RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
VARS-226ENST00000483275 RGPD3A6NKT7 1758 aaPredicted RBP19.98■□□□□ 0.79
VARS-226ENST00000483275 RGPD4Q7Z3J3 1758 aa19.98■□□□□ 0.79
VARS-226ENST00000483275 NFAT5O94916 1531 aa19.98■□□□□ 0.79
VARS-226ENST00000483275 TOM1L2Q6ZVM7 507 aa19.98■□□□□ 0.79
VARS-226ENST00000483275 TTC21BQ7Z4L5 1316 aa19.97■□□□□ 0.79
VARS-226ENST00000483275 LTN1O94822 1766 aa19.95■□□□□ 0.78
VARS-226ENST00000483275 WDR17Q8IZU2 1322 aa19.95■□□□□ 0.78
VARS-226ENST00000483275 DDB1Q16531 1140 aa19.94■□□□□ 0.78
VARS-226ENST00000483275 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
VARS-226ENST00000483275 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
VARS-226ENST00000483275 ARHGEF25Q86VW2 580 aa19.92■□□□□ 0.78
VARS-226ENST00000483275 MARCH10Q8NA82 808 aaPredicted RBP19.92■□□□□ 0.78
VARS-226ENST00000483275 ANO8Q9HCE9 1232 aaPredicted RBP19.92■□□□□ 0.78
VARS-226ENST00000483275 CSB-PGBD3P0DP91 1061 aa19.91■□□□□ 0.78
VARS-226ENST00000483275 NBPF14Q5TI25 921 aa19.91■□□□□ 0.78
VARS-226ENST00000483275 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
VARS-226ENST00000483275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.9■□□□□ 0.78
VARS-226ENST00000483275 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
VARS-226ENST00000483275 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
VARS-226ENST00000483275 NME9Q86XW9 330 aa19.87■□□□□ 0.77
VARS-226ENST00000483275 KCNH5Q8NCM2 988 aa19.87■□□□□ 0.77
VARS-226ENST00000483275 PDGFDQ9GZP0 370 aaPredicted RBP19.87■□□□□ 0.77
VARS-226ENST00000483275 ZNF692Q9BU19 519 aaPredicted RBP19.86■□□□□ 0.77
VARS-226ENST00000483275 MYOM1P52179 1685 aa19.86■□□□□ 0.77
VARS-226ENST00000483275 ABCC6O95255 1503 aa19.86■□□□□ 0.77
VARS-226ENST00000483275 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
VARS-226ENST00000483275 NHSQ6T4R5 1651 aa19.85■□□□□ 0.77
VARS-226ENST00000483275 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
VARS-226ENST00000483275 BCL11BQ9C0K0 894 aaPredicted RBP19.85■□□□□ 0.77
VARS-226ENST00000483275 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
VARS-226ENST00000483275 SPON1Q9HCB6 807 aa19.84■□□□□ 0.77
VARS-226ENST00000483275 PPP1R1BQ9UD71 204 aaPredicted RBP19.84■□□□□ 0.77
VARS-226ENST00000483275 KCNQ2O43526 872 aa19.83■□□□□ 0.77
VARS-226ENST00000483275 PROM2Q8N271 834 aa19.83■□□□□ 0.77
VARS-226ENST00000483275 TMC1Q8TDI8 760 aa19.83■□□□□ 0.77
VARS-226ENST00000483275 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.77
VARS-226ENST00000483275 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.76
VARS-226ENST00000483275 BTAF1O14981 1849 aa19.82■□□□□ 0.76
VARS-226ENST00000483275 C11orf95C9JLR9 678 aaPredicted RBP19.82■□□□□ 0.76
VARS-226ENST00000483275 PLSCR1O15162 318 aa19.82■□□□□ 0.76
VARS-226ENST00000483275 CDCA7Q9BWT1 371 aaPredicted RBP19.81■□□□□ 0.76
VARS-226ENST00000483275 CCDC7Q96M83 1385 aa19.81■□□□□ 0.76
VARS-226ENST00000483275 BCL9O00512 1426 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 ZBTB7AO95365 584 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 ACSBG1Q96GR2 724 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 SLC12A5Q9H2X9 1139 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 A0A1W2PP64 1363 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
VARS-226ENST00000483275 ERBB3P21860 1342 aa19.79■□□□□ 0.76
VARS-226ENST00000483275 NLRP2Q9NX02 1062 aa19.79■□□□□ 0.76
VARS-226ENST00000483275 EXOC5O00471 708 aa19.78■□□□□ 0.76
VARS-226ENST00000483275 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
VARS-226ENST00000483275 EDC4Q6P2E9 1401 aaKnown RBP19.77■□□□□ 0.76
VARS-226ENST00000483275 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
VARS-226ENST00000483275 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
VARS-226ENST00000483275 PAPPAQ13219 1627 aa19.76■□□□□ 0.75
VARS-226ENST00000483275 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
VARS-226ENST00000483275 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
VARS-226ENST00000483275 HDGFL2Q7Z4V5 671 aaPredicted RBP19.75■□□□□ 0.75
VARS-226ENST00000483275 YY1P25490 414 aa19.74■□□□□ 0.75
VARS-226ENST00000483275 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
VARS-226ENST00000483275 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
VARS-226ENST00000483275 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
VARS-226ENST00000483275 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
VARS-226ENST00000483275 IL2RBP14784 551 aa19.72■□□□□ 0.75
VARS-226ENST00000483275 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
VARS-226ENST00000483275 SHANK3Q9BYB0 1731 aa19.72■□□□□ 0.75
VARS-226ENST00000483275 PTGER2P43116 358 aa19.71■□□□□ 0.75
VARS-226ENST00000483275 TUBGCP6Q96RT7 1819 aa19.7■□□□□ 0.74
VARS-226ENST00000483275 FBLN1P23142 703 aa19.7■□□□□ 0.74
VARS-226ENST00000483275 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
VARS-226ENST00000483275 TERF2IPQ9NYB0 399 aa19.69■□□□□ 0.74
VARS-226ENST00000483275 UTRNP46939 3433 aa19.69■□□□□ 0.74
VARS-226ENST00000483275 TESK2Q96S53 571 aa19.67■□□□□ 0.74
VARS-226ENST00000483275 ST20-MTHFSA0A0A6YYL1 179 aa19.66■□□□□ 0.74
VARS-226ENST00000483275 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
VARS-226ENST00000483275 DDX54Q8TDD1 881 aaKnown RBP19.65■□□□□ 0.74
VARS-226ENST00000483275 MAP3K19Q56UN5 1328 aa19.65■□□□□ 0.74
VARS-226ENST00000483275 IP6K1Q92551 441 aa19.64■□□□□ 0.73
VARS-226ENST00000483275 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
VARS-226ENST00000483275 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.73
VARS-226ENST00000483275 MEGF6O75095 1541 aa19.64■□□□□ 0.73
VARS-226ENST00000483275 KIF20BQ96Q89 1820 aa19.64■□□□□ 0.73
VARS-226ENST00000483275 KCNQ4P56696 695 aa19.63■□□□□ 0.73
VARS-226ENST00000483275 DCAF8L1A6NGE4 600 aa19.62■□□□□ 0.73
VARS-226ENST00000483275 MTFR1LQ9H019 292 aa19.62■□□□□ 0.73
VARS-226ENST00000483275 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
VARS-226ENST00000483275 COG3Q96JB2 828 aa19.61■□□□□ 0.73
VARS-226ENST00000483275 SGIP1Q9BQI5 828 aa19.61■□□□□ 0.73
VARS-226ENST00000483275 LY75O60449 1722 aa19.6■□□□□ 0.73
VARS-226ENST00000483275 HOXC9P31274 260 aa19.6■□□□□ 0.73
VARS-226ENST00000483275 SYTL4Q96C24 671 aaPredicted RBP19.6■□□□□ 0.73
VARS-226ENST00000483275 AMPHP49418 695 aa19.59■□□□□ 0.73
VARS-226ENST00000483275 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
VARS-226ENST00000483275 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
VARS-226ENST00000483275 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
VARS-226ENST00000483275 CHD4Q14839 1912 aa19.59■□□□□ 0.73
VARS-226ENST00000483275 NSD2O96028 1365 aa19.58■□□□□ 0.73
VARS-226ENST00000483275 ANKRD36BQ8N2N9 1353 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms