RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
HERC4-210ENST00000480158 MED1Q15648 1581 aaPredicted RBP8.63□□□□□ -1.03
HERC4-210ENST00000480158 USP19O94966 1318 aa8.62□□□□□ -1.03
HERC4-210ENST00000480158 PNPLA6Q8IY17 1366 aa8.62□□□□□ -1.03
HERC4-210ENST00000480158 COL16A1Q07092 1604 aaPredicted RBP8.62□□□□□ -1.03
HERC4-210ENST00000480158 CCER2I3L3R5 266 aa8.62□□□□□ -1.03
HERC4-210ENST00000480158 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
HERC4-210ENST00000480158 YTHDC1Q96MU7 727 aaKnown RBP8.62□□□□□ -1.03
HERC4-210ENST00000480158 PRDM11Q9NQV5 511 aa8.62□□□□□ -1.03
HERC4-210ENST00000480158 KIAA0232Q92628 1395 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 U2SURPO15042 1029 aaKnown RBP8.61□□□□□ -1.03
HERC4-210ENST00000480158 ARHGEF25Q86VW2 580 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 U3KPZ7 1027 aaPredicted RBP8.61□□□□□ -1.03
HERC4-210ENST00000480158 ANKRD26Q9UPS8 1709 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
HERC4-210ENST00000480158 HOXC9P31274 260 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
HERC4-210ENST00000480158 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
HERC4-210ENST00000480158 ZNF219Q9P2Y4 722 aaPredicted RBP8.6□□□□□ -1.03
HERC4-210ENST00000480158 TAOK2Q9UL54 1235 aa8.6□□□□□ -1.03
HERC4-210ENST00000480158 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
HERC4-210ENST00000480158 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
HERC4-210ENST00000480158 VASPP50552 380 aaPredicted RBP8.6□□□□□ -1.03
HERC4-210ENST00000480158 NFAT5O94916 1531 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 MAP2P11137 1827 aaKnown RBP8.59□□□□□ -1.03
HERC4-210ENST00000480158 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
HERC4-210ENST00000480158 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
HERC4-210ENST00000480158 JCADQ9P266 1359 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 SLIT3O75094 1523 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 U2AF1L5P0DN76 240 aaPredicted RBP8.59□□□□□ -1.03
HERC4-210ENST00000480158 U2AF1Q01081 240 aaKnown RBP eCLIP8.59□□□□□ -1.03
HERC4-210ENST00000480158 EIF4A2Q14240 407 aaKnown RBP8.59□□□□□ -1.03
HERC4-210ENST00000480158 FBXO41Q8TF61 875 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 IP6K1Q92551 441 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 STRN4Q9NRL3 753 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
HERC4-210ENST00000480158 FLT4P35916 1363 aa8.59□□□□□ -1.04
HERC4-210ENST00000480158 HMOX1P09601 288 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 PROM2Q8N271 834 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 USHBP1Q8N6Y0 703 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 C8orf37Q96NL8 207 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 PEAK1Q9H792 1746 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
HERC4-210ENST00000480158 CCDC146Q8IYE0 955 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 BTG4Q9NY30 223 aa8.58□□□□□ -1.04
HERC4-210ENST00000480158 IL13P35225 146 aa8.57□□□□□ -1.04
HERC4-210ENST00000480158 EVA1CP58658 441 aa8.57□□□□□ -1.04
HERC4-210ENST00000480158 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
HERC4-210ENST00000480158 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
HERC4-210ENST00000480158 NUDCQ9Y266 331 aa8.57□□□□□ -1.04
HERC4-210ENST00000480158 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
HERC4-210ENST00000480158 CDK12Q9NYV4 1490 aaPredicted RBP8.56□□□□□ -1.04
HERC4-210ENST00000480158 LTN1O94822 1766 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 NLRP2Q9NX02 1062 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 SMG6Q86US8 1419 aaKnown RBP8.56□□□□□ -1.04
HERC4-210ENST00000480158 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 INSRP06213 1382 aa8.56□□□□□ -1.04
HERC4-210ENST00000480158 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 EYA1Q99502 592 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 CRYBG1Q9Y4K1 1723 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 CPDO75976 1380 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
HERC4-210ENST00000480158 COL3A1P02461 1466 aaPredicted RBP8.55□□□□□ -1.04
HERC4-210ENST00000480158 SPATA31A6Q5VVP1 1343 aa8.55□□□□□ -1.04
HERC4-210ENST00000480158 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
HERC4-210ENST00000480158 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 RTL1A6NKG5 1358 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 ERBB3P21860 1342 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 LRP6O75581 1613 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 COL22A1Q8NFW1 1626 aaPredicted RBP8.54□□□□□ -1.04
HERC4-210ENST00000480158 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 CCDC9Q9Y3X0 531 aaKnown RBP8.54□□□□□ -1.04
HERC4-210ENST00000480158 CAMTA1Q9Y6Y1 1673 aa8.54□□□□□ -1.04
HERC4-210ENST00000480158 PRKAR2BP31323 418 aa8.53□□□□□ -1.04
HERC4-210ENST00000480158 KIF24Q5T7B8 1368 aa8.53□□□□□ -1.04
HERC4-210ENST00000480158 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
HERC4-210ENST00000480158 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
HERC4-210ENST00000480158 RRP7AQ9Y3A4 280 aaKnown RBP8.53□□□□□ -1.04
HERC4-210ENST00000480158 BLMP54132 1417 aaPredicted RBP8.52□□□□□ -1.04
HERC4-210ENST00000480158 RGPD5Q99666 1765 aa8.52□□□□□ -1.04
HERC4-210ENST00000480158 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
HERC4-210ENST00000480158 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
HERC4-210ENST00000480158 APAF1O14727 1248 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 USP21Q9UK80 565 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 WDR17Q8IZU2 1322 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 IGSF1Q8N6C5 1336 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 FCHSD2O94868 740 aa8.51□□□□□ -1.05
HERC4-210ENST00000480158 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
HERC4-210ENST00000480158 COL18A1P39060 1754 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms