00000483342 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
SNHG11-215ENST00000483342 CDCA7Q9BWT1 371 aaPredicted RBP22.44■■□□□ 1.18
SNHG11-215ENST00000483342 ATRNO75882 1429 aa22.43■■□□□ 1.18
SNHG11-215ENST00000483342 FAM98CQ17RN3 349 aaKnown RBP22.43■■□□□ 1.18
SNHG11-215ENST00000483342 PLEKHO1Q53GL0 409 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms