RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
SCAMP3-207ENST00000480219 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
SCAMP3-207ENST00000480219 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
SCAMP3-207ENST00000480219 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
SCAMP3-207ENST00000480219 HSPA1LP34931 641 aa22.5■■□□□ 1.19
SCAMP3-207ENST00000480219 WDR43Q15061 677 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCAMP3-207ENST00000480219 ADAMTS8Q9UP79 889 aa22.5■■□□□ 1.19
SCAMP3-207ENST00000480219 NCAPD2Q15021 1401 aa22.49■■□□□ 1.19
SCAMP3-207ENST00000480219 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
SCAMP3-207ENST00000480219 COL14A1Q05707 1796 aaKnown RBP22.49■■□□□ 1.19
SCAMP3-207ENST00000480219 SPATA31A6Q5VVP1 1343 aa22.49■■□□□ 1.19
SCAMP3-207ENST00000480219 FAM9BQ8IZU0 186 aa22.48■■□□□ 1.19
SCAMP3-207ENST00000480219 AXIN2Q9Y2T1 843 aa22.48■■□□□ 1.19
SCAMP3-207ENST00000480219 FAM208AQ9UK61 1670 aaKnown RBP22.47■■□□□ 1.19
SCAMP3-207ENST00000480219 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
SCAMP3-207ENST00000480219 KDRP35968 1356 aa22.47■■□□□ 1.19
SCAMP3-207ENST00000480219 PRDM11Q9NQV5 511 aa22.46■■□□□ 1.19
SCAMP3-207ENST00000480219 RGPD5Q99666 1765 aa22.45■■□□□ 1.19
SCAMP3-207ENST00000480219 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
SCAMP3-207ENST00000480219 ERBB3P21860 1342 aa22.45■■□□□ 1.18
SCAMP3-207ENST00000480219 PLEKHG5O94827 1062 aa22.44■■□□□ 1.18
SCAMP3-207ENST00000480219 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
SCAMP3-207ENST00000480219 FCHSD2O94868 740 aa22.43■■□□□ 1.18
SCAMP3-207ENST00000480219 FAM83GA6ND36 823 aa22.42■■□□□ 1.18
SCAMP3-207ENST00000480219 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
SCAMP3-207ENST00000480219 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
SCAMP3-207ENST00000480219 CHRNA2Q15822 529 aa22.42■■□□□ 1.18
SCAMP3-207ENST00000480219 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
SCAMP3-207ENST00000480219 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
SCAMP3-207ENST00000480219 FBXO41Q8TF61 875 aa22.41■■□□□ 1.18
SCAMP3-207ENST00000480219 EYA1Q99502 592 aa22.41■■□□□ 1.18
SCAMP3-207ENST00000480219 RSPH6AQ9H0K4 717 aa22.41■■□□□ 1.18
SCAMP3-207ENST00000480219 PLEKHF1Q96S99 279 aa22.4■■□□□ 1.18
SCAMP3-207ENST00000480219 NWD2Q9ULI1 1742 aa22.4■■□□□ 1.18
SCAMP3-207ENST00000480219 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.18
SCAMP3-207ENST00000480219 LRP6O75581 1613 aa22.39■■□□□ 1.18
SCAMP3-207ENST00000480219 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.17
SCAMP3-207ENST00000480219 PNNQ9H307 717 aaKnown RBP22.39■■□□□ 1.17
SCAMP3-207ENST00000480219 SLIT2O94813 1529 aa22.39■■□□□ 1.17
SCAMP3-207ENST00000480219 PLCH1Q4KWH8 1693 aa22.39■■□□□ 1.17
SCAMP3-207ENST00000480219 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
SCAMP3-207ENST00000480219 RUNDC1Q96C34 613 aa22.38■■□□□ 1.17
SCAMP3-207ENST00000480219 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
SCAMP3-207ENST00000480219 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
SCAMP3-207ENST00000480219 RGPD2P0DJD1 1756 aa22.36■■□□□ 1.17
SCAMP3-207ENST00000480219 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
SCAMP3-207ENST00000480219 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
SCAMP3-207ENST00000480219 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
SCAMP3-207ENST00000480219 NGEFQ8N5V2 710 aa22.35■■□□□ 1.17
SCAMP3-207ENST00000480219 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
SCAMP3-207ENST00000480219 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
SCAMP3-207ENST00000480219 NUTM2BA6NNL0 878 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 NUTM2EB1AL46 878 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 ADAMTS2O95450 1211 aa22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 HMOX1P09601 288 aa22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 NUTM2AQ8IVF1 878 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 BTG4Q9NY30 223 aa22.32■■□□□ 1.16
SCAMP3-207ENST00000480219 FNBP4Q8N3X1 1017 aaPredicted RBP22.31■■□□□ 1.16
SCAMP3-207ENST00000480219 CARD10Q9BWT7 1032 aa22.31■■□□□ 1.16
SCAMP3-207ENST00000480219 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
SCAMP3-207ENST00000480219 CRB1P82279 1406 aa22.31■■□□□ 1.16
SCAMP3-207ENST00000480219 CCDC146Q8IYE0 955 aa22.3■■□□□ 1.16
SCAMP3-207ENST00000480219 ZBED9Q6R2W3 1325 aa22.3■■□□□ 1.16
SCAMP3-207ENST00000480219 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
SCAMP3-207ENST00000480219 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
SCAMP3-207ENST00000480219 APAF1O14727 1248 aa22.28■■□□□ 1.16
SCAMP3-207ENST00000480219 TCP11L2Q8N4U5 519 aa22.28■■□□□ 1.16
SCAMP3-207ENST00000480219 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
SCAMP3-207ENST00000480219 PHACTR3Q96KR7 559 aa22.27■■□□□ 1.16
SCAMP3-207ENST00000480219 MAPK8IP3Q9UPT6 1336 aa22.27■■□□□ 1.16
SCAMP3-207ENST00000480219 CSB-PGBD3P0DP91 1061 aa22.26■■□□□ 1.15
SCAMP3-207ENST00000480219 CCDC27Q2M243 656 aa22.26■■□□□ 1.15
SCAMP3-207ENST00000480219 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
SCAMP3-207ENST00000480219 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
SCAMP3-207ENST00000480219 NLRP2Q9NX02 1062 aa22.26■■□□□ 1.15
SCAMP3-207ENST00000480219 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
SCAMP3-207ENST00000480219 EVA1CP58658 441 aa22.25■■□□□ 1.15
SCAMP3-207ENST00000480219 ZNF521Q96K83 1311 aa22.25■■□□□ 1.15
SCAMP3-207ENST00000480219 NEFMP07197 916 aa22.24■■□□□ 1.15
SCAMP3-207ENST00000480219 NFE2L2Q16236 605 aa22.24■■□□□ 1.15
SCAMP3-207ENST00000480219 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
SCAMP3-207ENST00000480219 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
SCAMP3-207ENST00000480219 MEGF6O75095 1541 aa22.23■■□□□ 1.15
SCAMP3-207ENST00000480219 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
SCAMP3-207ENST00000480219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
SCAMP3-207ENST00000480219 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
SCAMP3-207ENST00000480219 DISP2A7MBM2 1401 aa22.23■■□□□ 1.15
SCAMP3-207ENST00000480219 C8orf37Q96NL8 207 aa22.22■■□□□ 1.15
SCAMP3-207ENST00000480219 STRN4Q9NRL3 753 aa22.22■■□□□ 1.15
SCAMP3-207ENST00000480219 PARP4Q9UKK3 1724 aaKnown RBP22.22■■□□□ 1.15
SCAMP3-207ENST00000480219 OVOS2A0A0G2JMS6 1433 aa22.22■■□□□ 1.15
SCAMP3-207ENST00000480219 NGLY1Q96IV0 654 aa22.21■■□□□ 1.15
SCAMP3-207ENST00000480219 WNK3Q9BYP7 1800 aa22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 VPS72Q15906 364 aa22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 THRAP3Q9Y2W1 955 aaKnown RBP22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 SPATA31A5Q5VU36 1347 aa22.2■■□□□ 1.14
SCAMP3-207ENST00000480219 SPATA31A7Q8IWB4 1347 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms