RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MTMR14Q8NCE2 650 aa8.18□□□□□ -1.1
GTF3A-207ENST00000482655 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
GTF3A-207ENST00000482655 OCSTAMPQ9BR26 566 aa8.18□□□□□ -1.1
GTF3A-207ENST00000482655 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
GTF3A-207ENST00000482655 ZBBXA8MT70 800 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
GTF3A-207ENST00000482655 SCARF1Q14162 830 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 ITPKCQ96DU7 683 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-207ENST00000482655 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
GTF3A-207ENST00000482655 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
GTF3A-207ENST00000482655 TRIM46Q7Z4K8 759 aa8.16□□□□□ -1.1
GTF3A-207ENST00000482655 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
GTF3A-207ENST00000482655 UPP2O95045 317 aa8.15□□□□□ -1.1
GTF3A-207ENST00000482655 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
GTF3A-207ENST00000482655 FBXO45P0C2W1 286 aa8.14□□□□□ -1.11
GTF3A-207ENST00000482655 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
GTF3A-207ENST00000482655 RAB15P59190 212 aa8.14□□□□□ -1.11
GTF3A-207ENST00000482655 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
GTF3A-207ENST00000482655 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
GTF3A-207ENST00000482655 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
GTF3A-207ENST00000482655 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
GTF3A-207ENST00000482655 PCDHB9Q9Y5E1 797 aa8.14□□□□□ -1.11
GTF3A-207ENST00000482655 ZFP42Q96MM3 310 aa8.13□□□□□ -1.11
GTF3A-207ENST00000482655 PURBQ96QR8 312 aaKnown RBP8.13□□□□□ -1.11
GTF3A-207ENST00000482655 NR1H3Q13133 447 aa8.12□□□□□ -1.11
GTF3A-207ENST00000482655 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
GTF3A-207ENST00000482655 BMP2P12643 396 aa8.11□□□□□ -1.11
GTF3A-207ENST00000482655 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
GTF3A-207ENST00000482655 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
GTF3A-207ENST00000482655 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
GTF3A-207ENST00000482655 TSEN34Q9BSV6 310 aaKnown RBP8.1□□□□□ -1.11
GTF3A-207ENST00000482655 MCCD1P59942 119 aaPredicted RBP8.09□□□□□ -1.11
GTF3A-207ENST00000482655 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
GTF3A-207ENST00000482655 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
GTF3A-207ENST00000482655 ESPNB1AK53 854 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 ERVH48-1M5A8F1 160 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 GPR37L1O60883 481 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 CBLBQ13191 982 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 MCM6Q14566 821 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
GTF3A-207ENST00000482655 MAN1A2O60476 641 aa8.06□□□□□ -1.12
GTF3A-207ENST00000482655 Q6ZVU0 165 aa8.06□□□□□ -1.12
GTF3A-207ENST00000482655 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
GTF3A-207ENST00000482655 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
GTF3A-207ENST00000482655 TMPRSS4Q9NRS4 437 aa8.06□□□□□ -1.12
GTF3A-207ENST00000482655 GIGYF1O75420 1035 aaPredicted RBP8.05□□□□□ -1.12
GTF3A-207ENST00000482655 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
GTF3A-207ENST00000482655 ABL2P42684 1182 aa8.04□□□□□ -1.12
GTF3A-207ENST00000482655 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
GTF3A-207ENST00000482655 WFS1O76024 890 aa8.03□□□□□ -1.12
GTF3A-207ENST00000482655 RELBQ01201 579 aa8.03□□□□□ -1.12
GTF3A-207ENST00000482655 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
GTF3A-207ENST00000482655 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
GTF3A-207ENST00000482655 TTLL8A6PVC2 850 aa8.02□□□□□ -1.13
GTF3A-207ENST00000482655 TERTO14746 1132 aaKnown RBP8.02□□□□□ -1.13
GTF3A-207ENST00000482655 ADH1AP07327 375 aa8.02□□□□□ -1.13
GTF3A-207ENST00000482655 TREML4Q6UXN2 200 aa8.02□□□□□ -1.13
GTF3A-207ENST00000482655 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
GTF3A-207ENST00000482655 AGBL1Q96MI9 1066 aa8.02□□□□□ -1.13
GTF3A-207ENST00000482655 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
GTF3A-207ENST00000482655 NXF1Q9UBU9 619 aaKnown RBP8.02□□□□□ -1.13
GTF3A-207ENST00000482655 SOBPA7XYQ1 873 aa8.01□□□□□ -1.13
GTF3A-207ENST00000482655 WWC1Q8IX03 1113 aa8.01□□□□□ -1.13
GTF3A-207ENST00000482655 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
GTF3A-207ENST00000482655 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
GTF3A-207ENST00000482655 SPINT1O43278 529 aa8□□□□□ -1.13
GTF3A-207ENST00000482655 LILRA1O75019 489 aa8□□□□□ -1.13
GTF3A-207ENST00000482655 FLIIQ13045 1269 aa8□□□□□ -1.13
GTF3A-207ENST00000482655 IRF5Q13568 498 aa8□□□□□ -1.13
GTF3A-207ENST00000482655 WASHC4Q2M389 1173 aa8□□□□□ -1.13
GTF3A-207ENST00000482655 POLMQ9NP87 494 aaPredicted RBP8□□□□□ -1.13
GTF3A-207ENST00000482655 RAD21O60216 631 aa7.99□□□□□ -1.13
GTF3A-207ENST00000482655 VAC14Q08AM6 782 aa7.99□□□□□ -1.13
GTF3A-207ENST00000482655 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
GTF3A-207ENST00000482655 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.99□□□□□ -1.132e-7■■■□□ 17.2
GTF3A-207ENST00000482655 NPAS3Q8IXF0 933 aa7.99□□□□□ -1.13
GTF3A-207ENST00000482655 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
GTF3A-207ENST00000482655 DNMT3LQ9UJW3 386 aa7.99□□□□□ -1.13
GTF3A-207ENST00000482655 ADD1P35611 737 aaKnown RBP7.98□□□□□ -1.13
GTF3A-207ENST00000482655 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
GTF3A-207ENST00000482655 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
GTF3A-207ENST00000482655 CEP126Q9P2H0 1117 aa7.98□□□□□ -1.13
GTF3A-207ENST00000482655 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 ATP5J2-PTCD1G3V325 749 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
GTF3A-207ENST00000482655 PTGIRP43119 386 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 ERVK-9P63128 1117 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
GTF3A-207ENST00000482655 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.14
GTF3A-207ENST00000482655 VEGFBP49765 207 aa7.96□□□□□ -1.14
GTF3A-207ENST00000482655 CYP2U1Q7Z449 544 aa7.96□□□□□ -1.14
GTF3A-207ENST00000482655 MYCP01106 439 aaPredicted RBP7.95□□□□□ -1.14
GTF3A-207ENST00000482655 SOX11P35716 441 aa7.95□□□□□ -1.14
GTF3A-207ENST00000482655 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
GTF3A-207ENST00000482655 RNF135Q8IUD6 432 aa7.95□□□□□ -1.14
GTF3A-207ENST00000482655 IRF7Q92985 503 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms