RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
TCTN3-205ENST00000478245 GCP02774 474 aa13.9□□□□□ -0.18
TCTN3-205ENST00000478245 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
TCTN3-205ENST00000478245 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
TCTN3-205ENST00000478245 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
TCTN3-205ENST00000478245 USP19O94966 1318 aa13.9□□□□□ -0.19
TCTN3-205ENST00000478245 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
TCTN3-205ENST00000478245 CDK19Q9BWU1 502 aa13.89□□□□□ -0.19
TCTN3-205ENST00000478245 ARHGEF28Q8N1W1 1705 aaKnown RBP13.89□□□□□ -0.19
TCTN3-205ENST00000478245 TOPAZ1Q8N9V7 1692 aa13.88□□□□□ -0.19
TCTN3-205ENST00000478245 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
TCTN3-205ENST00000478245 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
TCTN3-205ENST00000478245 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
TCTN3-205ENST00000478245 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
TCTN3-205ENST00000478245 MAP3K5Q99683 1374 aa13.87□□□□□ -0.19
TCTN3-205ENST00000478245 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
TCTN3-205ENST00000478245 GOLGB1Q14789 3259 aaKnown RBP13.87□□□□□ -0.19
TCTN3-205ENST00000478245 BCL9O00512 1426 aa13.85□□□□□ -0.19
TCTN3-205ENST00000478245 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
TCTN3-205ENST00000478245 AATKQ6ZMQ8 1374 aa13.84□□□□□ -0.19
TCTN3-205ENST00000478245 RGPD5Q99666 1765 aa13.84□□□□□ -0.19
TCTN3-205ENST00000478245 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
TCTN3-205ENST00000478245 SHANK3Q9BYB0 1731 aa13.84□□□□□ -0.19
TCTN3-205ENST00000478245 EXOC5O00471 708 aa13.83□□□□□ -0.2
TCTN3-205ENST00000478245 WDR17Q8IZU2 1322 aa13.83□□□□□ -0.2
TCTN3-205ENST00000478245 POLD1P28340 1107 aa13.82□□□□□ -0.2
TCTN3-205ENST00000478245 NLRP6P59044 892 aa13.82□□□□□ -0.2
TCTN3-205ENST00000478245 COL18A1P39060 1754 aa13.81□□□□□ -0.2
TCTN3-205ENST00000478245 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
TCTN3-205ENST00000478245 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
TCTN3-205ENST00000478245 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
TCTN3-205ENST00000478245 BTAF1O14981 1849 aa13.79□□□□□ -0.2
TCTN3-205ENST00000478245 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
TCTN3-205ENST00000478245 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
TCTN3-205ENST00000478245 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
TCTN3-205ENST00000478245 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
TCTN3-205ENST00000478245 BRD4O60885 1362 aaPredicted RBP13.79□□□□□ -0.2
TCTN3-205ENST00000478245 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
TCTN3-205ENST00000478245 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
TCTN3-205ENST00000478245 SLC16A10Q8TF71 515 aa13.78□□□□□ -0.2
TCTN3-205ENST00000478245 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
TCTN3-205ENST00000478245 SLIT3O75094 1523 aa13.78□□□□□ -0.2
TCTN3-205ENST00000478245 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
TCTN3-205ENST00000478245 QSER1Q2KHR3 1735 aa13.76□□□□□ -0.21
TCTN3-205ENST00000478245 HSPA6P17066 643 aa13.76□□□□□ -0.21
TCTN3-205ENST00000478245 NLGN2Q8NFZ4 835 aa13.76□□□□□ -0.21
TCTN3-205ENST00000478245 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
TCTN3-205ENST00000478245 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
TCTN3-205ENST00000478245 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
TCTN3-205ENST00000478245 USP6P35125 1406 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 SOX12O15370 315 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 CABP2Q9NPB3 220 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
TCTN3-205ENST00000478245 YBX3P16989 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
TCTN3-205ENST00000478245 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
TCTN3-205ENST00000478245 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
TCTN3-205ENST00000478245 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
TCTN3-205ENST00000478245 TUBGCP6Q96RT7 1819 aa13.73□□□□□ -0.21
TCTN3-205ENST00000478245 QRICH2Q9H0J4 1663 aa13.72□□□□□ -0.21
TCTN3-205ENST00000478245 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
TCTN3-205ENST00000478245 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
TCTN3-205ENST00000478245 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
TCTN3-205ENST00000478245 ABCC6O95255 1503 aa13.71□□□□□ -0.21
TCTN3-205ENST00000478245 ZNF526Q8TF50 670 aaPredicted RBP13.71□□□□□ -0.21
TCTN3-205ENST00000478245 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
TCTN3-205ENST00000478245 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
TCTN3-205ENST00000478245 MSH5O43196 834 aa13.69□□□□□ -0.22
TCTN3-205ENST00000478245 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
TCTN3-205ENST00000478245 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
TCTN3-205ENST00000478245 KIAA1210Q9ULL0 1709 aa13.69□□□□□ -0.22
TCTN3-205ENST00000478245 IL2RBP14784 551 aa13.68□□□□□ -0.22
TCTN3-205ENST00000478245 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
TCTN3-205ENST00000478245 KCNQ4P56696 695 aa13.66□□□□□ -0.22
TCTN3-205ENST00000478245 TTC21BQ7Z4L5 1316 aa13.65□□□□□ -0.22
TCTN3-205ENST00000478245 NBPF1Q3BBV0 1214 aa13.64□□□□□ -0.23
TCTN3-205ENST00000478245 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
TCTN3-205ENST00000478245 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
TCTN3-205ENST00000478245 NFAT5O94916 1531 aa13.64□□□□□ -0.23
TCTN3-205ENST00000478245 LTN1O94822 1766 aa13.63□□□□□ -0.23
TCTN3-205ENST00000478245 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
TCTN3-205ENST00000478245 ERBB3P21860 1342 aa13.63□□□□□ -0.23
TCTN3-205ENST00000478245 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
TCTN3-205ENST00000478245 LY75O60449 1722 aa13.62□□□□□ -0.23
TCTN3-205ENST00000478245 ADCY9O60503 1353 aa13.62□□□□□ -0.23
TCTN3-205ENST00000478245 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
TCTN3-205ENST00000478245 APLP1P51693 650 aa13.62□□□□□ -0.23
TCTN3-205ENST00000478245 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
TCTN3-205ENST00000478245 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
TCTN3-205ENST00000478245 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
TCTN3-205ENST00000478245 CAPN15O75808 1086 aa13.6□□□□□ -0.23
TCTN3-205ENST00000478245 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
TCTN3-205ENST00000478245 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
TCTN3-205ENST00000478245 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
TCTN3-205ENST00000478245 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
TCTN3-205ENST00000478245 ANKRD24Q8TF21 1146 aa13.59□□□□□ -0.23
TCTN3-205ENST00000478245 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.23
TCTN3-205ENST00000478245 KIF3CO14782 793 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms