RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 GCP02774 474 aa20.9■□□□□ 0.94
HLA-F-225ENST00000482257 UPF1Q92900 1129 aaKnown RBP eCLIP20.9■□□□□ 0.94
HLA-F-225ENST00000482257 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
HLA-F-225ENST00000482257 COL14A1Q05707 1796 aaKnown RBP20.9■□□□□ 0.94
HLA-F-225ENST00000482257 EP400Q96L91 3159 aa20.89■□□□□ 0.94
HLA-F-225ENST00000482257 SOX12O15370 315 aa20.88■□□□□ 0.93
HLA-F-225ENST00000482257 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
HLA-F-225ENST00000482257 VPS72Q15906 364 aa20.87■□□□□ 0.93
HLA-F-225ENST00000482257 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
HLA-F-225ENST00000482257 NFAT5O94916 1531 aa20.86■□□□□ 0.93
HLA-F-225ENST00000482257 KIF24Q5T7B8 1368 aa20.85■□□□□ 0.93
HLA-F-225ENST00000482257 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
HLA-F-225ENST00000482257 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
HLA-F-225ENST00000482257 LTN1O94822 1766 aa20.83■□□□□ 0.93
HLA-F-225ENST00000482257 MTHFSP49914 203 aa20.83■□□□□ 0.93
HLA-F-225ENST00000482257 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.93
HLA-F-225ENST00000482257 CHRNA2Q15822 529 aa20.83■□□□□ 0.93
HLA-F-225ENST00000482257 MIER1Q8N108 512 aa20.83■□□□□ 0.93
HLA-F-225ENST00000482257 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
HLA-F-225ENST00000482257 CPDO75976 1380 aa20.83■□□□□ 0.92
HLA-F-225ENST00000482257 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
HLA-F-225ENST00000482257 CCER2I3L3R5 266 aa20.82■□□□□ 0.92
HLA-F-225ENST00000482257 AMPHP49418 695 aa20.82■□□□□ 0.92
HLA-F-225ENST00000482257 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
HLA-F-225ENST00000482257 ARHGEF25Q86VW2 580 aa20.82■□□□□ 0.92
HLA-F-225ENST00000482257 PRDM11Q9NQV5 511 aa20.82■□□□□ 0.92
HLA-F-225ENST00000482257 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
HLA-F-225ENST00000482257 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
HLA-F-225ENST00000482257 BRWD3Q6RI45 1802 aa20.81■□□□□ 0.92
HLA-F-225ENST00000482257 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-225ENST00000482257 LMO7Q8WWI1 1683 aa20.8■□□□□ 0.92
HLA-F-225ENST00000482257 FBLN1P23142 703 aa20.8■□□□□ 0.92
HLA-F-225ENST00000482257 EMILIN1Q9Y6C2 1016 aa20.8■□□□□ 0.92
HLA-F-225ENST00000482257 FLT4P35916 1363 aa20.8■□□□□ 0.92
HLA-F-225ENST00000482257 ABCC6O95255 1503 aa20.79■□□□□ 0.92
HLA-F-225ENST00000482257 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
HLA-F-225ENST00000482257 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
HLA-F-225ENST00000482257 CCDC9Q9Y3X0 531 aaKnown RBP20.78■□□□□ 0.92
HLA-F-225ENST00000482257 ONECUT3O60422 494 aaPredicted RBP20.77■□□□□ 0.92
HLA-F-225ENST00000482257 IP6K1Q92551 441 aa20.77■□□□□ 0.92
HLA-F-225ENST00000482257 INSRP06213 1382 aa20.76■□□□□ 0.91
HLA-F-225ENST00000482257 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
HLA-F-225ENST00000482257 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
HLA-F-225ENST00000482257 SPATA31A5Q5VU36 1347 aa20.76■□□□□ 0.91
HLA-F-225ENST00000482257 SPATA31A7Q8IWB4 1347 aa20.76■□□□□ 0.91
HLA-F-225ENST00000482257 HOXC9P31274 260 aa20.75■□□□□ 0.91
HLA-F-225ENST00000482257 BLMP54132 1417 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-225ENST00000482257 PEAK1Q9H792 1746 aa20.75■□□□□ 0.91
HLA-F-225ENST00000482257 FAM98CQ17RN3 349 aaKnown RBP20.74■□□□□ 0.91
HLA-F-225ENST00000482257 THSD7AQ9UPZ6 1657 aa20.73■□□□□ 0.91
HLA-F-225ENST00000482257 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
HLA-F-225ENST00000482257 COL18A1P39060 1754 aa20.72■□□□□ 0.91
HLA-F-225ENST00000482257 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
HLA-F-225ENST00000482257 HSP90AB2PQ58FF8 381 aa20.72■□□□□ 0.91
HLA-F-225ENST00000482257 STRN4Q9NRL3 753 aa20.72■□□□□ 0.91
HLA-F-225ENST00000482257 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
HLA-F-225ENST00000482257 COL5A2P05997 1499 aaPredicted RBP20.7■□□□□ 0.9
HLA-F-225ENST00000482257 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
HLA-F-225ENST00000482257 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
HLA-F-225ENST00000482257 LARP1Q6PKG0 1096 aaKnown RBP20.68■□□□□ 0.9
HLA-F-225ENST00000482257 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
HLA-F-225ENST00000482257 AXIN2Q9Y2T1 843 aa20.67■□□□□ 0.9
HLA-F-225ENST00000482257 IL13P35225 146 aa20.66■□□□□ 0.9
HLA-F-225ENST00000482257 EVA1CP58658 441 aa20.66■□□□□ 0.9
HLA-F-225ENST00000482257 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
HLA-F-225ENST00000482257 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
HLA-F-225ENST00000482257 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
HLA-F-225ENST00000482257 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
HLA-F-225ENST00000482257 FAM208AQ9UK61 1670 aaKnown RBP20.66■□□□□ 0.9
HLA-F-225ENST00000482257 ERBB3P21860 1342 aa20.65■□□□□ 0.9
HLA-F-225ENST00000482257 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
HLA-F-225ENST00000482257 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
HLA-F-225ENST00000482257 A0A0G2JS52 829 aa20.64■□□□□ 0.89
HLA-F-225ENST00000482257 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
HLA-F-225ENST00000482257 MYT1Q01538 1121 aa20.64■□□□□ 0.89
HLA-F-225ENST00000482257 PNISRQ8TF01 805 aaKnown RBP20.63■□□□□ 0.89
HLA-F-225ENST00000482257 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
HLA-F-225ENST00000482257 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
HLA-F-225ENST00000482257 FAM182BQ5T319 152 aa20.62■□□□□ 0.89
HLA-F-225ENST00000482257 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
HLA-F-225ENST00000482257 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
HLA-F-225ENST00000482257 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
HLA-F-225ENST00000482257 BARGINQ6ZT62 677 aa20.6■□□□□ 0.89
HLA-F-225ENST00000482257 CRB1P82279 1406 aa20.6■□□□□ 0.89
HLA-F-225ENST00000482257 TOM1L2Q6ZVM7 507 aa20.59■□□□□ 0.89
HLA-F-225ENST00000482257 EYA1Q99502 592 aa20.59■□□□□ 0.89
HLA-F-225ENST00000482257 NLRP2Q9NX02 1062 aa20.59■□□□□ 0.89
HLA-F-225ENST00000482257 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
HLA-F-225ENST00000482257 IGSF1Q8N6C5 1336 aa20.58■□□□□ 0.89
HLA-F-225ENST00000482257 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
HLA-F-225ENST00000482257 TCP11L2Q8N4U5 519 aa20.58■□□□□ 0.89
HLA-F-225ENST00000482257 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
HLA-F-225ENST00000482257 FCHSD2O94868 740 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 NEFMP07197 916 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 CCDC125Q86Z20 511 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
HLA-F-225ENST00000482257 PARP4Q9UKK3 1724 aaKnown RBP20.56■□□□□ 0.88
HLA-F-225ENST00000482257 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms