RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
SIK3-210ENST00000480468 PKP1Q13835 747 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
SIK3-210ENST00000480468 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 ST18O60284 1047 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.32
SIK3-210ENST00000480468 USP26Q9BXU7 913 aa13.02□□□□□ -0.33
SIK3-210ENST00000480468 PHF14O94880 888 aa13.01□□□□□ -0.33
SIK3-210ENST00000480468 CD109Q6YHK3 1445 aa13.01□□□□□ -0.33
SIK3-210ENST00000480468 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
SIK3-210ENST00000480468 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
SIK3-210ENST00000480468 FEZ1Q99689 392 aa13.01□□□□□ -0.33
SIK3-210ENST00000480468 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
SIK3-210ENST00000480468 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
SIK3-210ENST00000480468 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
SIK3-210ENST00000480468 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
SIK3-210ENST00000480468 ANKRD7Q92527 254 aa13□□□□□ -0.33
SIK3-210ENST00000480468 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
SIK3-210ENST00000480468 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
SIK3-210ENST00000480468 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
SIK3-210ENST00000480468 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
SIK3-210ENST00000480468 RNF214Q8ND24 703 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
SIK3-210ENST00000480468 TET3O43151 1660 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
SIK3-210ENST00000480468 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 NRXN1Q9ULB1 1477 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
SIK3-210ENST00000480468 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
SIK3-210ENST00000480468 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
SIK3-210ENST00000480468 ZGPATQ8N5A5 531 aaKnown RBP12.98□□□□□ -0.33
SIK3-210ENST00000480468 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
SIK3-210ENST00000480468 TSC1Q92574 1164 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 TMEM51Q9NW97 253 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 BRD1O95696 1058 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 CFAP70Q5T0N1 1121 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 TTC22Q5TAA0 569 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
SIK3-210ENST00000480468 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
SIK3-210ENST00000480468 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
SIK3-210ENST00000480468 SYCP1Q15431 976 aa12.96□□□□□ -0.33
SIK3-210ENST00000480468 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
SIK3-210ENST00000480468 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
SIK3-210ENST00000480468 TPM3P06753 285 aa12.96□□□□□ -0.34
SIK3-210ENST00000480468 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.34
SIK3-210ENST00000480468 OGFRQ9NZT2 677 aa12.96□□□□□ -0.34
SIK3-210ENST00000480468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
SIK3-210ENST00000480468 MCM2P49736 904 aa12.95□□□□□ -0.34
SIK3-210ENST00000480468 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
SIK3-210ENST00000480468 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
SIK3-210ENST00000480468 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
SIK3-210ENST00000480468 CASC1Q6TDU7 716 aa12.94□□□□□ -0.34
SIK3-210ENST00000480468 ABCC4O15439 1325 aa12.94□□□□□ -0.34
SIK3-210ENST00000480468 REC8O95072 547 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
SIK3-210ENST00000480468 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 CUL4AQ13619 759 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 KIAA1524Q8TCG1 905 aa12.93□□□□□ -0.34
SIK3-210ENST00000480468 INTS4Q96HW7 963 aaKnown RBP12.93□□□□□ -0.34
SIK3-210ENST00000480468 ADCY5O95622 1261 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 IPO4Q8TEX9 1081 aaKnown RBP12.92□□□□□ -0.34
SIK3-210ENST00000480468 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
SIK3-210ENST00000480468 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
SIK3-210ENST00000480468 NAP1L2Q9ULW6 460 aaPredicted RBP12.92□□□□□ -0.34
SIK3-210ENST00000480468 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
SIK3-210ENST00000480468 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
SIK3-210ENST00000480468 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
SIK3-210ENST00000480468 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
SIK3-210ENST00000480468 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
SIK3-210ENST00000480468 KIF1BO60333 1816 aa12.9□□□□□ -0.34
SIK3-210ENST00000480468 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
SIK3-210ENST00000480468 C1orf115Q9H7X2 142 aa12.9□□□□□ -0.34
SIK3-210ENST00000480468 KDM4AO75164 1064 aa12.89□□□□□ -0.35
SIK3-210ENST00000480468 SLC20A2Q08357 652 aa12.89□□□□□ -0.35
SIK3-210ENST00000480468 ZNF771Q7L3S4 317 aaPredicted RBP12.89□□□□□ -0.35
SIK3-210ENST00000480468 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
SIK3-210ENST00000480468 ABCC1P33527 1531 aa12.89□□□□□ -0.35
SIK3-210ENST00000480468 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
SIK3-210ENST00000480468 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
SIK3-210ENST00000480468 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
SIK3-210ENST00000480468 ERC2O15083 957 aa12.88□□□□□ -0.35
SIK3-210ENST00000480468 FAM193AP78312 1265 aa12.88□□□□□ -0.35
SIK3-210ENST00000480468 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
SIK3-210ENST00000480468 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
SIK3-210ENST00000480468 SDSP20132 328 aa12.88□□□□□ -0.35
SIK3-210ENST00000480468 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms