RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
VPS45-208ENST00000478999 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
VPS45-208ENST00000478999 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
VPS45-208ENST00000478999 ATP7BP35670 1465 aa11.49□□□□□ -0.57
VPS45-208ENST00000478999 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 OVOS2A0A0J9YW53 1432 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 OVOS2Q6IE36 1432 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 USP47Q96K76 1375 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 PLSCR1O15162 318 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 EVA1CP58658 441 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
VPS45-208ENST00000478999 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
VPS45-208ENST00000478999 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
VPS45-208ENST00000478999 CEP350Q5VT06 3117 aa11.46□□□□□ -0.57
VPS45-208ENST00000478999 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
VPS45-208ENST00000478999 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
VPS45-208ENST00000478999 NUTM2GQ5VZR2 741 aa11.46□□□□□ -0.57
VPS45-208ENST00000478999 PTF1AQ7RTS3 328 aa11.46□□□□□ -0.57
VPS45-208ENST00000478999 TRPM1Q7Z4N2 1603 aa11.46□□□□□ -0.58
VPS45-208ENST00000478999 COL5A2P05997 1499 aaPredicted RBP11.45□□□□□ -0.58
VPS45-208ENST00000478999 PROM2Q8N271 834 aa11.45□□□□□ -0.58
VPS45-208ENST00000478999 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
VPS45-208ENST00000478999 KTN1Q86UP2 1357 aaKnown RBP11.44□□□□□ -0.58
VPS45-208ENST00000478999 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
VPS45-208ENST00000478999 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
VPS45-208ENST00000478999 THRAP3Q9Y2W1 955 aaKnown RBP11.44□□□□□ -0.58
VPS45-208ENST00000478999 CPDO75976 1380 aa11.43□□□□□ -0.58
VPS45-208ENST00000478999 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
VPS45-208ENST00000478999 SUPT16HQ9Y5B9 1047 aaKnown RBP11.43□□□□□ -0.58
VPS45-208ENST00000478999 COL18A1P39060 1754 aa11.42□□□□□ -0.58
VPS45-208ENST00000478999 C11orf95C9JLR9 678 aaPredicted RBP11.42□□□□□ -0.58
VPS45-208ENST00000478999 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
VPS45-208ENST00000478999 CRB1P82279 1406 aa11.42□□□□□ -0.58
VPS45-208ENST00000478999 PAPPAQ13219 1627 aa11.42□□□□□ -0.58
VPS45-208ENST00000478999 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
VPS45-208ENST00000478999 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
VPS45-208ENST00000478999 CDK19Q9BWU1 502 aa11.41□□□□□ -0.58
VPS45-208ENST00000478999 COL24A1Q17RW2 1714 aa11.4□□□□□ -0.58
VPS45-208ENST00000478999 USP19O94966 1318 aa11.4□□□□□ -0.58
VPS45-208ENST00000478999 NEFLP07196 543 aa11.4□□□□□ -0.58
VPS45-208ENST00000478999 MTFR1LQ9H019 292 aa11.4□□□□□ -0.58
VPS45-208ENST00000478999 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
VPS45-208ENST00000478999 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.59
VPS45-208ENST00000478999 NHSQ6T4R5 1651 aa11.4□□□□□ -0.59
VPS45-208ENST00000478999 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
VPS45-208ENST00000478999 SLC15A2Q16348 729 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 TXNRD1Q16881 649 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
VPS45-208ENST00000478999 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
VPS45-208ENST00000478999 ACEP12821 1306 aa11.38□□□□□ -0.59
VPS45-208ENST00000478999 CENPJQ9HC77 1338 aaPredicted RBP11.38□□□□□ -0.59
VPS45-208ENST00000478999 BCL9O00512 1426 aa11.38□□□□□ -0.59
VPS45-208ENST00000478999 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
VPS45-208ENST00000478999 DDB1Q16531 1140 aa11.38□□□□□ -0.59
VPS45-208ENST00000478999 BTAF1O14981 1849 aa11.37□□□□□ -0.59
VPS45-208ENST00000478999 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
VPS45-208ENST00000478999 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
VPS45-208ENST00000478999 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
VPS45-208ENST00000478999 ARXQ96QS3 562 aa11.37□□□□□ -0.59
VPS45-208ENST00000478999 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 GCP02774 474 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 NBPF1Q3BBV0 1214 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 ERICH6BQ5W0A0 696 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 CCDC61Q9Y6R9 512 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 AATKQ6ZMQ8 1374 aa11.36□□□□□ -0.59
VPS45-208ENST00000478999 SLIT3O75094 1523 aa11.35□□□□□ -0.59
VPS45-208ENST00000478999 GPR162Q16538 588 aa11.35□□□□□ -0.59
VPS45-208ENST00000478999 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
VPS45-208ENST00000478999 LTN1O94822 1766 aa11.34□□□□□ -0.59
VPS45-208ENST00000478999 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
VPS45-208ENST00000478999 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
VPS45-208ENST00000478999 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
VPS45-208ENST00000478999 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
VPS45-208ENST00000478999 NLRP13Q86W25 1043 aa11.33□□□□□ -0.6
VPS45-208ENST00000478999 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
VPS45-208ENST00000478999 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
VPS45-208ENST00000478999 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS45-208ENST00000478999 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
VPS45-208ENST00000478999 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
VPS45-208ENST00000478999 WDR17Q8IZU2 1322 aa11.31□□□□□ -0.6
VPS45-208ENST00000478999 RALBP1Q15311 655 aa11.3□□□□□ -0.6
VPS45-208ENST00000478999 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
VPS45-208ENST00000478999 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
VPS45-208ENST00000478999 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
VPS45-208ENST00000478999 INSRP06213 1382 aa11.29□□□□□ -0.6
VPS45-208ENST00000478999 USP6P35125 1406 aa11.29□□□□□ -0.6
VPS45-208ENST00000478999 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
VPS45-208ENST00000478999 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
VPS45-208ENST00000478999 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
VPS45-208ENST00000478999 ABCC6O95255 1503 aa11.29□□□□□ -0.6
VPS45-208ENST00000478999 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
VPS45-208ENST00000478999 ATP10DQ9P241 1426 aa11.28□□□□□ -0.6
VPS45-208ENST00000478999 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
VPS45-208ENST00000478999 NLRP6P59044 892 aa11.28□□□□□ -0.6
VPS45-208ENST00000478999 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms