RNA–Protein interactions for RNA: ENST00000479977.6

VAV3-205, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-205ENST00000479977 USP17L8P0C7I0 530 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 GRM5P41594 1212 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
VAV3-205ENST00000479977 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
VAV3-205ENST00000479977 ARMC2Q8NEN0 867 aa8.3□□□□□ -1.08
VAV3-205ENST00000479977 MEIOBQ8N635 442 aa8.29□□□□□ -1.08
VAV3-205ENST00000479977 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
VAV3-205ENST00000479977 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
VAV3-205ENST00000479977 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
VAV3-205ENST00000479977 BANK1Q8NDB2 785 aa8.27□□□□□ -1.09
VAV3-205ENST00000479977 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 VSIG8P0DPA2 414 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 NR6A1Q15406 480 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 SNRKQ9NRH2 765 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 DNMT3LQ9UJW3 386 aa8.26□□□□□ -1.09
VAV3-205ENST00000479977 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
VAV3-205ENST00000479977 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
VAV3-205ENST00000479977 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
VAV3-205ENST00000479977 MTMR14Q8NCE2 650 aa8.24□□□□□ -1.09
VAV3-205ENST00000479977 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
VAV3-205ENST00000479977 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
VAV3-205ENST00000479977 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
VAV3-205ENST00000479977 ERFEQ4G0M1 354 aa8.23□□□□□ -1.09
VAV3-205ENST00000479977 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
VAV3-205ENST00000479977 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
VAV3-205ENST00000479977 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
VAV3-205ENST00000479977 SOCS7O14512 581 aa8.21□□□□□ -1.1
VAV3-205ENST00000479977 CBLBQ13191 982 aa8.21□□□□□ -1.1
VAV3-205ENST00000479977 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
VAV3-205ENST00000479977 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
VAV3-205ENST00000479977 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
VAV3-205ENST00000479977 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
VAV3-205ENST00000479977 SLC10A4Q96EP9 437 aa8.2□□□□□ -1.1
VAV3-205ENST00000479977 ARHGAP9Q9BRR9 750 aa8.2□□□□□ -1.1
VAV3-205ENST00000479977 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
VAV3-205ENST00000479977 MCM6Q14566 821 aa8.19□□□□□ -1.1
VAV3-205ENST00000479977 GPR37L1O60883 481 aa8.18□□□□□ -1.1
VAV3-205ENST00000479977 PTSQ03393 145 aa8.18□□□□□ -1.1
VAV3-205ENST00000479977 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
VAV3-205ENST00000479977 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
VAV3-205ENST00000479977 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
VAV3-205ENST00000479977 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
VAV3-205ENST00000479977 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
VAV3-205ENST00000479977 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
VAV3-205ENST00000479977 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
VAV3-205ENST00000479977 RELBQ01201 579 aa8.15□□□□□ -1.1
VAV3-205ENST00000479977 KRT76Q01546 638 aa8.15□□□□□ -1.1
VAV3-205ENST00000479977 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
VAV3-205ENST00000479977 AGBL1Q96MI9 1066 aa8.15□□□□□ -1.1
VAV3-205ENST00000479977 NDUFB9Q9Y6M9 179 aa8.15□□□□□ -1.1
VAV3-205ENST00000479977 SPINT1O43278 529 aa8.14□□□□□ -1.11
VAV3-205ENST00000479977 RAB15P59190 212 aa8.14□□□□□ -1.11
VAV3-205ENST00000479977 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
VAV3-205ENST00000479977 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
VAV3-205ENST00000479977 Q6ZVU0 165 aa8.14□□□□□ -1.11
VAV3-205ENST00000479977 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
VAV3-205ENST00000479977 CDV3Q9UKY7 258 aaKnown RBP8.14□□□□□ -1.11
VAV3-205ENST00000479977 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
VAV3-205ENST00000479977 CDC14CA4D256 554 aa8.13□□□□□ -1.11
VAV3-205ENST00000479977 APBB1O00213 710 aa8.13□□□□□ -1.11
VAV3-205ENST00000479977 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
VAV3-205ENST00000479977 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
VAV3-205ENST00000479977 POLMQ9NP87 494 aaPredicted RBP8.13□□□□□ -1.11
VAV3-205ENST00000479977 CTSOP43234 321 aaPredicted RBP8.12□□□□□ -1.11
VAV3-205ENST00000479977 FLIIQ13045 1269 aa8.12□□□□□ -1.11
VAV3-205ENST00000479977 INSM2Q96T92 566 aaPredicted RBP8.12□□□□□ -1.11
VAV3-205ENST00000479977 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
VAV3-205ENST00000479977 PTK2Q05397 1052 aa8.11□□□□□ -1.11
VAV3-205ENST00000479977 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
VAV3-205ENST00000479977 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
VAV3-205ENST00000479977 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
VAV3-205ENST00000479977 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
VAV3-205ENST00000479977 GDPD2Q9HCC8 539 aa8.1□□□□□ -1.11
VAV3-205ENST00000479977 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
VAV3-205ENST00000479977 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 IRF5Q13568 498 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 NBPF20Q3BBV1 942 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 RNFT1Q5M7Z0 435 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 POM121Q96HA1 1249 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
VAV3-205ENST00000479977 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
VAV3-205ENST00000479977 ZBBXA8MT70 800 aa8.08□□□□□ -1.12
VAV3-205ENST00000479977 ITGA6P23229 1130 aa8.08□□□□□ -1.12
VAV3-205ENST00000479977 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
VAV3-205ENST00000479977 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
VAV3-205ENST00000479977 ZNF784Q8NCA9 323 aaPredicted RBP8.07□□□□□ -1.12
VAV3-205ENST00000479977 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
VAV3-205ENST00000479977 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
VAV3-205ENST00000479977 RNF225M0QZC1 329 aaPredicted RBP8.06□□□□□ -1.12
VAV3-205ENST00000479977 ABL2P42684 1182 aa8.06□□□□□ -1.12
VAV3-205ENST00000479977 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
VAV3-205ENST00000479977 SV2AQ7L0J3 742 aa8.06□□□□□ -1.12
VAV3-205ENST00000479977 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms