RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
TDP2-205ENST00000480495 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
TDP2-205ENST00000480495 AXIN2Q9Y2T1 843 aa21.03■□□□□ 0.96
TDP2-205ENST00000480495 COL18A1P39060 1754 aa21.02■□□□□ 0.96
TDP2-205ENST00000480495 USP54Q70EL1 1684 aa21.02■□□□□ 0.96
TDP2-205ENST00000480495 WDR17Q8IZU2 1322 aa21.02■□□□□ 0.95
TDP2-205ENST00000480495 ABCC6O95255 1503 aa21.01■□□□□ 0.95
TDP2-205ENST00000480495 TOM1L2Q6ZVM7 507 aa21.01■□□□□ 0.95
TDP2-205ENST00000480495 ANKRD36BQ8N2N9 1353 aa21■□□□□ 0.95
TDP2-205ENST00000480495 PDE3BQ13370 1112 aa21■□□□□ 0.95
TDP2-205ENST00000480495 FAM182BQ5T319 152 aa21■□□□□ 0.95
TDP2-205ENST00000480495 FAM196AQ6ZSG2 479 aa20.99■□□□□ 0.95
TDP2-205ENST00000480495 OVOS2A0A0J9YW53 1432 aa20.98■□□□□ 0.95
TDP2-205ENST00000480495 OVOS2Q6IE36 1432 aa20.98■□□□□ 0.95
TDP2-205ENST00000480495 BAG6P46379 1132 aa20.98■□□□□ 0.95
TDP2-205ENST00000480495 DEFB132Q7Z7B7 95 aa20.98■□□□□ 0.95
TDP2-205ENST00000480495 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
TDP2-205ENST00000480495 CARD10Q9BWT7 1032 aa20.96■□□□□ 0.95
TDP2-205ENST00000480495 COG3Q96JB2 828 aa20.95■□□□□ 0.94
TDP2-205ENST00000480495 CDCA7Q9BWT1 371 aaPredicted RBP20.95■□□□□ 0.94
TDP2-205ENST00000480495 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
TDP2-205ENST00000480495 PARP4Q9UKK3 1724 aaKnown RBP20.93■□□□□ 0.94
TDP2-205ENST00000480495 RGPD1P0DJD0 1748 aa20.92■□□□□ 0.94
TDP2-205ENST00000480495 CCDC7Q96M83 1385 aa20.92■□□□□ 0.94
TDP2-205ENST00000480495 DISP2A7MBM2 1401 aa20.91■□□□□ 0.94
TDP2-205ENST00000480495 ERBB3P21860 1342 aa20.91■□□□□ 0.94
TDP2-205ENST00000480495 DDB1Q16531 1140 aa20.91■□□□□ 0.94
TDP2-205ENST00000480495 TRIM37O94972 964 aa20.9■□□□□ 0.94
TDP2-205ENST00000480495 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.94
TDP2-205ENST00000480495 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
TDP2-205ENST00000480495 FYB1O15117 783 aa20.88■□□□□ 0.93
TDP2-205ENST00000480495 EN1Q05925 392 aaPredicted RBP20.88■□□□□ 0.93
TDP2-205ENST00000480495 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
TDP2-205ENST00000480495 IP6K1Q92551 441 aa20.88■□□□□ 0.93
TDP2-205ENST00000480495 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
TDP2-205ENST00000480495 LTN1O94822 1766 aa20.87■□□□□ 0.93
TDP2-205ENST00000480495 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
TDP2-205ENST00000480495 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
TDP2-205ENST00000480495 TNS1Q9HBL0 1735 aaKnown RBP20.86■□□□□ 0.93
TDP2-205ENST00000480495 APBA3O96018 575 aa20.85■□□□□ 0.93
TDP2-205ENST00000480495 HSPA5P11021 654 aaKnown RBP20.85■□□□□ 0.93
TDP2-205ENST00000480495 GGNBP2Q9H3C7 697 aa20.85■□□□□ 0.93
TDP2-205ENST00000480495 PARD3Q8TEW0 1356 aa20.85■□□□□ 0.93
TDP2-205ENST00000480495 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
TDP2-205ENST00000480495 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
TDP2-205ENST00000480495 EXOC5O00471 708 aa20.84■□□□□ 0.93
TDP2-205ENST00000480495 AMPHP49418 695 aa20.83■□□□□ 0.93
TDP2-205ENST00000480495 CAMKK2Q96RR4 588 aa20.83■□□□□ 0.93
TDP2-205ENST00000480495 CARD14Q9BXL6 1004 aa20.83■□□□□ 0.93
TDP2-205ENST00000480495 MYOM1P52179 1685 aa20.83■□□□□ 0.92
TDP2-205ENST00000480495 BCL9O00512 1426 aa20.82■□□□□ 0.92
TDP2-205ENST00000480495 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
TDP2-205ENST00000480495 HOXC9P31274 260 aa20.82■□□□□ 0.92
TDP2-205ENST00000480495 EZH2Q15910 746 aaKnown RBP20.82■□□□□ 0.92
TDP2-205ENST00000480495 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
TDP2-205ENST00000480495 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
TDP2-205ENST00000480495 PEAK1Q9H792 1746 aa20.81■□□□□ 0.92
TDP2-205ENST00000480495 IL2RBP14784 551 aa20.81■□□□□ 0.92
TDP2-205ENST00000480495 FBLN1P23142 703 aa20.8■□□□□ 0.92
TDP2-205ENST00000480495 TNS2Q63HR2 1409 aa20.79■□□□□ 0.92
TDP2-205ENST00000480495 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
TDP2-205ENST00000480495 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
TDP2-205ENST00000480495 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
TDP2-205ENST00000480495 KIF20BQ96Q89 1820 aa20.77■□□□□ 0.92
TDP2-205ENST00000480495 BCL11BQ9C0K0 894 aaPredicted RBP20.77■□□□□ 0.92
TDP2-205ENST00000480495 CGNL1Q0VF96 1302 aa20.77■□□□□ 0.91
TDP2-205ENST00000480495 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.91
TDP2-205ENST00000480495 KIF24Q5T7B8 1368 aa20.76■□□□□ 0.91
TDP2-205ENST00000480495 PLSCR1O15162 318 aa20.74■□□□□ 0.91
TDP2-205ENST00000480495 INSRP06213 1382 aa20.72■□□□□ 0.91
TDP2-205ENST00000480495 FLT4P35916 1363 aa20.72■□□□□ 0.91
TDP2-205ENST00000480495 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
TDP2-205ENST00000480495 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
TDP2-205ENST00000480495 SBF2Q86WG5 1849 aa20.71■□□□□ 0.91
TDP2-205ENST00000480495 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
TDP2-205ENST00000480495 NBPF14Q5TI25 921 aa20.7■□□□□ 0.9
TDP2-205ENST00000480495 RREB1Q92766 1687 aa20.7■□□□□ 0.9
TDP2-205ENST00000480495 HSP90AB2PQ58FF8 381 aa20.69■□□□□ 0.9
TDP2-205ENST00000480495 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
TDP2-205ENST00000480495 PANK3Q9H999 370 aa20.69■□□□□ 0.9
TDP2-205ENST00000480495 RGPD3A6NKT7 1758 aaPredicted RBP20.68■□□□□ 0.9
TDP2-205ENST00000480495 RGPD4Q7Z3J3 1758 aa20.68■□□□□ 0.9
TDP2-205ENST00000480495 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
TDP2-205ENST00000480495 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
TDP2-205ENST00000480495 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
TDP2-205ENST00000480495 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
TDP2-205ENST00000480495 KCNQ2O43526 872 aa20.65■□□□□ 0.9
TDP2-205ENST00000480495 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
TDP2-205ENST00000480495 SRCAPQ6ZRS2 3230 aa20.64■□□□□ 0.89
TDP2-205ENST00000480495 NSD2O96028 1365 aa20.64■□□□□ 0.89
TDP2-205ENST00000480495 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
TDP2-205ENST00000480495 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
TDP2-205ENST00000480495 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
TDP2-205ENST00000480495 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
TDP2-205ENST00000480495 MEGF6O75095 1541 aa20.63■□□□□ 0.89
TDP2-205ENST00000480495 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
TDP2-205ENST00000480495 USHBP1Q8N6Y0 703 aa20.63■□□□□ 0.89
TDP2-205ENST00000480495 NHSQ6T4R5 1651 aa20.63■□□□□ 0.89
TDP2-205ENST00000480495 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
TDP2-205ENST00000480495 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms