RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
SYN3-212ENST00000483062 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
SYN3-212ENST00000483062 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
SYN3-212ENST00000483062 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
SYN3-212ENST00000483062 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
SYN3-212ENST00000483062 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
SYN3-212ENST00000483062 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
SYN3-212ENST00000483062 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
SYN3-212ENST00000483062 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
SYN3-212ENST00000483062 GCP02774 474 aa11.61□□□□□ -0.55
SYN3-212ENST00000483062 MAP3K5Q99683 1374 aa11.61□□□□□ -0.55
SYN3-212ENST00000483062 ACEP12821 1306 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 PARP4Q9UKK3 1724 aaKnown RBP11.6□□□□□ -0.55
SYN3-212ENST00000483062 MYOM1P52179 1685 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 SLC15A2Q16348 729 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
SYN3-212ENST00000483062 MTFR1LQ9H019 292 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 CRB1P82279 1406 aa11.6□□□□□ -0.55
SYN3-212ENST00000483062 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
SYN3-212ENST00000483062 DDB1Q16531 1140 aa11.58□□□□□ -0.56
SYN3-212ENST00000483062 TXNRD1Q16881 649 aa11.58□□□□□ -0.56
SYN3-212ENST00000483062 ABTB2Q8N961 1025 aa11.58□□□□□ -0.56
SYN3-212ENST00000483062 CDK19Q9BWU1 502 aa11.58□□□□□ -0.56
SYN3-212ENST00000483062 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
SYN3-212ENST00000483062 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
SYN3-212ENST00000483062 ARXQ96QS3 562 aa11.56□□□□□ -0.56
SYN3-212ENST00000483062 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
SYN3-212ENST00000483062 RAB3GAP2Q9H2M9 1393 aa11.55□□□□□ -0.56
SYN3-212ENST00000483062 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
SYN3-212ENST00000483062 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
SYN3-212ENST00000483062 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
SYN3-212ENST00000483062 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
SYN3-212ENST00000483062 ARHGEF28Q8N1W1 1705 aaKnown RBP11.54□□□□□ -0.56
SYN3-212ENST00000483062 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
SYN3-212ENST00000483062 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
SYN3-212ENST00000483062 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
SYN3-212ENST00000483062 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
SYN3-212ENST00000483062 ITSN1Q15811 1721 aa11.52□□□□□ -0.56
SYN3-212ENST00000483062 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
SYN3-212ENST00000483062 CHD4Q14839 1912 aa11.52□□□□□ -0.57
SYN3-212ENST00000483062 TOPAZ1Q8N9V7 1692 aa11.52□□□□□ -0.57
SYN3-212ENST00000483062 KIAA1210Q9ULL0 1709 aa11.52□□□□□ -0.57
SYN3-212ENST00000483062 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
SYN3-212ENST00000483062 CARD10Q9BWT7 1032 aa11.51□□□□□ -0.57
SYN3-212ENST00000483062 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
SYN3-212ENST00000483062 SLIT3O75094 1523 aa11.5□□□□□ -0.57
SYN3-212ENST00000483062 GPR162Q16538 588 aa11.5□□□□□ -0.57
SYN3-212ENST00000483062 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
SYN3-212ENST00000483062 COL18A1P39060 1754 aa11.49□□□□□ -0.57
SYN3-212ENST00000483062 NLRP6P59044 892 aa11.49□□□□□ -0.57
SYN3-212ENST00000483062 ZNF827Q17R98 1081 aa11.49□□□□□ -0.57
SYN3-212ENST00000483062 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
SYN3-212ENST00000483062 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
SYN3-212ENST00000483062 EXOC5O00471 708 aa11.48□□□□□ -0.57
SYN3-212ENST00000483062 ABCB7O75027 752 aa11.48□□□□□ -0.57
SYN3-212ENST00000483062 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
SYN3-212ENST00000483062 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
SYN3-212ENST00000483062 USP6P35125 1406 aa11.47□□□□□ -0.57
SYN3-212ENST00000483062 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
SYN3-212ENST00000483062 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
SYN3-212ENST00000483062 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
SYN3-212ENST00000483062 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
SYN3-212ENST00000483062 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SYN3-212ENST00000483062 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
SYN3-212ENST00000483062 CABP1Q9NZU7 370 aa11.45□□□□□ -0.58
SYN3-212ENST00000483062 CCDC7Q96M83 1385 aa11.44□□□□□ -0.58
SYN3-212ENST00000483062 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
SYN3-212ENST00000483062 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
SYN3-212ENST00000483062 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
SYN3-212ENST00000483062 HSPA6P17066 643 aa11.43□□□□□ -0.58
SYN3-212ENST00000483062 ACSBG1Q96GR2 724 aa11.43□□□□□ -0.58
SYN3-212ENST00000483062 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
SYN3-212ENST00000483062 GRIN3BO60391 1043 aa11.42□□□□□ -0.58
SYN3-212ENST00000483062 SRPK2P78362 688 aaKnown RBP11.42□□□□□ -0.58
SYN3-212ENST00000483062 NBPF1Q3BBV0 1214 aa11.42□□□□□ -0.58
SYN3-212ENST00000483062 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
SYN3-212ENST00000483062 WNK3Q9BYP7 1800 aa11.42□□□□□ -0.58
SYN3-212ENST00000483062 NHSQ6T4R5 1651 aa11.41□□□□□ -0.58
SYN3-212ENST00000483062 SLC27A3Q5K4L6 730 aa11.41□□□□□ -0.58
SYN3-212ENST00000483062 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
SYN3-212ENST00000483062 ADCY9O60503 1353 aa11.41□□□□□ -0.58
SYN3-212ENST00000483062 ABCC6O95255 1503 aa11.4□□□□□ -0.58
SYN3-212ENST00000483062 TTC21BQ7Z4L5 1316 aa11.4□□□□□ -0.58
SYN3-212ENST00000483062 POLD1P28340 1107 aa11.4□□□□□ -0.58
SYN3-212ENST00000483062 POTEHQ6S545 545 aa11.4□□□□□ -0.58
SYN3-212ENST00000483062 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
SYN3-212ENST00000483062 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
SYN3-212ENST00000483062 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
SYN3-212ENST00000483062 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
SYN3-212ENST00000483062 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
SYN3-212ENST00000483062 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
SYN3-212ENST00000483062 NFAT5O94916 1531 aa11.39□□□□□ -0.59
SYN3-212ENST00000483062 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
SYN3-212ENST00000483062 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
SYN3-212ENST00000483062 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
SYN3-212ENST00000483062 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
SYN3-212ENST00000483062 ERBB3P21860 1342 aa11.37□□□□□ -0.59
SYN3-212ENST00000483062 IL2RBP14784 551 aa11.37□□□□□ -0.59
SYN3-212ENST00000483062 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms