RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 GGCXP38435 758 aa9.73□□□□□ -0.85
BRAF-203ENST00000479537 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
BRAF-203ENST00000479537 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
BRAF-203ENST00000479537 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
BRAF-203ENST00000479537 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
BRAF-203ENST00000479537 EML3Q32P44 896 aa9.72□□□□□ -0.85
BRAF-203ENST00000479537 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
BRAF-203ENST00000479537 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
BRAF-203ENST00000479537 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
BRAF-203ENST00000479537 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
BRAF-203ENST00000479537 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.86
BRAF-203ENST00000479537 DOLKQ9UPQ8 538 aa9.71□□□□□ -0.86
BRAF-203ENST00000479537 ATP5J2-PTCD1G3V325 749 aa9.7□□□□□ -0.86
BRAF-203ENST00000479537 RASA1P20936 1047 aa9.7□□□□□ -0.86
BRAF-203ENST00000479537 MAP7D1Q3KQU3 841 aa9.7□□□□□ -0.86
BRAF-203ENST00000479537 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
BRAF-203ENST00000479537 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
BRAF-203ENST00000479537 A0A0G2JS52 829 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L21D6R901 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 LZTS3O60299 673 aaPredicted RBP9.69□□□□□ -0.86
BRAF-203ENST00000479537 GIGYF1O75420 1035 aaPredicted RBP9.69□□□□□ -0.86
BRAF-203ENST00000479537 BRD1O95696 1058 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
BRAF-203ENST00000479537 RAB15P59190 212 aa9.68□□□□□ -0.86
BRAF-203ENST00000479537 SH3BP2P78314 561 aa9.68□□□□□ -0.86
BRAF-203ENST00000479537 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
BRAF-203ENST00000479537 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
BRAF-203ENST00000479537 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
BRAF-203ENST00000479537 ELOAQ14241 798 aaKnown RBP9.67□□□□□ -0.86
BRAF-203ENST00000479537 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
BRAF-203ENST00000479537 TRIM50Q86XT4 487 aa9.67□□□□□ -0.86
BRAF-203ENST00000479537 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
BRAF-203ENST00000479537 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
BRAF-203ENST00000479537 ZMIZ1Q9ULJ6 1067 aa9.67□□□□□ -0.86
BRAF-203ENST00000479537 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
BRAF-203ENST00000479537 KCNA1Q09470 495 aa9.66□□□□□ -0.86
BRAF-203ENST00000479537 TRIM32Q13049 653 aa9.66□□□□□ -0.86
BRAF-203ENST00000479537 TMEM164Q5U3C3 297 aa9.66□□□□□ -0.86
BRAF-203ENST00000479537 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
BRAF-203ENST00000479537 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
BRAF-203ENST00000479537 GZF1Q9H116 711 aaPredicted RBP9.66□□□□□ -0.86
BRAF-203ENST00000479537 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 TSGA10IPQ3SY00 556 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 FAM200AQ8TCP9 573 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 CDV3Q9UKY7 258 aaKnown RBP9.65□□□□□ -0.86
BRAF-203ENST00000479537 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
BRAF-203ENST00000479537 PCDHB11Q9Y5F2 797 aa9.65□□□□□ -0.86
BRAF-203ENST00000479537 PSME1Q06323 249 aa9.64□□□□□ -0.87
BRAF-203ENST00000479537 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
BRAF-203ENST00000479537 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
BRAF-203ENST00000479537 PTK7Q13308 1070 aa9.63□□□□□ -0.87
BRAF-203ENST00000479537 DNAAF2Q9NVR5 837 aaKnown RBP9.63□□□□□ -0.87
BRAF-203ENST00000479537 CHIC2Q9UKJ5 165 aa9.63□□□□□ -0.87
BRAF-203ENST00000479537 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
BRAF-203ENST00000479537 WNT7BP56706 349 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 ARID5BQ14865 1188 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
BRAF-203ENST00000479537 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
BRAF-203ENST00000479537 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 SIRT1Q96EB6 747 aa9.62□□□□□ -0.87
BRAF-203ENST00000479537 GTF2IP78347 998 aa9.61□□□□□ -0.87
BRAF-203ENST00000479537 DPYDQ12882 1025 aa9.61□□□□□ -0.87
BRAF-203ENST00000479537 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
BRAF-203ENST00000479537 CDCA7Q9BWT1 371 aaPredicted RBP9.61□□□□□ -0.87
BRAF-203ENST00000479537 ESF1Q9H501 851 aaKnown RBP9.61□□□□□ -0.87
BRAF-203ENST00000479537 CLDN10P78369 228 aa9.6□□□□□ -0.87
BRAF-203ENST00000479537 SKOR1P84550 965 aa9.6□□□□□ -0.87
BRAF-203ENST00000479537 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
BRAF-203ENST00000479537 ESPNB1AK53 854 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
BRAF-203ENST00000479537 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.87
BRAF-203ENST00000479537 RPIAP49247 311 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 USP4Q13107 963 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 LARGE2Q8N3Y3 721 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
BRAF-203ENST00000479537 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
BRAF-203ENST00000479537 PRKD2Q9BZL6 878 aa9.58□□□□□ -0.88
BRAF-203ENST00000479537 SLC19A1P41440 591 aa9.57□□□□□ -0.88
BRAF-203ENST00000479537 TPCN2Q8NHX9 752 aa9.57□□□□□ -0.88
BRAF-203ENST00000479537 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms