RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ABCC6O95255 1503 aa16.6■□□□□ 0.25
HMGN1-213ENST00000482192 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
HMGN1-213ENST00000482192 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
HMGN1-213ENST00000482192 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
HMGN1-213ENST00000482192 COL18A1P39060 1754 aa16.59■□□□□ 0.25
HMGN1-213ENST00000482192 THRAP3Q9Y2W1 955 aaKnown RBP16.58■□□□□ 0.24
HMGN1-213ENST00000482192 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
HMGN1-213ENST00000482192 WDR17Q8IZU2 1322 aa16.56■□□□□ 0.24
HMGN1-213ENST00000482192 EIF4G2P78344 907 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■□□□□ 9.4
HMGN1-213ENST00000482192 TOM1L2Q6ZVM7 507 aa16.56■□□□□ 0.24
HMGN1-213ENST00000482192 SF3B2Q13435 895 aaKnown RBP16.54■□□□□ 0.24
HMGN1-213ENST00000482192 COG3Q96JB2 828 aa16.54■□□□□ 0.24
HMGN1-213ENST00000482192 MYOM1P52179 1685 aa16.53■□□□□ 0.24
HMGN1-213ENST00000482192 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
HMGN1-213ENST00000482192 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
HMGN1-213ENST00000482192 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
HMGN1-213ENST00000482192 LTN1O94822 1766 aa16.51■□□□□ 0.23
HMGN1-213ENST00000482192 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
HMGN1-213ENST00000482192 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
HMGN1-213ENST00000482192 FYB1O15117 783 aa16.5■□□□□ 0.23
HMGN1-213ENST00000482192 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
HMGN1-213ENST00000482192 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-213ENST00000482192 CARD10Q9BWT7 1032 aa16.5■□□□□ 0.23
HMGN1-213ENST00000482192 ERBB3P21860 1342 aa16.49■□□□□ 0.23
HMGN1-213ENST00000482192 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
HMGN1-213ENST00000482192 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
HMGN1-213ENST00000482192 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
HMGN1-213ENST00000482192 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
HMGN1-213ENST00000482192 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
HMGN1-213ENST00000482192 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
HMGN1-213ENST00000482192 EP400Q96L91 3159 aa16.48■□□□□ 0.23
HMGN1-213ENST00000482192 BAG6P46379 1132 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 DDB1Q16531 1140 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
HMGN1-213ENST00000482192 MAP3K19Q56UN5 1328 aa16.46■□□□□ 0.23
HMGN1-213ENST00000482192 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
HMGN1-213ENST00000482192 IP6K1Q92551 441 aa16.46■□□□□ 0.23
HMGN1-213ENST00000482192 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
HMGN1-213ENST00000482192 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
HMGN1-213ENST00000482192 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
HMGN1-213ENST00000482192 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
HMGN1-213ENST00000482192 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
HMGN1-213ENST00000482192 AMPHP49418 695 aa16.44■□□□□ 0.22
HMGN1-213ENST00000482192 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
HMGN1-213ENST00000482192 TRIM37O94972 964 aa16.43■□□□□ 0.22
HMGN1-213ENST00000482192 HOXC9P31274 260 aa16.43■□□□□ 0.22
HMGN1-213ENST00000482192 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
HMGN1-213ENST00000482192 FBLN1P23142 703 aa16.42■□□□□ 0.22
HMGN1-213ENST00000482192 FAM208AQ9UK61 1670 aaKnown RBP16.42■□□□□ 0.22
HMGN1-213ENST00000482192 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
HMGN1-213ENST00000482192 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
HMGN1-213ENST00000482192 TNS2Q63HR2 1409 aa16.41■□□□□ 0.22
HMGN1-213ENST00000482192 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
HMGN1-213ENST00000482192 EXOC5O00471 708 aa16.4■□□□□ 0.22
HMGN1-213ENST00000482192 IL2RBP14784 551 aa16.4■□□□□ 0.22
HMGN1-213ENST00000482192 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-213ENST00000482192 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-213ENST00000482192 BCL9O00512 1426 aa16.39■□□□□ 0.21
HMGN1-213ENST00000482192 MARCH10Q8NA82 808 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-213ENST00000482192 FLT4P35916 1363 aa16.38■□□□□ 0.21
HMGN1-213ENST00000482192 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
HMGN1-213ENST00000482192 SMG6Q86US8 1419 aaKnown RBP16.38■□□□□ 0.21
HMGN1-213ENST00000482192 APBA3O96018 575 aa16.38■□□□□ 0.21
HMGN1-213ENST00000482192 PANK3Q9H999 370 aa16.37■□□□□ 0.21
HMGN1-213ENST00000482192 INSRP06213 1382 aa16.37■□□□□ 0.21
HMGN1-213ENST00000482192 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
HMGN1-213ENST00000482192 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
HMGN1-213ENST00000482192 NSD2O96028 1365 aa16.35■□□□□ 0.21
HMGN1-213ENST00000482192 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
HMGN1-213ENST00000482192 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
HMGN1-213ENST00000482192 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-213ENST00000482192 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.21
HMGN1-213ENST00000482192 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
HMGN1-213ENST00000482192 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-213ENST00000482192 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
HMGN1-213ENST00000482192 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
HMGN1-213ENST00000482192 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
HMGN1-213ENST00000482192 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
HMGN1-213ENST00000482192 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
HMGN1-213ENST00000482192 RREB1Q92766 1687 aa16.3■□□□□ 0.2
HMGN1-213ENST00000482192 MEGF6O75095 1541 aa16.29■□□□□ 0.2
HMGN1-213ENST00000482192 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-213ENST00000482192 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
HMGN1-213ENST00000482192 PLSCR1O15162 318 aa16.29■□□□□ 0.2
HMGN1-213ENST00000482192 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-213ENST00000482192 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
HMGN1-213ENST00000482192 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
HMGN1-213ENST00000482192 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
HMGN1-213ENST00000482192 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
HMGN1-213ENST00000482192 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
HMGN1-213ENST00000482192 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
HMGN1-213ENST00000482192 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
HMGN1-213ENST00000482192 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-213ENST00000482192 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
HMGN1-213ENST00000482192 NUP188Q5SRE5 1749 aa16.27■□□□□ 0.19
HMGN1-213ENST00000482192 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms