RNA–Protein interactions for RNA: ENST00000479992.5

RPL13A-209, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-209ENST00000479992 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
RPL13A-209ENST00000479992 AXIN2Q9Y2T1 843 aa22.01■■□□□ 1.11
RPL13A-209ENST00000479992 LTN1O94822 1766 aa22.01■■□□□ 1.11
RPL13A-209ENST00000479992 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
RPL13A-209ENST00000479992 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
RPL13A-209ENST00000479992 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
RPL13A-209ENST00000479992 ABCC6O95255 1503 aa22■■□□□ 1.11
RPL13A-209ENST00000479992 SOCS7O14512 581 aa21.99■■□□□ 1.11
RPL13A-209ENST00000479992 FBLN1P23142 703 aa21.99■■□□□ 1.11
RPL13A-209ENST00000479992 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
RPL13A-209ENST00000479992 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
RPL13A-209ENST00000479992 SPATA31A1Q5TZJ5 1347 aa21.97■■□□□ 1.11
RPL13A-209ENST00000479992 A0A0G2JS52 829 aa21.96■■□□□ 1.11
RPL13A-209ENST00000479992 MYT1Q01538 1121 aa21.96■■□□□ 1.11
RPL13A-209ENST00000479992 MAP3K19Q56UN5 1328 aa21.96■■□□□ 1.11
RPL13A-209ENST00000479992 RGPD5Q99666 1765 aa21.95■■□□□ 1.1
RPL13A-209ENST00000479992 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
RPL13A-209ENST00000479992 CRB1P82279 1406 aa21.95■■□□□ 1.1
RPL13A-209ENST00000479992 PER1O15534 1290 aaPredicted RBP21.94■■□□□ 1.1
RPL13A-209ENST00000479992 CSB-PGBD3P0DP91 1061 aa21.94■■□□□ 1.1
RPL13A-209ENST00000479992 SEPT12Q8IYM1 358 aa21.94■■□□□ 1.1
RPL13A-209ENST00000479992 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
RPL13A-209ENST00000479992 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
RPL13A-209ENST00000479992 ANKRD26Q9UPS8 1709 aa21.93■■□□□ 1.1
RPL13A-209ENST00000479992 TOM1L2Q6ZVM7 507 aa21.92■■□□□ 1.1
RPL13A-209ENST00000479992 BLMP54132 1417 aaPredicted RBP21.91■■□□□ 1.1
RPL13A-209ENST00000479992 NSD2O96028 1365 aa21.91■■□□□ 1.1
RPL13A-209ENST00000479992 ERBB3P21860 1342 aa21.91■■□□□ 1.1
RPL13A-209ENST00000479992 ONECUT3O60422 494 aaPredicted RBP21.91■■□□□ 1.1
RPL13A-209ENST00000479992 AMPHP49418 695 aa21.91■■□□□ 1.1
RPL13A-209ENST00000479992 IP6K1Q92551 441 aa21.91■■□□□ 1.1
RPL13A-209ENST00000479992 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
RPL13A-209ENST00000479992 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
RPL13A-209ENST00000479992 ANKRD24Q8TF21 1146 aa21.9■■□□□ 1.1
RPL13A-209ENST00000479992 RTL1A6NKG5 1358 aa21.89■■□□□ 1.1
RPL13A-209ENST00000479992 HOXC9P31274 260 aa21.89■■□□□ 1.09
RPL13A-209ENST00000479992 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.09
RPL13A-209ENST00000479992 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
RPL13A-209ENST00000479992 LTV1Q96GA3 475 aaPredicted RBP21.88■■□□□ 1.09
RPL13A-209ENST00000479992 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
RPL13A-209ENST00000479992 BARGINQ6ZT62 677 aa21.87■■□□□ 1.09
RPL13A-209ENST00000479992 EMILIN1Q9Y6C2 1016 aa21.87■■□□□ 1.09
RPL13A-209ENST00000479992 BRWD3Q6RI45 1802 aa21.87■■□□□ 1.09
RPL13A-209ENST00000479992 THRAP3Q9Y2W1 955 aaKnown RBP21.86■■□□□ 1.09
RPL13A-209ENST00000479992 MORC1Q86VD1 984 aa21.85■■□□□ 1.09
RPL13A-209ENST00000479992 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
RPL13A-209ENST00000479992 NLRP2Q9NX02 1062 aa21.85■■□□□ 1.09
RPL13A-209ENST00000479992 FLT4P35916 1363 aa21.85■■□□□ 1.09
RPL13A-209ENST00000479992 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
RPL13A-209ENST00000479992 KRT27Q7Z3Y8 459 aa21.84■■□□□ 1.09
RPL13A-209ENST00000479992 KIF24Q5T7B8 1368 aa21.83■■□□□ 1.08
RPL13A-209ENST00000479992 NPC1L1Q9UHC9 1359 aa21.83■■□□□ 1.08
RPL13A-209ENST00000479992 WNK3Q9BYP7 1800 aa21.83■■□□□ 1.08
RPL13A-209ENST00000479992 EP400Q96L91 3159 aa21.82■■□□□ 1.08
RPL13A-209ENST00000479992 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
RPL13A-209ENST00000479992 CC2D1BQ5T0F9 858 aaKnown RBP21.82■■□□□ 1.08
RPL13A-209ENST00000479992 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
RPL13A-209ENST00000479992 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
RPL13A-209ENST00000479992 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
RPL13A-209ENST00000479992 POLKQ9UBT6 870 aa21.81■■□□□ 1.08
RPL13A-209ENST00000479992 INSRP06213 1382 aa21.81■■□□□ 1.08
RPL13A-209ENST00000479992 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
RPL13A-209ENST00000479992 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
RPL13A-209ENST00000479992 DISP2A7MBM2 1401 aa21.8■■□□□ 1.08
RPL13A-209ENST00000479992 UPF1Q92900 1129 aaKnown RBP eCLIP21.79■■□□□ 1.084e-13■□□□□ 9.4
RPL13A-209ENST00000479992 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
RPL13A-209ENST00000479992 MAP2P11137 1827 aaKnown RBP21.78■■□□□ 1.08
RPL13A-209ENST00000479992 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
RPL13A-209ENST00000479992 RGPD2P0DJD1 1756 aa21.75■■□□□ 1.07
RPL13A-209ENST00000479992 CDCA7Q9BWT1 371 aaPredicted RBP21.75■■□□□ 1.07
RPL13A-209ENST00000479992 DDB1Q16531 1140 aa21.74■■□□□ 1.07
RPL13A-209ENST00000479992 USHBP1Q8N6Y0 703 aa21.74■■□□□ 1.07
RPL13A-209ENST00000479992 IL2RBP14784 551 aa21.73■■□□□ 1.07
RPL13A-209ENST00000479992 NBPF6Q5VWK0 638 aa21.73■■□□□ 1.07
RPL13A-209ENST00000479992 NBPF4Q96M43 638 aa21.73■■□□□ 1.07
RPL13A-209ENST00000479992 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
RPL13A-209ENST00000479992 MEGF6O75095 1541 aa21.7■■□□□ 1.06
RPL13A-209ENST00000479992 EIF4A2Q14240 407 aaKnown RBP21.69■■□□□ 1.06
RPL13A-209ENST00000479992 EXOC5O00471 708 aa21.68■■□□□ 1.06
RPL13A-209ENST00000479992 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
RPL13A-209ENST00000479992 OVOS2A0A0G2JMS6 1433 aa21.68■■□□□ 1.06
RPL13A-209ENST00000479992 FAM196AQ6ZSG2 479 aa21.67■■□□□ 1.06
RPL13A-209ENST00000479992 NCAPD2Q15021 1401 aa21.66■■□□□ 1.06
RPL13A-209ENST00000479992 MTHFSP49914 203 aa21.66■■□□□ 1.06
RPL13A-209ENST00000479992 MARCH10Q8NA82 808 aaPredicted RBP21.66■■□□□ 1.06
RPL13A-209ENST00000479992 EYA1Q99502 592 aa21.65■■□□□ 1.06
RPL13A-209ENST00000479992 RAPGEF4Q8WZA2 1011 aa21.64■■□□□ 1.05
RPL13A-209ENST00000479992 CCDC125Q86Z20 511 aa21.63■■□□□ 1.05
RPL13A-209ENST00000479992 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
RPL13A-209ENST00000479992 RGPD1P0DJD0 1748 aa21.62■■□□□ 1.05
RPL13A-209ENST00000479992 TRIM37O94972 964 aa21.61■■□□□ 1.05
RPL13A-209ENST00000479992 TATP17735 454 aaPredicted RBP21.61■■□□□ 1.05
RPL13A-209ENST00000479992 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
RPL13A-209ENST00000479992 IGSF1Q8N6C5 1336 aa21.6■■□□□ 1.05
RPL13A-209ENST00000479992 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
RPL13A-209ENST00000479992 ZCRB1Q8TBF4 217 aaKnown RBP21.59■■□□□ 1.05
RPL13A-209ENST00000479992 SHANK3Q9BYB0 1731 aa21.59■■□□□ 1.05
RPL13A-209ENST00000479992 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.05
RPL13A-209ENST00000479992 IL13P35225 146 aa21.58■■□□□ 1.05
RPL13A-209ENST00000479992 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms