RNA–Protein interactions for RNA: ENST00000479977.6

VAV3-205, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-205ENST00000479977 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
VAV3-205ENST00000479977 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
VAV3-205ENST00000479977 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
VAV3-205ENST00000479977 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
VAV3-205ENST00000479977 FOXD1Q16676 465 aa19.22■□□□□ 0.67
VAV3-205ENST00000479977 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
VAV3-205ENST00000479977 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
VAV3-205ENST00000479977 MSH5O43196 834 aa18■□□□□ 0.47
VAV3-205ENST00000479977 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
VAV3-205ENST00000479977 ADRA2BP18089 450 aa17.93■□□□□ 0.46
VAV3-205ENST00000479977 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
VAV3-205ENST00000479977 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
VAV3-205ENST00000479977 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
VAV3-205ENST00000479977 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
VAV3-205ENST00000479977 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
VAV3-205ENST00000479977 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
VAV3-205ENST00000479977 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
VAV3-205ENST00000479977 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
VAV3-205ENST00000479977 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
VAV3-205ENST00000479977 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
VAV3-205ENST00000479977 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
VAV3-205ENST00000479977 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
VAV3-205ENST00000479977 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
VAV3-205ENST00000479977 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
VAV3-205ENST00000479977 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
VAV3-205ENST00000479977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
VAV3-205ENST00000479977 KCNA4P22459 653 aa14.93□□□□□ -0.02
VAV3-205ENST00000479977 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
VAV3-205ENST00000479977 CAPN15O75808 1086 aa14.52□□□□□ -0.09
VAV3-205ENST00000479977 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
VAV3-205ENST00000479977 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
VAV3-205ENST00000479977 DSG3P32926 999 aa14.37□□□□□ -0.11
VAV3-205ENST00000479977 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
VAV3-205ENST00000479977 APLP2Q06481 763 aa14.29□□□□□ -0.12
VAV3-205ENST00000479977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
VAV3-205ENST00000479977 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
VAV3-205ENST00000479977 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
VAV3-205ENST00000479977 ABCB7O75027 752 aa14.2□□□□□ -0.14
VAV3-205ENST00000479977 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
VAV3-205ENST00000479977 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
VAV3-205ENST00000479977 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
VAV3-205ENST00000479977 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
VAV3-205ENST00000479977 POLA2Q14181 598 aa13.86□□□□□ -0.19
VAV3-205ENST00000479977 POTEHQ6S545 545 aa13.82□□□□□ -0.2
VAV3-205ENST00000479977 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
VAV3-205ENST00000479977 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
VAV3-205ENST00000479977 ZBTB22O15209 634 aa13.7□□□□□ -0.22
VAV3-205ENST00000479977 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
VAV3-205ENST00000479977 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
VAV3-205ENST00000479977 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
VAV3-205ENST00000479977 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
VAV3-205ENST00000479977 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
VAV3-205ENST00000479977 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
VAV3-205ENST00000479977 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
VAV3-205ENST00000479977 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
VAV3-205ENST00000479977 FBLN2P98095 1184 aa13.25□□□□□ -0.29
VAV3-205ENST00000479977 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
VAV3-205ENST00000479977 SPDYE2BA6NHP3 402 aa13.13□□□□□ -0.31
VAV3-205ENST00000479977 SPDYE6P0CI01 402 aa13.13□□□□□ -0.31
VAV3-205ENST00000479977 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
VAV3-205ENST00000479977 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
VAV3-205ENST00000479977 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
VAV3-205ENST00000479977 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
VAV3-205ENST00000479977 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
VAV3-205ENST00000479977 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
VAV3-205ENST00000479977 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
VAV3-205ENST00000479977 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
VAV3-205ENST00000479977 HAX1O00165 279 aa12.92□□□□□ -0.34
VAV3-205ENST00000479977 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
VAV3-205ENST00000479977 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
VAV3-205ENST00000479977 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
VAV3-205ENST00000479977 EVX2Q03828 476 aa12.72□□□□□ -0.37
VAV3-205ENST00000479977 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
VAV3-205ENST00000479977 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
VAV3-205ENST00000479977 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
VAV3-205ENST00000479977 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
VAV3-205ENST00000479977 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
VAV3-205ENST00000479977 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
VAV3-205ENST00000479977 GABBR2O75899 941 aa12.43□□□□□ -0.42
VAV3-205ENST00000479977 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
VAV3-205ENST00000479977 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
VAV3-205ENST00000479977 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
VAV3-205ENST00000479977 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
VAV3-205ENST00000479977 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
VAV3-205ENST00000479977 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
VAV3-205ENST00000479977 CLCN6P51797 869 aa12.15□□□□□ -0.46
VAV3-205ENST00000479977 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
VAV3-205ENST00000479977 LHX8Q68G74 356 aa12.14□□□□□ -0.47
VAV3-205ENST00000479977 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
VAV3-205ENST00000479977 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
VAV3-205ENST00000479977 PROM2Q8N271 834 aa12.11□□□□□ -0.47
VAV3-205ENST00000479977 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
VAV3-205ENST00000479977 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
VAV3-205ENST00000479977 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
VAV3-205ENST00000479977 FKBP8Q14318 412 aa11.97□□□□□ -0.49
VAV3-205ENST00000479977 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
VAV3-205ENST00000479977 MIER1Q8N108 512 aa11.95□□□□□ -0.5
VAV3-205ENST00000479977 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
VAV3-205ENST00000479977 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
VAV3-205ENST00000479977 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms