RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CRB1P82279 1406 aa12.5□□□□□ -0.41
DDX56-211ENST00000479602 PLSCR1O15162 318 aa12.49□□□□□ -0.41
DDX56-211ENST00000479602 CDCA8Q53HL2 280 aa12.49□□□□□ -0.41
DDX56-211ENST00000479602 COL18A1P39060 1754 aa12.48□□□□□ -0.41
DDX56-211ENST00000479602 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
DDX56-211ENST00000479602 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
DDX56-211ENST00000479602 PROM2Q8N271 834 aa12.48□□□□□ -0.41
DDX56-211ENST00000479602 USP31Q70CQ4 1352 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 TTC21AQ8NDW8 1320 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 PTF1AQ7RTS3 328 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
DDX56-211ENST00000479602 KCNH5Q8NCM2 988 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
DDX56-211ENST00000479602 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
DDX56-211ENST00000479602 MYOM1P52179 1685 aa12.45□□□□□ -0.42
DDX56-211ENST00000479602 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
DDX56-211ENST00000479602 TMF1P82094 1093 aa12.45□□□□□ -0.42
DDX56-211ENST00000479602 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
DDX56-211ENST00000479602 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
DDX56-211ENST00000479602 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
DDX56-211ENST00000479602 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
DDX56-211ENST00000479602 DDB1Q16531 1140 aa12.44□□□□□ -0.42
DDX56-211ENST00000479602 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
DDX56-211ENST00000479602 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
DDX56-211ENST00000479602 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
DDX56-211ENST00000479602 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
DDX56-211ENST00000479602 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
DDX56-211ENST00000479602 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 UTRNP46939 3433 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 NFAT5O94916 1531 aa12.42□□□□□ -0.42
DDX56-211ENST00000479602 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
DDX56-211ENST00000479602 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
DDX56-211ENST00000479602 RREB1Q92766 1687 aa12.4□□□□□ -0.42
DDX56-211ENST00000479602 EXOC5O00471 708 aa12.39□□□□□ -0.43
DDX56-211ENST00000479602 KCNQ2O43526 872 aa12.39□□□□□ -0.43
DDX56-211ENST00000479602 NME9Q86XW9 330 aa12.39□□□□□ -0.43
DDX56-211ENST00000479602 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
DDX56-211ENST00000479602 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
DDX56-211ENST00000479602 ABCC6O95255 1503 aa12.38□□□□□ -0.43
DDX56-211ENST00000479602 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
DDX56-211ENST00000479602 ERBB3P21860 1342 aa12.37□□□□□ -0.43
DDX56-211ENST00000479602 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
DDX56-211ENST00000479602 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
DDX56-211ENST00000479602 PDGFDQ9GZP0 370 aaPredicted RBP12.37□□□□□ -0.43
DDX56-211ENST00000479602 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
DDX56-211ENST00000479602 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
DDX56-211ENST00000479602 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
DDX56-211ENST00000479602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX56-211ENST00000479602 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
DDX56-211ENST00000479602 PTGER2P43116 358 aa12.35□□□□□ -0.43
DDX56-211ENST00000479602 TXNRD1Q16881 649 aa12.35□□□□□ -0.43
DDX56-211ENST00000479602 IP6K1Q92551 441 aa12.35□□□□□ -0.43
DDX56-211ENST00000479602 NPC1L1Q9UHC9 1359 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 RGPD3A6NKT7 1758 aaPredicted RBP12.34□□□□□ -0.43
DDX56-211ENST00000479602 RGPD4Q7Z3J3 1758 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 SOX12O15370 315 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
DDX56-211ENST00000479602 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
DDX56-211ENST00000479602 SLC15A2Q16348 729 aa12.33□□□□□ -0.44
DDX56-211ENST00000479602 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
DDX56-211ENST00000479602 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
DDX56-211ENST00000479602 NSD2O96028 1365 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 IL2RBP14784 551 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
DDX56-211ENST00000479602 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
DDX56-211ENST00000479602 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
DDX56-211ENST00000479602 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
DDX56-211ENST00000479602 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
DDX56-211ENST00000479602 FBLN1P23142 703 aa12.29□□□□□ -0.44
DDX56-211ENST00000479602 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
DDX56-211ENST00000479602 KIF20BQ96Q89 1820 aa12.28□□□□□ -0.44
DDX56-211ENST00000479602 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
DDX56-211ENST00000479602 FYB1O15117 783 aa12.28□□□□□ -0.44
DDX56-211ENST00000479602 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
DDX56-211ENST00000479602 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
DDX56-211ENST00000479602 HOXC9P31274 260 aa12.27□□□□□ -0.45
DDX56-211ENST00000479602 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
DDX56-211ENST00000479602 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
DDX56-211ENST00000479602 STK32BQ9NY57 414 aa12.27□□□□□ -0.45
DDX56-211ENST00000479602 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
DDX56-211ENST00000479602 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
DDX56-211ENST00000479602 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
DDX56-211ENST00000479602 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
DDX56-211ENST00000479602 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
DDX56-211ENST00000479602 COG3Q96JB2 828 aa12.25□□□□□ -0.45
DDX56-211ENST00000479602 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
DDX56-211ENST00000479602 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
DDX56-211ENST00000479602 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
DDX56-211ENST00000479602 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
DDX56-211ENST00000479602 PPP1R1BQ9UD71 204 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms