RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 NFAT5O94916 1531 aa16.05■□□□□ 0.16
CCM2-213ENST00000480658 CD163L1Q9NR16 1453 aa16.05■□□□□ 0.16
CCM2-213ENST00000480658 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
CCM2-213ENST00000480658 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
CCM2-213ENST00000480658 A0A1W2PP64 1363 aa16.04■□□□□ 0.16
CCM2-213ENST00000480658 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
CCM2-213ENST00000480658 TOM1L2Q6ZVM7 507 aa16.04■□□□□ 0.16
CCM2-213ENST00000480658 CCDC7Q96M83 1385 aa16.03■□□□□ 0.16
CCM2-213ENST00000480658 TESK2Q96S53 571 aa16.03■□□□□ 0.16
CCM2-213ENST00000480658 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
CCM2-213ENST00000480658 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.16
CCM2-213ENST00000480658 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.16
CCM2-213ENST00000480658 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
CCM2-213ENST00000480658 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
CCM2-213ENST00000480658 COL18A1P39060 1754 aa16.02■□□□□ 0.15
CCM2-213ENST00000480658 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
CCM2-213ENST00000480658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCM2-213ENST00000480658 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
CCM2-213ENST00000480658 CARD10Q9BWT7 1032 aa16■□□□□ 0.15
CCM2-213ENST00000480658 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
CCM2-213ENST00000480658 WNK3Q9BYP7 1800 aa15.99■□□□□ 0.15
CCM2-213ENST00000480658 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
CCM2-213ENST00000480658 DDB1Q16531 1140 aa15.99■□□□□ 0.15
CCM2-213ENST00000480658 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
CCM2-213ENST00000480658 BCL9O00512 1426 aa15.98■□□□□ 0.15
CCM2-213ENST00000480658 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
CCM2-213ENST00000480658 COG3Q96JB2 828 aa15.98■□□□□ 0.15
CCM2-213ENST00000480658 SOX12O15370 315 aa15.97■□□□□ 0.15
CCM2-213ENST00000480658 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
CCM2-213ENST00000480658 LTN1O94822 1766 aa15.97■□□□□ 0.15
CCM2-213ENST00000480658 ERBB3P21860 1342 aa15.96■□□□□ 0.15
CCM2-213ENST00000480658 RGPD3A6NKT7 1758 aaPredicted RBP15.96■□□□□ 0.15
CCM2-213ENST00000480658 RGPD4Q7Z3J3 1758 aa15.96■□□□□ 0.15
CCM2-213ENST00000480658 NME9Q86XW9 330 aa15.96■□□□□ 0.15
CCM2-213ENST00000480658 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
CCM2-213ENST00000480658 RTL1A6NKG5 1358 aa15.95■□□□□ 0.14
CCM2-213ENST00000480658 TRIM37O94972 964 aa15.94■□□□□ 0.14
CCM2-213ENST00000480658 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
CCM2-213ENST00000480658 APBA3O96018 575 aa15.93■□□□□ 0.14
CCM2-213ENST00000480658 LRP5O75197 1615 aa15.93■□□□□ 0.14
CCM2-213ENST00000480658 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
CCM2-213ENST00000480658 PEAK1Q9H792 1746 aa15.92■□□□□ 0.14
CCM2-213ENST00000480658 EN1Q05925 392 aaPredicted RBP15.92■□□□□ 0.14
CCM2-213ENST00000480658 FAM182BQ5T319 152 aa15.92■□□□□ 0.14
CCM2-213ENST00000480658 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
CCM2-213ENST00000480658 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
CCM2-213ENST00000480658 EXOC5O00471 708 aa15.91■□□□□ 0.14
CCM2-213ENST00000480658 NBPF14Q5TI25 921 aa15.91■□□□□ 0.14
CCM2-213ENST00000480658 RREB1Q92766 1687 aa15.9■□□□□ 0.14
CCM2-213ENST00000480658 IP6K1Q92551 441 aa15.9■□□□□ 0.14
CCM2-213ENST00000480658 RGPD5Q99666 1765 aa15.9■□□□□ 0.14
CCM2-213ENST00000480658 IL2RBP14784 551 aa15.89■□□□□ 0.13
CCM2-213ENST00000480658 ANKRD24Q8TF21 1146 aa15.89■□□□□ 0.13
CCM2-213ENST00000480658 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.13
CCM2-213ENST00000480658 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
CCM2-213ENST00000480658 NLRP2Q9NX02 1062 aa15.89■□□□□ 0.13
CCM2-213ENST00000480658 PLSCR1O15162 318 aa15.88■□□□□ 0.13
CCM2-213ENST00000480658 AMPHP49418 695 aa15.88■□□□□ 0.13
CCM2-213ENST00000480658 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
CCM2-213ENST00000480658 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCM2-213ENST00000480658 MYOM1P52179 1685 aa15.86■□□□□ 0.13
CCM2-213ENST00000480658 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
CCM2-213ENST00000480658 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
CCM2-213ENST00000480658 FYB1O15117 783 aa15.84■□□□□ 0.13
CCM2-213ENST00000480658 NUP188Q5SRE5 1749 aa15.84■□□□□ 0.13
CCM2-213ENST00000480658 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
CCM2-213ENST00000480658 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
CCM2-213ENST00000480658 FLT4P35916 1363 aa15.84■□□□□ 0.13
CCM2-213ENST00000480658 NHSQ6T4R5 1651 aa15.83■□□□□ 0.13
CCM2-213ENST00000480658 HOXC9P31274 260 aa15.83■□□□□ 0.12
CCM2-213ENST00000480658 MARCH10Q8NA82 808 aaPredicted RBP15.83■□□□□ 0.12
CCM2-213ENST00000480658 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
CCM2-213ENST00000480658 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
CCM2-213ENST00000480658 INSRP06213 1382 aa15.81■□□□□ 0.12
CCM2-213ENST00000480658 R3HDM1Q15032 1099 aaKnown RBP15.81■□□□□ 0.12
CCM2-213ENST00000480658 NSD2O96028 1365 aa15.8■□□□□ 0.12
CCM2-213ENST00000480658 PSDA5PKW4 1024 aaPredicted RBP15.8■□□□□ 0.12
CCM2-213ENST00000480658 GGNBP2Q9H3C7 697 aa15.8■□□□□ 0.12
CCM2-213ENST00000480658 PLEKHG2Q9H7P9 1386 aa15.78■□□□□ 0.12
CCM2-213ENST00000480658 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.12
CCM2-213ENST00000480658 ANKRD26Q9UPS8 1709 aa15.77■□□□□ 0.12
CCM2-213ENST00000480658 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
CCM2-213ENST00000480658 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
CCM2-213ENST00000480658 RRS1Q15050 365 aaKnown RBP15.75■□□□□ 0.11
CCM2-213ENST00000480658 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
CCM2-213ENST00000480658 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
CCM2-213ENST00000480658 PCDH11XQ9BZA7 1347 aa15.73■□□□□ 0.11
CCM2-213ENST00000480658 PCDH11YQ9BZA8 1340 aa15.73■□□□□ 0.11
CCM2-213ENST00000480658 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
CCM2-213ENST00000480658 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
CCM2-213ENST00000480658 SPON1Q9HCB6 807 aa15.73■□□□□ 0.11
CCM2-213ENST00000480658 STK32BQ9NY57 414 aa15.73■□□□□ 0.11
CCM2-213ENST00000480658 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
CCM2-213ENST00000480658 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
CCM2-213ENST00000480658 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
CCM2-213ENST00000480658 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
CCM2-213ENST00000480658 MEGF6O75095 1541 aa15.72■□□□□ 0.11
CCM2-213ENST00000480658 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
CCM2-213ENST00000480658 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
CCM2-213ENST00000480658 BTAF1O14981 1849 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms