RNA–Protein interactions for RNA: ENST00000480650.3

PDZD4-206, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-206ENST00000480650 COL14A1Q05707 1796 aaKnown RBP16.18■□□□□ 0.18
PDZD4-206ENST00000480650 AATKQ6ZMQ8 1374 aa16.18■□□□□ 0.18
PDZD4-206ENST00000480650 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
PDZD4-206ENST00000480650 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
PDZD4-206ENST00000480650 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
PDZD4-206ENST00000480650 HOXC9P31274 260 aa16.17■□□□□ 0.18
PDZD4-206ENST00000480650 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
PDZD4-206ENST00000480650 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
PDZD4-206ENST00000480650 MTHFSP49914 203 aa16.16■□□□□ 0.18
PDZD4-206ENST00000480650 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
PDZD4-206ENST00000480650 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
PDZD4-206ENST00000480650 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
PDZD4-206ENST00000480650 FLT4P35916 1363 aa16.14■□□□□ 0.17
PDZD4-206ENST00000480650 HSP90AB2PQ58FF8 381 aa16.14■□□□□ 0.17
PDZD4-206ENST00000480650 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
PDZD4-206ENST00000480650 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
PDZD4-206ENST00000480650 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
PDZD4-206ENST00000480650 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
PDZD4-206ENST00000480650 QTRT2Q9H974 415 aaKnown RBP16.14■□□□□ 0.17
PDZD4-206ENST00000480650 PLCH1Q4KWH8 1693 aa16.14■□□□□ 0.17
PDZD4-206ENST00000480650 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
PDZD4-206ENST00000480650 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
PDZD4-206ENST00000480650 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
PDZD4-206ENST00000480650 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
PDZD4-206ENST00000480650 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
PDZD4-206ENST00000480650 CAMTA1Q9Y6Y1 1673 aa16.12■□□□□ 0.17
PDZD4-206ENST00000480650 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
PDZD4-206ENST00000480650 TRPC5Q9UL62 973 aaPredicted RBP16.12■□□□□ 0.17
PDZD4-206ENST00000480650 SLIT2O94813 1529 aa16.12■□□□□ 0.17
PDZD4-206ENST00000480650 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
PDZD4-206ENST00000480650 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
PDZD4-206ENST00000480650 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
PDZD4-206ENST00000480650 NWD2Q9ULI1 1742 aa16.11■□□□□ 0.17
PDZD4-206ENST00000480650 COL18A1P39060 1754 aa16.11■□□□□ 0.17
PDZD4-206ENST00000480650 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
PDZD4-206ENST00000480650 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
PDZD4-206ENST00000480650 INSRP06213 1382 aa16.11■□□□□ 0.17
PDZD4-206ENST00000480650 LMO7Q8WWI1 1683 aa16.1■□□□□ 0.17
PDZD4-206ENST00000480650 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
PDZD4-206ENST00000480650 ABCC6O95255 1503 aa16.09■□□□□ 0.17
PDZD4-206ENST00000480650 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
PDZD4-206ENST00000480650 VPS72Q15906 364 aa16.09■□□□□ 0.17
PDZD4-206ENST00000480650 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
PDZD4-206ENST00000480650 COL5A2P05997 1499 aaPredicted RBP16.09■□□□□ 0.17
PDZD4-206ENST00000480650 DIAPH1O60610 1272 aaKnown RBP16.08■□□□□ 0.16
PDZD4-206ENST00000480650 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.16
PDZD4-206ENST00000480650 ERBB3P21860 1342 aa16.08■□□□□ 0.16
PDZD4-206ENST00000480650 A0A0G2JS52 829 aa16.07■□□□□ 0.16
PDZD4-206ENST00000480650 MYT1Q01538 1121 aa16.07■□□□□ 0.16
PDZD4-206ENST00000480650 GJD4Q96KN9 370 aaPredicted RBP16.07■□□□□ 0.16
PDZD4-206ENST00000480650 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
PDZD4-206ENST00000480650 CRB1P82279 1406 aa16.06■□□□□ 0.16
PDZD4-206ENST00000480650 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
PDZD4-206ENST00000480650 RXRBP28702 533 aa16.06■□□□□ 0.16
PDZD4-206ENST00000480650 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
PDZD4-206ENST00000480650 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
PDZD4-206ENST00000480650 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
PDZD4-206ENST00000480650 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
PDZD4-206ENST00000480650 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
PDZD4-206ENST00000480650 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.05■□□□□ 0.16
PDZD4-206ENST00000480650 ATRNO75882 1429 aa16.04■□□□□ 0.16
PDZD4-206ENST00000480650 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
PDZD4-206ENST00000480650 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
PDZD4-206ENST00000480650 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
PDZD4-206ENST00000480650 USHBP1Q8N6Y0 703 aa16.04■□□□□ 0.16
PDZD4-206ENST00000480650 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
PDZD4-206ENST00000480650 SPATA31A1Q5TZJ5 1347 aa16.03■□□□□ 0.16
PDZD4-206ENST00000480650 IL13P35225 146 aa16.03■□□□□ 0.16
PDZD4-206ENST00000480650 FAM98CQ17RN3 349 aaKnown RBP16.03■□□□□ 0.16
PDZD4-206ENST00000480650 EYA1Q99502 592 aa16.03■□□□□ 0.16
PDZD4-206ENST00000480650 THRAP3Q9Y2W1 955 aaKnown RBP16.03■□□□□ 0.16
PDZD4-206ENST00000480650 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
PDZD4-206ENST00000480650 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
PDZD4-206ENST00000480650 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
PDZD4-206ENST00000480650 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
PDZD4-206ENST00000480650 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
PDZD4-206ENST00000480650 MRS2Q9HD23 443 aa16■□□□□ 0.15
PDZD4-206ENST00000480650 HMOX1P09601 288 aa15.99■□□□□ 0.15
PDZD4-206ENST00000480650 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
PDZD4-206ENST00000480650 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDZD4-206ENST00000480650 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
PDZD4-206ENST00000480650 IL2RBP14784 551 aa15.98■□□□□ 0.15
PDZD4-206ENST00000480650 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
PDZD4-206ENST00000480650 CDCA7Q9BWT1 371 aaPredicted RBP15.98■□□□□ 0.15
PDZD4-206ENST00000480650 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
PDZD4-206ENST00000480650 SEPT12Q8IYM1 358 aa15.97■□□□□ 0.15
PDZD4-206ENST00000480650 MIER1Q8N108 512 aa15.97■□□□□ 0.15
PDZD4-206ENST00000480650 EXOC5O00471 708 aa15.96■□□□□ 0.15
PDZD4-206ENST00000480650 COL3A1P02461 1466 aaPredicted RBP15.96■□□□□ 0.14
PDZD4-206ENST00000480650 GLI3P10071 1580 aa15.96■□□□□ 0.14
PDZD4-206ENST00000480650 NEFMP07197 916 aa15.95■□□□□ 0.14
PDZD4-206ENST00000480650 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
PDZD4-206ENST00000480650 CCDC184Q52MB2 194 aa15.95■□□□□ 0.14
PDZD4-206ENST00000480650 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
PDZD4-206ENST00000480650 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
PDZD4-206ENST00000480650 DDB1Q16531 1140 aa15.94■□□□□ 0.14
PDZD4-206ENST00000480650 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
PDZD4-206ENST00000480650 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
PDZD4-206ENST00000480650 FCHSD2O94868 740 aa15.92■□□□□ 0.14
PDZD4-206ENST00000480650 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms