RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 GJD4Q96KN9 370 aaPredicted RBP34.16■■■■□ 3.06
PERM1-203ENST00000479361 LTN1O94822 1766 aa34.16■■■■□ 3.06
PERM1-203ENST00000479361 COL18A1P39060 1754 aa34.16■■■■□ 3.06
PERM1-203ENST00000479361 MAP3K19Q56UN5 1328 aa34.15■■■■□ 3.06
PERM1-203ENST00000479361 COL5A2P05997 1499 aaPredicted RBP34.14■■■■□ 3.06
PERM1-203ENST00000479361 MORC1Q86VD1 984 aa34.14■■■■□ 3.06
PERM1-203ENST00000479361 AXIN2Q9Y2T1 843 aa34.14■■■■□ 3.06
PERM1-203ENST00000479361 FBLN1P23142 703 aa34.13■■■■□ 3.05
PERM1-203ENST00000479361 AMPHP49418 695 aa34.13■■■■□ 3.05
PERM1-203ENST00000479361 NPC1L1Q9UHC9 1359 aa34.12■■■■□ 3.05
PERM1-203ENST00000479361 RRS1Q15050 365 aaKnown RBP34.12■■■■□ 3.05
PERM1-203ENST00000479361 IP6K1Q92551 441 aa34.11■■■■□ 3.05
PERM1-203ENST00000479361 RTL1A6NKG5 1358 aa34.11■■■■□ 3.05
PERM1-203ENST00000479361 BLMP54132 1417 aaPredicted RBP34.1■■■■□ 3.05
PERM1-203ENST00000479361 KIF24Q5T7B8 1368 aa34.09■■■■□ 3.05
PERM1-203ENST00000479361 SPATA31A5Q5VU36 1347 aa34.08■■■■□ 3.05
PERM1-203ENST00000479361 SPATA31A7Q8IWB4 1347 aa34.08■■■■□ 3.05
PERM1-203ENST00000479361 TNNT2P45379 298 aaPredicted RBP34.08■■■■□ 3.05
PERM1-203ENST00000479361 LARP1Q6PKG0 1096 aaKnown RBP34.08■■■■□ 3.05
PERM1-203ENST00000479361 ZNF316A6NFI3 1004 aaPredicted RBP34.07■■■■□ 3.04
PERM1-203ENST00000479361 CC2D1BQ5T0F9 858 aaKnown RBP34.07■■■■□ 3.04
PERM1-203ENST00000479361 HOXC9P31274 260 aa34.06■■■■□ 3.04
PERM1-203ENST00000479361 CDK12Q9NYV4 1490 aaPredicted RBP34.06■■■■□ 3.04
PERM1-203ENST00000479361 WDR17Q8IZU2 1322 aa34.05■■■■□ 3.04
PERM1-203ENST00000479361 CSB-PGBD3P0DP91 1061 aa34.05■■■■□ 3.04
PERM1-203ENST00000479361 DDX10Q13206 875 aaKnown RBP34.05■■■■□ 3.04
PERM1-203ENST00000479361 CRB1P82279 1406 aa34.04■■■■□ 3.04
PERM1-203ENST00000479361 SPATA31A1Q5TZJ5 1347 aa34.04■■■■□ 3.04
PERM1-203ENST00000479361 GLI3P10071 1580 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 FLT4P35916 1363 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 TOM1L2Q6ZVM7 507 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 ILDR2Q71H61 639 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 RGPD5Q99666 1765 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 ERBB3P21860 1342 aa34.03■■■■□ 3.04
PERM1-203ENST00000479361 ANKRD24Q8TF21 1146 aa34.02■■■■□ 3.04
PERM1-203ENST00000479361 EMILIN1Q9Y6C2 1016 aa34.02■■■■□ 3.04
PERM1-203ENST00000479361 PPM1GO15355 546 aaPredicted RBP34.01■■■■□ 3.03
PERM1-203ENST00000479361 POLKQ9UBT6 870 aa34.01■■■■□ 3.03
PERM1-203ENST00000479361 USP35Q9P2H5 1018 aa33.99■■■■□ 3.03
PERM1-203ENST00000479361 CNGB1Q14028 1251 aaPredicted RBP33.98■■■■□ 3.03
PERM1-203ENST00000479361 THRAP3Q9Y2W1 955 aaKnown RBP33.98■■■■□ 3.03
PERM1-203ENST00000479361 INSRP06213 1382 aa33.98■■■■□ 3.03
PERM1-203ENST00000479361 TCP11L2Q8N4U5 519 aa33.97■■■■□ 3.03
PERM1-203ENST00000479361 MAP2P11137 1827 aaKnown RBP33.97■■■■□ 3.03
PERM1-203ENST00000479361 ONECUT3O60422 494 aaPredicted RBP33.96■■■■□ 3.03
PERM1-203ENST00000479361 FAM98CQ17RN3 349 aaKnown RBP33.96■■■■□ 3.03
PERM1-203ENST00000479361 CARD10Q9BWT7 1032 aa33.96■■■■□ 3.03
PERM1-203ENST00000479361 PEAK1Q9H792 1746 aa33.96■■■■□ 3.03
PERM1-203ENST00000479361 RGS12O14924 1447 aa33.96■■■■□ 3.03
PERM1-203ENST00000479361 SMG6Q86US8 1419 aaKnown RBP33.96■■■■□ 3.03
PERM1-203ENST00000479361 HSP90AB2PQ58FF8 381 aa33.95■■■■□ 3.03
PERM1-203ENST00000479361 LTV1Q96GA3 475 aaPredicted RBP33.95■■■■□ 3.03
PERM1-203ENST00000479361 BARGINQ6ZT62 677 aa33.94■■■■□ 3.02
PERM1-203ENST00000479361 NLRP2Q9NX02 1062 aa33.94■■■■□ 3.02
PERM1-203ENST00000479361 A0A0G2JS52 829 aa33.92■■■■□ 3.02
PERM1-203ENST00000479361 MYT1Q01538 1121 aa33.92■■■■□ 3.02
PERM1-203ENST00000479361 SEPT12Q8IYM1 358 aa33.9■■■■□ 3.02
PERM1-203ENST00000479361 FAM208AQ9UK61 1670 aaKnown RBP33.9■■■■□ 3.02
PERM1-203ENST00000479361 CDCA7Q9BWT1 371 aaPredicted RBP33.85■■■■□ 3.01
PERM1-203ENST00000479361 MTHFSP49914 203 aa33.84■■■■□ 3.01
PERM1-203ENST00000479361 THSD7AQ9UPZ6 1657 aa33.83■■■■□ 3.01
PERM1-203ENST00000479361 NBPF6Q5VWK0 638 aa33.79■■■■□ 3
PERM1-203ENST00000479361 NBPF4Q96M43 638 aa33.79■■■■□ 3
PERM1-203ENST00000479361 PARD3Q8TEW0 1356 aa33.79■■■■□ 3
PERM1-203ENST00000479361 EIF4A2Q14240 407 aaKnown RBP33.78■■■■□ 3
PERM1-203ENST00000479361 IL2RBP14784 551 aa33.76■■■□□ 2.99
PERM1-203ENST00000479361 PPP2R1AP30153 589 aa33.76■■■□□ 2.99
PERM1-203ENST00000479361 RALBP1Q15311 655 aa33.76■■■□□ 2.99
PERM1-203ENST00000479361 KRT27Q7Z3Y8 459 aa33.76■■■□□ 2.99
PERM1-203ENST00000479361 DISP2A7MBM2 1401 aa33.76■■■□□ 2.99
PERM1-203ENST00000479361 WNK3Q9BYP7 1800 aa33.74■■■□□ 2.99
PERM1-203ENST00000479361 PARP4Q9UKK3 1724 aaKnown RBP33.73■■■□□ 2.99
PERM1-203ENST00000479361 PDE3BQ13370 1112 aa33.73■■■□□ 2.99
PERM1-203ENST00000479361 RGPD2P0DJD1 1756 aa33.72■■■□□ 2.99
PERM1-203ENST00000479361 DDB1Q16531 1140 aa33.72■■■□□ 2.99
PERM1-203ENST00000479361 BRWD3Q6RI45 1802 aa33.72■■■□□ 2.99
PERM1-203ENST00000479361 USHBP1Q8N6Y0 703 aa33.71■■■□□ 2.99
PERM1-203ENST00000479361 CFAP53Q96M91 514 aa33.71■■■□□ 2.99
PERM1-203ENST00000479361 EYA1Q99502 592 aa33.71■■■□□ 2.99
PERM1-203ENST00000479361 EXOC5O00471 708 aa33.69■■■□□ 2.98
PERM1-203ENST00000479361 RAPGEF4Q8WZA2 1011 aa33.69■■■□□ 2.98
PERM1-203ENST00000479361 IL13P35225 146 aa33.68■■■□□ 2.98
PERM1-203ENST00000479361 NCAPD2Q15021 1401 aa33.68■■■□□ 2.98
PERM1-203ENST00000479361 DIAPH1O60610 1272 aaKnown RBP33.67■■■□□ 2.98
PERM1-203ENST00000479361 LRRC37A3O60309 1634 aa33.67■■■□□ 2.98
PERM1-203ENST00000479361 IGSF1Q8N6C5 1336 aa33.66■■■□□ 2.98
PERM1-203ENST00000479361 TNS2Q63HR2 1409 aa33.64■■■□□ 2.98
PERM1-203ENST00000479361 TATP17735 454 aaPredicted RBP33.64■■■□□ 2.98
PERM1-203ENST00000479361 SOCS7O14512 581 aa33.63■■■□□ 2.97
PERM1-203ENST00000479361 MEGF6O75095 1541 aa33.62■■■□□ 2.97
PERM1-203ENST00000479361 COL3A1P02461 1466 aaPredicted RBP33.62■■■□□ 2.97
PERM1-203ENST00000479361 PRKRIP1Q9H875 184 aaPredicted RBP33.61■■■□□ 2.97
PERM1-203ENST00000479361 OVOS2A0A0G2JMS6 1433 aa33.61■■■□□ 2.97
PERM1-203ENST00000479361 MYBBP1AQ9BQG0 1328 aaKnown RBP33.6■■■□□ 2.97
PERM1-203ENST00000479361 FAM196AQ6ZSG2 479 aa33.58■■■□□ 2.97
PERM1-203ENST00000479361 FAM182BQ5T319 152 aa33.57■■■□□ 2.96
PERM1-203ENST00000479361 ZCRB1Q8TBF4 217 aaKnown RBP33.57■■■□□ 2.96
PERM1-203ENST00000479361 RGPD1P0DJD0 1748 aa33.56■■■□□ 2.96
PERM1-203ENST00000479361 SULT6B1Q6IMI4 303 aa33.56■■■□□ 2.96
PERM1-203ENST00000479361 NUDCQ9Y266 331 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms