RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
PTPN18-210ENST00000479295 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
PTPN18-210ENST00000479295 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
PTPN18-210ENST00000479295 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
PTPN18-210ENST00000479295 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
PTPN18-210ENST00000479295 LTN1O94822 1766 aa13.48□□□□□ -0.25
PTPN18-210ENST00000479295 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
PTPN18-210ENST00000479295 EVA1CP58658 441 aa13.48□□□□□ -0.25
PTPN18-210ENST00000479295 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
PTPN18-210ENST00000479295 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
PTPN18-210ENST00000479295 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
PTPN18-210ENST00000479295 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
PTPN18-210ENST00000479295 IP6K1Q92551 441 aa13.47□□□□□ -0.25
PTPN18-210ENST00000479295 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
PTPN18-210ENST00000479295 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
PTPN18-210ENST00000479295 RGPD5Q99666 1765 aa13.47□□□□□ -0.25
PTPN18-210ENST00000479295 ERBB3P21860 1342 aa13.46□□□□□ -0.25
PTPN18-210ENST00000479295 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
PTPN18-210ENST00000479295 PANK3Q9H999 370 aa13.46□□□□□ -0.25
PTPN18-210ENST00000479295 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
PTPN18-210ENST00000479295 DISP2A7MBM2 1401 aa13.46□□□□□ -0.26
PTPN18-210ENST00000479295 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
PTPN18-210ENST00000479295 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
PTPN18-210ENST00000479295 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
PTPN18-210ENST00000479295 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
PTPN18-210ENST00000479295 NSD2O96028 1365 aa13.45□□□□□ -0.26
PTPN18-210ENST00000479295 SOX12O15370 315 aa13.44□□□□□ -0.26
PTPN18-210ENST00000479295 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
PTPN18-210ENST00000479295 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
PTPN18-210ENST00000479295 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
PTPN18-210ENST00000479295 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
PTPN18-210ENST00000479295 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
PTPN18-210ENST00000479295 HOXC9P31274 260 aa13.43□□□□□ -0.26
PTPN18-210ENST00000479295 CDCA7Q9BWT1 371 aaPredicted RBP13.43□□□□□ -0.26
PTPN18-210ENST00000479295 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
PTPN18-210ENST00000479295 FBLN1P23142 703 aa13.42□□□□□ -0.26
PTPN18-210ENST00000479295 TOM1L2Q6ZVM7 507 aa13.42□□□□□ -0.26
PTPN18-210ENST00000479295 FAM208AQ9UK61 1670 aaKnown RBP13.42□□□□□ -0.26
PTPN18-210ENST00000479295 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
PTPN18-210ENST00000479295 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
PTPN18-210ENST00000479295 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
PTPN18-210ENST00000479295 EP400Q96L91 3159 aa13.41□□□□□ -0.26
PTPN18-210ENST00000479295 BCL9O00512 1426 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
PTPN18-210ENST00000479295 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 USP35Q9P2H5 1018 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 INSRP06213 1382 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 FLT4P35916 1363 aa13.4□□□□□ -0.26
PTPN18-210ENST00000479295 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
PTPN18-210ENST00000479295 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
PTPN18-210ENST00000479295 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
PTPN18-210ENST00000479295 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
PTPN18-210ENST00000479295 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
PTPN18-210ENST00000479295 AMPHP49418 695 aa13.37□□□□□ -0.27
PTPN18-210ENST00000479295 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
PTPN18-210ENST00000479295 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
PTPN18-210ENST00000479295 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
PTPN18-210ENST00000479295 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
PTPN18-210ENST00000479295 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
PTPN18-210ENST00000479295 A0A0G2JS52 829 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 MYT1Q01538 1121 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 DDB1Q16531 1140 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PTPN18-210ENST00000479295 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
PTPN18-210ENST00000479295 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
PTPN18-210ENST00000479295 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
PTPN18-210ENST00000479295 IL2RBP14784 551 aa13.34□□□□□ -0.27
PTPN18-210ENST00000479295 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
PTPN18-210ENST00000479295 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
PTPN18-210ENST00000479295 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.27
PTPN18-210ENST00000479295 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
PTPN18-210ENST00000479295 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.28
PTPN18-210ENST00000479295 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
PTPN18-210ENST00000479295 EXOC5O00471 708 aa13.32□□□□□ -0.28
PTPN18-210ENST00000479295 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
PTPN18-210ENST00000479295 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
PTPN18-210ENST00000479295 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
PTPN18-210ENST00000479295 SBF2Q86WG5 1849 aa13.3□□□□□ -0.28
PTPN18-210ENST00000479295 MEGF6O75095 1541 aa13.3□□□□□ -0.28
PTPN18-210ENST00000479295 ZEB1P37275 1124 aaPredicted RBP13.29□□□□□ -0.28
PTPN18-210ENST00000479295 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
PTPN18-210ENST00000479295 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
PTPN18-210ENST00000479295 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
PTPN18-210ENST00000479295 EYA1Q99502 592 aa13.28□□□□□ -0.28
PTPN18-210ENST00000479295 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
PTPN18-210ENST00000479295 TRIM37O94972 964 aa13.27□□□□□ -0.29
PTPN18-210ENST00000479295 BAG6P46379 1132 aa13.27□□□□□ -0.29
PTPN18-210ENST00000479295 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
PTPN18-210ENST00000479295 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
PTPN18-210ENST00000479295 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
PTPN18-210ENST00000479295 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
PTPN18-210ENST00000479295 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
PTPN18-210ENST00000479295 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
PTPN18-210ENST00000479295 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
PTPN18-210ENST00000479295 PKD1L3Q7Z443 1732 aa13.25□□□□□ -0.29
PTPN18-210ENST00000479295 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
PTPN18-210ENST00000479295 PLSCR1O15162 318 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms