RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
NCK1-206ENST00000478862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
NCK1-206ENST00000478862 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
NCK1-206ENST00000478862 DHX9Q08211 1270 aaKnown RBP8.18□□□□□ -1.1
NCK1-206ENST00000478862 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
NCK1-206ENST00000478862 SLC10A4Q96EP9 437 aa8.18□□□□□ -1.1
NCK1-206ENST00000478862 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
NCK1-206ENST00000478862 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
NCK1-206ENST00000478862 TTLL8A6PVC2 850 aa8.17□□□□□ -1.1
NCK1-206ENST00000478862 PDXDC2PQ6P474 469 aa8.17□□□□□ -1.1
NCK1-206ENST00000478862 ZBTB33Q86T24 672 aa8.17□□□□□ -1.1
NCK1-206ENST00000478862 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
NCK1-206ENST00000478862 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
NCK1-206ENST00000478862 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
NCK1-206ENST00000478862 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
NCK1-206ENST00000478862 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
NCK1-206ENST00000478862 DNMT3LQ9UJW3 386 aa8.15□□□□□ -1.1
NCK1-206ENST00000478862 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
NCK1-206ENST00000478862 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
NCK1-206ENST00000478862 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
NCK1-206ENST00000478862 KCTD15Q96SI1 283 aaPredicted RBP8.14□□□□□ -1.11
NCK1-206ENST00000478862 PTK2Q05397 1052 aa8.13□□□□□ -1.11
NCK1-206ENST00000478862 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
NCK1-206ENST00000478862 PTSQ03393 145 aa8.12□□□□□ -1.11
NCK1-206ENST00000478862 SKIV2LQ15477 1246 aaKnown RBP8.12□□□□□ -1.11
NCK1-206ENST00000478862 FIGNL2A6NMB9 653 aa8.11□□□□□ -1.11
NCK1-206ENST00000478862 Q6ZVU0 165 aa8.11□□□□□ -1.11
NCK1-206ENST00000478862 FAM117AQ9C073 453 aa8.11□□□□□ -1.11
NCK1-206ENST00000478862 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
NCK1-206ENST00000478862 SPINT1O43278 529 aa8.1□□□□□ -1.11
NCK1-206ENST00000478862 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
NCK1-206ENST00000478862 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
NCK1-206ENST00000478862 GPSM3Q9Y4H4 160 aa8.1□□□□□ -1.11
NCK1-206ENST00000478862 CBLBQ13191 982 aa8.09□□□□□ -1.11
NCK1-206ENST00000478862 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
NCK1-206ENST00000478862 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
NCK1-206ENST00000478862 CCDC155Q8N6L0 562 aa8.08□□□□□ -1.12
NCK1-206ENST00000478862 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
NCK1-206ENST00000478862 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
NCK1-206ENST00000478862 AP1G2O75843 785 aa8.07□□□□□ -1.12
NCK1-206ENST00000478862 RELBQ01201 579 aa8.07□□□□□ -1.12
NCK1-206ENST00000478862 NR6A1Q15406 480 aa8.07□□□□□ -1.12
NCK1-206ENST00000478862 POLMQ9NP87 494 aaPredicted RBP8.07□□□□□ -1.12
NCK1-206ENST00000478862 KCNMA1Q12791 1236 aa8.06□□□□□ -1.12
NCK1-206ENST00000478862 NANOS1Q8WY41 292 aaKnown RBP8.06□□□□□ -1.12
NCK1-206ENST00000478862 CDC14CA4D256 554 aa8.05□□□□□ -1.12
NCK1-206ENST00000478862 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
NCK1-206ENST00000478862 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
NCK1-206ENST00000478862 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
NCK1-206ENST00000478862 ADAM32Q8TC27 787 aa8.05□□□□□ -1.12
NCK1-206ENST00000478862 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
NCK1-206ENST00000478862 LOC100996750A0A140TA64 210 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 ITGA6P23229 1130 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 PPP2R2DQ66LE6 453 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 TMEM151AQ8N4L1 468 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
NCK1-206ENST00000478862 KRTAP4-6Q9BYQ5 205 aa8.04□□□□□ -1.12
NCK1-206ENST00000478862 SLC35F4A4IF30 521 aa8.03□□□□□ -1.12
NCK1-206ENST00000478862 RAB15P59190 212 aa8.03□□□□□ -1.12
NCK1-206ENST00000478862 SVOPQ8N4V2 548 aa8.03□□□□□ -1.12
NCK1-206ENST00000478862 GPR161Q8N6U8 529 aaKnown RBP8.03□□□□□ -1.12
NCK1-206ENST00000478862 CTSOP43234 321 aaPredicted RBP8.02□□□□□ -1.13
NCK1-206ENST00000478862 VWA5B2Q8N398 1253 aa8.02□□□□□ -1.13
NCK1-206ENST00000478862 PROCA1Q8NCQ7 364 aaPredicted RBP8.02□□□□□ -1.13
NCK1-206ENST00000478862 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.02□□□□□ -1.13
NCK1-206ENST00000478862 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
NCK1-206ENST00000478862 GDF11O95390 407 aa8.01□□□□□ -1.13
NCK1-206ENST00000478862 ZNF395Q9H8N7 513 aaPredicted RBP8.01□□□□□ -1.13
NCK1-206ENST00000478862 ADH1AP07327 375 aa8□□□□□ -1.13
NCK1-206ENST00000478862 MARSP56192 900 aaKnown RBP8□□□□□ -1.13
NCK1-206ENST00000478862 KRT76Q01546 638 aa8□□□□□ -1.13
NCK1-206ENST00000478862 GTF3C3Q9Y5Q9 886 aa8□□□□□ -1.13
NCK1-206ENST00000478862 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
NCK1-206ENST00000478862 RASSF7Q02833 373 aa7.99□□□□□ -1.13
NCK1-206ENST00000478862 SEPT12Q8IYM1 358 aa7.99□□□□□ -1.13
NCK1-206ENST00000478862 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
NCK1-206ENST00000478862 ZNF784Q8NCA9 323 aaPredicted RBP7.99□□□□□ -1.13
NCK1-206ENST00000478862 RNF217Q8TC41 542 aa7.99□□□□□ -1.13
NCK1-206ENST00000478862 ERVH48-1M5A8F1 160 aa7.98□□□□□ -1.13
NCK1-206ENST00000478862 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
NCK1-206ENST00000478862 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
NCK1-206ENST00000478862 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
NCK1-206ENST00000478862 TMPRSS4Q9NRS4 437 aa7.98□□□□□ -1.13
NCK1-206ENST00000478862 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 PTGIRP43119 386 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 OCSTAMPQ9BR26 566 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 GOPCQ9HD26 462 aa7.97□□□□□ -1.13
NCK1-206ENST00000478862 ZNF385CQ66K41 422 aaPredicted RBP7.96□□□□□ -1.14
NCK1-206ENST00000478862 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
NCK1-206ENST00000478862 ENAMQ9NRM1 1142 aa7.96□□□□□ -1.14
NCK1-206ENST00000478862 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
NCK1-206ENST00000478862 SCARF2Q96GP6 870 aaPredicted RBP7.95□□□□□ -1.14
NCK1-206ENST00000478862 GMCL1Q96IK5 515 aa7.95□□□□□ -1.14
NCK1-206ENST00000478862 PCMTD1Q96MG8 357 aaPredicted RBP7.95□□□□□ -1.14
NCK1-206ENST00000478862 ESF1Q9H501 851 aaKnown RBP7.95□□□□□ -1.14
NCK1-206ENST00000478862 ESPNB1AK53 854 aa7.94□□□□□ -1.14
NCK1-206ENST00000478862 RFC5P40937 340 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms