RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 ZNF594Q96JF6 807 aaPredicted RBP10.35□□□□□ -0.75
RBM39-233ENST00000482563 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
RBM39-233ENST00000482563 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
RBM39-233ENST00000482563 GTF2F1P35269 517 aaKnown RBP eCLIP10.34□□□□□ -0.75
RBM39-233ENST00000482563 MTMR3Q13615 1198 aa10.34□□□□□ -0.75
RBM39-233ENST00000482563 OGFOD1Q8N543 542 aa10.34□□□□□ -0.75
RBM39-233ENST00000482563 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
RBM39-233ENST00000482563 DNMT3AQ9Y6K1 912 aaPredicted RBP10.34□□□□□ -0.75
RBM39-233ENST00000482563 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 FAM161BQ96MY7 647 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 SEPT3Q9UH03 358 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 ATP2B1P20020 1258 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 COL9A1P20849 921 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 RNF135Q8IUD6 432 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 GTF3C2Q8WUA4 911 aaPredicted RBP10.33□□□□□ -0.76
RBM39-233ENST00000482563 VTI1AQ96AJ9 217 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 KLHL42Q9P2K6 505 aa10.33□□□□□ -0.76
RBM39-233ENST00000482563 FANCCQ00597 558 aa10.32□□□□□ -0.76
RBM39-233ENST00000482563 PHTF2Q8N3S3 785 aa10.32□□□□□ -0.76
RBM39-233ENST00000482563 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
RBM39-233ENST00000482563 ZNF526Q8TF50 670 aaPredicted RBP10.32□□□□□ -0.76
RBM39-233ENST00000482563 CAPN10Q9HC96 672 aa10.32□□□□□ -0.76
RBM39-233ENST00000482563 RNF19AQ9NV58 838 aa10.32□□□□□ -0.76
RBM39-233ENST00000482563 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 SLC10A3P09131 477 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 TNNI2P48788 182 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 TCEAL1Q15170 157 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 TGIF2Q9GZN2 237 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 ACBD3Q9H3P7 528 aa10.31□□□□□ -0.76
RBM39-233ENST00000482563 TMEM87AQ8NBN3 555 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 GABBR2O75899 941 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 CAPN12Q6ZSI9 719 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 ARMC5Q96C12 935 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 NLRP2Q9NX02 1062 aa10.3□□□□□ -0.76
RBM39-233ENST00000482563 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
RBM39-233ENST00000482563 PTPROQ16827 1216 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 TATDN2Q93075 761 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 GMLQ99445 158 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
RBM39-233ENST00000482563 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
RBM39-233ENST00000482563 PSME1Q06323 249 aa10.28□□□□□ -0.76
RBM39-233ENST00000482563 RBL2Q08999 1139 aa10.28□□□□□ -0.76
RBM39-233ENST00000482563 IER5LQ5T953 404 aa10.28□□□□□ -0.76
RBM39-233ENST00000482563 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
RBM39-233ENST00000482563 KCNB2Q92953 911 aa10.28□□□□□ -0.76
RBM39-233ENST00000482563 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.76
RBM39-233ENST00000482563 PMFBP1Q8TBY8 1022 aa10.27□□□□□ -0.76
RBM39-233ENST00000482563 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.76
RBM39-233ENST00000482563 PNMA3Q9UL41 463 aa10.27□□□□□ -0.76
RBM39-233ENST00000482563 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.76
RBM39-233ENST00000482563 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
RBM39-233ENST00000482563 CCSER2Q9H7U1 834 aa10.27□□□□□ -0.77
RBM39-233ENST00000482563 DNAAF2Q9NVR5 837 aaKnown RBP10.27□□□□□ -0.77
RBM39-233ENST00000482563 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
RBM39-233ENST00000482563 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
RBM39-233ENST00000482563 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 SMAPO00193 183 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 LGR5O75473 907 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 PARNO95453 639 aaKnown RBP10.25□□□□□ -0.77
RBM39-233ENST00000482563 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
RBM39-233ENST00000482563 PLCG2P16885 1265 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 FMR1Q06787 632 aaKnown RBP eCLIP10.25□□□□□ -0.77
RBM39-233ENST00000482563 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
RBM39-233ENST00000482563 IGBP1P78318 339 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 ZNF746Q6NUN9 644 aaPredicted RBP10.24□□□□□ -0.77
RBM39-233ENST00000482563 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 SIX5Q8N196 739 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 RNF34Q969K3 372 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 PARP2Q9UGN5 583 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
RBM39-233ENST00000482563 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
RBM39-233ENST00000482563 METTL5Q9NRN9 209 aaKnown RBP10.24□□□□□ -0.77
RBM39-233ENST00000482563 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
RBM39-233ENST00000482563 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
RBM39-233ENST00000482563 TREHO43280 583 aa10.23□□□□□ -0.77
RBM39-233ENST00000482563 SF3B2Q13435 895 aaKnown RBP10.23□□□□□ -0.77
RBM39-233ENST00000482563 MKNK1Q9BUB5 465 aa10.23□□□□□ -0.77
RBM39-233ENST00000482563 RBCK1Q9BYM8 510 aa10.23□□□□□ -0.77
RBM39-233ENST00000482563 DMGDHQ9UI17 866 aaKnown RBP10.23□□□□□ -0.77
RBM39-233ENST00000482563 TPD52L2O43399 206 aaKnown RBP10.22□□□□□ -0.77
RBM39-233ENST00000482563 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
RBM39-233ENST00000482563 EML3Q32P44 896 aa10.21□□□□□ -0.77
RBM39-233ENST00000482563 TMC4Q7Z404 712 aa10.21□□□□□ -0.77
RBM39-233ENST00000482563 DUSP9Q99956 384 aaKnown RBP10.21□□□□□ -0.77
RBM39-233ENST00000482563 FUT2Q10981 343 aa10.21□□□□□ -0.78
RBM39-233ENST00000482563 SFI1A8K8P3 1242 aa10.2□□□□□ -0.78
RBM39-233ENST00000482563 ATMINO43313 823 aaPredicted RBP10.2□□□□□ -0.78
RBM39-233ENST00000482563 SEC13P55735 322 aa10.2□□□□□ -0.78
RBM39-233ENST00000482563 LYPD8Q6UX82 237 aa10.2□□□□□ -0.78
RBM39-233ENST00000482563 ZNF76P36508 570 aa10.19□□□□□ -0.78
RBM39-233ENST00000482563 XPCQ01831 940 aaPredicted RBP10.19□□□□□ -0.78
RBM39-233ENST00000482563 DSC3Q14574 896 aa10.19□□□□□ -0.78
RBM39-233ENST00000482563 OCSTAMPQ9BR26 566 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms