RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
RPS27A-208ENST00000478196 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
RPS27A-208ENST00000478196 KRT76Q01546 638 aa8.84□□□□□ -0.99
RPS27A-208ENST00000478196 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
RPS27A-208ENST00000478196 GDF11O95390 407 aa8.83□□□□□ -1
RPS27A-208ENST00000478196 RASSF7Q02833 373 aa8.83□□□□□ -1
RPS27A-208ENST00000478196 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
RPS27A-208ENST00000478196 ADAMTS8Q9UP79 889 aa8.83□□□□□ -1
RPS27A-208ENST00000478196 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
RPS27A-208ENST00000478196 Q6ZVU0 165 aa8.82□□□□□ -1
RPS27A-208ENST00000478196 CARD14Q9BXL6 1004 aa8.82□□□□□ -1
RPS27A-208ENST00000478196 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
RPS27A-208ENST00000478196 SPINT1O43278 529 aa8.81□□□□□ -1
RPS27A-208ENST00000478196 ERFEQ4G0M1 354 aa8.81□□□□□ -1
RPS27A-208ENST00000478196 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
RPS27A-208ENST00000478196 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
RPS27A-208ENST00000478196 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
RPS27A-208ENST00000478196 CBLBQ13191 982 aa8.79□□□□□ -1
RPS27A-208ENST00000478196 CDV3Q9UKY7 258 aaKnown RBP8.79□□□□□ -1
RPS27A-208ENST00000478196 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
RPS27A-208ENST00000478196 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
RPS27A-208ENST00000478196 SLC35F4A4IF30 521 aa8.77□□□□□ -1.01
RPS27A-208ENST00000478196 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
RPS27A-208ENST00000478196 PDE4DQ08499 809 aa8.77□□□□□ -1.01
RPS27A-208ENST00000478196 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
RPS27A-208ENST00000478196 SVOPQ8N4V2 548 aa8.77□□□□□ -1.01
RPS27A-208ENST00000478196 KCTD15Q96SI1 283 aaPredicted RBP8.77□□□□□ -1.01
RPS27A-208ENST00000478196 ARHGAP9Q9BRR9 750 aa8.77□□□□□ -1.01
RPS27A-208ENST00000478196 SLC10A4Q96EP9 437 aa8.76□□□□□ -1.01
RPS27A-208ENST00000478196 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
RPS27A-208ENST00000478196 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
RPS27A-208ENST00000478196 ITGA6P23229 1130 aa8.75□□□□□ -1.01
RPS27A-208ENST00000478196 RNFT1Q5M7Z0 435 aa8.75□□□□□ -1.01
RPS27A-208ENST00000478196 SV2AQ7L0J3 742 aa8.75□□□□□ -1.01
RPS27A-208ENST00000478196 VWA5B2Q8N398 1253 aa8.75□□□□□ -1.01
RPS27A-208ENST00000478196 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
RPS27A-208ENST00000478196 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
RPS27A-208ENST00000478196 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
RPS27A-208ENST00000478196 CDC14CA4D256 554 aa8.72□□□□□ -1.01
RPS27A-208ENST00000478196 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
RPS27A-208ENST00000478196 RELBQ01201 579 aa8.72□□□□□ -1.01
RPS27A-208ENST00000478196 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
RPS27A-208ENST00000478196 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
RPS27A-208ENST00000478196 ARHGEF15O94989 841 aa8.71□□□□□ -1.02
RPS27A-208ENST00000478196 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
RPS27A-208ENST00000478196 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
RPS27A-208ENST00000478196 INSM2Q96T92 566 aaPredicted RBP8.71□□□□□ -1.02
RPS27A-208ENST00000478196 POLR3EQ9NVU0 708 aa8.71□□□□□ -1.02
RPS27A-208ENST00000478196 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
RPS27A-208ENST00000478196 IGHA1P01876 353 aa8.7□□□□□ -1.02
RPS27A-208ENST00000478196 IRS1P35568 1242 aa8.7□□□□□ -1.02
RPS27A-208ENST00000478196 PTK2Q05397 1052 aa8.7□□□□□ -1.02
RPS27A-208ENST00000478196 INTS6LQ5JSJ4 861 aaKnown RBP8.7□□□□□ -1.02
RPS27A-208ENST00000478196 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
RPS27A-208ENST00000478196 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
RPS27A-208ENST00000478196 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
RPS27A-208ENST00000478196 GPSM3Q9Y4H4 160 aa8.69□□□□□ -1.02
RPS27A-208ENST00000478196 FOXK2Q01167 660 aa8.68□□□□□ -1.02
RPS27A-208ENST00000478196 RNF217Q8TC41 542 aa8.68□□□□□ -1.02
RPS27A-208ENST00000478196 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
RPS27A-208ENST00000478196 NBPF20Q3BBV1 942 aa8.67□□□□□ -1.02
RPS27A-208ENST00000478196 GPAT2Q6NUI2 795 aa8.67□□□□□ -1.02
RPS27A-208ENST00000478196 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
RPS27A-208ENST00000478196 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
RPS27A-208ENST00000478196 ADAMTS2O95450 1211 aa8.66□□□□□ -1.02
RPS27A-208ENST00000478196 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
RPS27A-208ENST00000478196 NR6A1Q15406 480 aa8.66□□□□□ -1.02
RPS27A-208ENST00000478196 MAP3K10Q02779 954 aa8.65□□□□□ -1.02
RPS27A-208ENST00000478196 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
RPS27A-208ENST00000478196 ADH1AP07327 375 aa8.64□□□□□ -1.03
RPS27A-208ENST00000478196 OCSTAMPQ9BR26 566 aa8.64□□□□□ -1.03
RPS27A-208ENST00000478196 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
RPS27A-208ENST00000478196 PTGIRP43119 386 aa8.63□□□□□ -1.03
RPS27A-208ENST00000478196 LYPD4Q6UWN0 246 aa8.63□□□□□ -1.03
RPS27A-208ENST00000478196 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
RPS27A-208ENST00000478196 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
RPS27A-208ENST00000478196 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
RPS27A-208ENST00000478196 TMPRSS4Q9NRS4 437 aa8.63□□□□□ -1.03
RPS27A-208ENST00000478196 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
RPS27A-208ENST00000478196 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
RPS27A-208ENST00000478196 LYSMD3Q7Z3D4 306 aa8.62□□□□□ -1.03
RPS27A-208ENST00000478196 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
RPS27A-208ENST00000478196 LILRA1O75019 489 aa8.61□□□□□ -1.03
RPS27A-208ENST00000478196 ERVH48-1M5A8F1 160 aa8.6□□□□□ -1.03
RPS27A-208ENST00000478196 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
RPS27A-208ENST00000478196 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
RPS27A-208ENST00000478196 RAB15P59190 212 aa8.6□□□□□ -1.03
RPS27A-208ENST00000478196 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
RPS27A-208ENST00000478196 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
RPS27A-208ENST00000478196 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
RPS27A-208ENST00000478196 CCDC180Q9P1Z9 1646 aa8.59□□□□□ -1.03
RPS27A-208ENST00000478196 GAS6Q14393 721 aa8.59□□□□□ -1.03
RPS27A-208ENST00000478196 KDF1Q8NAX2 398 aaPredicted RBP8.59□□□□□ -1.03
RPS27A-208ENST00000478196 FOXR1Q6PIV2 292 aa8.58□□□□□ -1.04
RPS27A-208ENST00000478196 CUEDC1Q9NWM3 386 aaPredicted RBP8.58□□□□□ -1.04
RPS27A-208ENST00000478196 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
RPS27A-208ENST00000478196 ESPNB1AK53 854 aa8.57□□□□□ -1.04
RPS27A-208ENST00000478196 AP1G2O75843 785 aa8.57□□□□□ -1.04
RPS27A-208ENST00000478196 RNF144AP50876 292 aaPredicted RBP8.57□□□□□ -1.04
RPS27A-208ENST00000478196 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms