RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
HPS1-212ENST00000480020 ABCC6O95255 1503 aa17.17■□□□□ 0.34
HPS1-212ENST00000480020 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
HPS1-212ENST00000480020 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
HPS1-212ENST00000480020 EVA1CP58658 441 aa17.16■□□□□ 0.34
HPS1-212ENST00000480020 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
HPS1-212ENST00000480020 SPATA31A1Q5TZJ5 1347 aa17.16■□□□□ 0.34
HPS1-212ENST00000480020 ONECUT3O60422 494 aaPredicted RBP17.15■□□□□ 0.34
HPS1-212ENST00000480020 FBLN1P23142 703 aa17.15■□□□□ 0.34
HPS1-212ENST00000480020 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
HPS1-212ENST00000480020 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
HPS1-212ENST00000480020 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
HPS1-212ENST00000480020 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
HPS1-212ENST00000480020 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
HPS1-212ENST00000480020 LTN1O94822 1766 aa17.12■□□□□ 0.33
HPS1-212ENST00000480020 CRB1P82279 1406 aa17.12■□□□□ 0.33
HPS1-212ENST00000480020 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
HPS1-212ENST00000480020 IP6K1Q92551 441 aa17.11■□□□□ 0.33
HPS1-212ENST00000480020 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
HPS1-212ENST00000480020 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
HPS1-212ENST00000480020 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
HPS1-212ENST00000480020 ERBB3P21860 1342 aa17.1■□□□□ 0.33
HPS1-212ENST00000480020 NSD2O96028 1365 aa17.1■□□□□ 0.33
HPS1-212ENST00000480020 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
HPS1-212ENST00000480020 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
HPS1-212ENST00000480020 HOXC9P31274 260 aa17.09■□□□□ 0.33
HPS1-212ENST00000480020 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
HPS1-212ENST00000480020 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
HPS1-212ENST00000480020 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
HPS1-212ENST00000480020 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
HPS1-212ENST00000480020 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
HPS1-212ENST00000480020 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
HPS1-212ENST00000480020 AMPHP49418 695 aa17.08■□□□□ 0.32
HPS1-212ENST00000480020 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
HPS1-212ENST00000480020 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
HPS1-212ENST00000480020 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
HPS1-212ENST00000480020 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
HPS1-212ENST00000480020 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
HPS1-212ENST00000480020 A0A0G2JS52 829 aa17.06■□□□□ 0.32
HPS1-212ENST00000480020 MYT1Q01538 1121 aa17.06■□□□□ 0.32
HPS1-212ENST00000480020 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
HPS1-212ENST00000480020 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
HPS1-212ENST00000480020 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
HPS1-212ENST00000480020 FLT4P35916 1363 aa17.04■□□□□ 0.32
HPS1-212ENST00000480020 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
HPS1-212ENST00000480020 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
HPS1-212ENST00000480020 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
HPS1-212ENST00000480020 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
HPS1-212ENST00000480020 LTV1Q96GA3 475 aaPredicted RBP17.03■□□□□ 0.32
HPS1-212ENST00000480020 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
HPS1-212ENST00000480020 POLKQ9UBT6 870 aa17.03■□□□□ 0.32
HPS1-212ENST00000480020 INSRP06213 1382 aa17.02■□□□□ 0.32
HPS1-212ENST00000480020 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
HPS1-212ENST00000480020 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
HPS1-212ENST00000480020 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
HPS1-212ENST00000480020 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
HPS1-212ENST00000480020 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
HPS1-212ENST00000480020 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
HPS1-212ENST00000480020 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
HPS1-212ENST00000480020 CDCA7Q9BWT1 371 aaPredicted RBP16.99■□□□□ 0.31
HPS1-212ENST00000480020 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
HPS1-212ENST00000480020 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
HPS1-212ENST00000480020 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
HPS1-212ENST00000480020 LRRC37A3O60309 1634 aa16.97■□□□□ 0.31
HPS1-212ENST00000480020 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
HPS1-212ENST00000480020 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
HPS1-212ENST00000480020 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.31
HPS1-212ENST00000480020 PDE3BQ13370 1112 aa16.96■□□□□ 0.31
HPS1-212ENST00000480020 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
HPS1-212ENST00000480020 IL2RBP14784 551 aa16.95■□□□□ 0.3
HPS1-212ENST00000480020 DDB1Q16531 1140 aa16.95■□□□□ 0.3
HPS1-212ENST00000480020 EP400Q96L91 3159 aa16.94■□□□□ 0.3
HPS1-212ENST00000480020 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
HPS1-212ENST00000480020 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
HPS1-212ENST00000480020 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
HPS1-212ENST00000480020 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
HPS1-212ENST00000480020 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
HPS1-212ENST00000480020 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
HPS1-212ENST00000480020 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
HPS1-212ENST00000480020 MEGF6O75095 1541 aa16.91■□□□□ 0.3
HPS1-212ENST00000480020 EXOC5O00471 708 aa16.91■□□□□ 0.3
HPS1-212ENST00000480020 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
HPS1-212ENST00000480020 MTHFSP49914 203 aa16.9■□□□□ 0.3
HPS1-212ENST00000480020 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
HPS1-212ENST00000480020 EYA1Q99502 592 aa16.9■□□□□ 0.3
HPS1-212ENST00000480020 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
HPS1-212ENST00000480020 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
HPS1-212ENST00000480020 BCL9O00512 1426 aa16.87■□□□□ 0.29
HPS1-212ENST00000480020 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
HPS1-212ENST00000480020 IL13P35225 146 aa16.86■□□□□ 0.29
HPS1-212ENST00000480020 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
HPS1-212ENST00000480020 TRIM37O94972 964 aa16.85■□□□□ 0.29
HPS1-212ENST00000480020 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
HPS1-212ENST00000480020 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
HPS1-212ENST00000480020 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
HPS1-212ENST00000480020 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
HPS1-212ENST00000480020 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
HPS1-212ENST00000480020 SF3B2Q13435 895 aaKnown RBP16.83■□□□□ 0.28
HPS1-212ENST00000480020 DEFB132Q7Z7B7 95 aa16.83■□□□□ 0.28
HPS1-212ENST00000480020 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms