RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TCP11L2Q8N4U5 519 aa21.8■■□□□ 1.08
COMMD6-209ENST00000477377 FAM182BQ5T319 152 aa21.79■■□□□ 1.08
COMMD6-209ENST00000477377 CRB1P82279 1406 aa21.79■■□□□ 1.08
COMMD6-209ENST00000477377 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
COMMD6-209ENST00000477377 A0A0G2JS52 829 aa21.78■■□□□ 1.08
COMMD6-209ENST00000477377 MYT1Q01538 1121 aa21.78■■□□□ 1.08
COMMD6-209ENST00000477377 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
COMMD6-209ENST00000477377 BLMP54132 1417 aaPredicted RBP21.78■■□□□ 1.08
COMMD6-209ENST00000477377 CARD14Q9BXL6 1004 aa21.77■■□□□ 1.08
COMMD6-209ENST00000477377 WDR17Q8IZU2 1322 aa21.77■■□□□ 1.07
COMMD6-209ENST00000477377 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
COMMD6-209ENST00000477377 CDCA8Q53HL2 280 aa21.76■■□□□ 1.07
COMMD6-209ENST00000477377 MYOM1P52179 1685 aa21.75■■□□□ 1.07
COMMD6-209ENST00000477377 FYB1O15117 783 aa21.75■■□□□ 1.07
COMMD6-209ENST00000477377 ABCC6O95255 1503 aa21.75■■□□□ 1.07
COMMD6-209ENST00000477377 FBLN1P23142 703 aa21.74■■□□□ 1.07
COMMD6-209ENST00000477377 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
COMMD6-209ENST00000477377 DEFB132Q7Z7B7 95 aa21.73■■□□□ 1.07
COMMD6-209ENST00000477377 TOM1L2Q6ZVM7 507 aa21.72■■□□□ 1.07
COMMD6-209ENST00000477377 CARD10Q9BWT7 1032 aa21.71■■□□□ 1.07
COMMD6-209ENST00000477377 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
COMMD6-209ENST00000477377 LTN1O94822 1766 aa21.71■■□□□ 1.07
COMMD6-209ENST00000477377 C11orf95C9JLR9 678 aaPredicted RBP21.7■■□□□ 1.06
COMMD6-209ENST00000477377 COG3Q96JB2 828 aa21.69■■□□□ 1.06
COMMD6-209ENST00000477377 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
COMMD6-209ENST00000477377 ERBB3P21860 1342 aa21.69■■□□□ 1.06
COMMD6-209ENST00000477377 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
COMMD6-209ENST00000477377 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
COMMD6-209ENST00000477377 IP6K1Q92551 441 aa21.67■■□□□ 1.06
COMMD6-209ENST00000477377 FAM196AQ6ZSG2 479 aa21.66■■□□□ 1.06
COMMD6-209ENST00000477377 WNK3Q9BYP7 1800 aa21.66■■□□□ 1.06
COMMD6-209ENST00000477377 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
COMMD6-209ENST00000477377 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
COMMD6-209ENST00000477377 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
COMMD6-209ENST00000477377 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.06
COMMD6-209ENST00000477377 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.05
COMMD6-209ENST00000477377 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
COMMD6-209ENST00000477377 HOXC9P31274 260 aa21.63■■□□□ 1.05
COMMD6-209ENST00000477377 TNS1Q9HBL0 1735 aaKnown RBP21.63■■□□□ 1.05
COMMD6-209ENST00000477377 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
COMMD6-209ENST00000477377 TRIM37O94972 964 aa21.62■■□□□ 1.05
COMMD6-209ENST00000477377 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
COMMD6-209ENST00000477377 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
COMMD6-209ENST00000477377 RRS1Q15050 365 aaKnown RBP21.61■■□□□ 1.05
COMMD6-209ENST00000477377 DDB1Q16531 1140 aa21.61■■□□□ 1.05
COMMD6-209ENST00000477377 MARCH10Q8NA82 808 aaPredicted RBP21.61■■□□□ 1.05
COMMD6-209ENST00000477377 CDCA7Q9BWT1 371 aaPredicted RBP21.61■■□□□ 1.05
COMMD6-209ENST00000477377 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
COMMD6-209ENST00000477377 EN1Q05925 392 aaPredicted RBP21.6■■□□□ 1.05
COMMD6-209ENST00000477377 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
COMMD6-209ENST00000477377 BAG6P46379 1132 aa21.58■■□□□ 1.05
COMMD6-209ENST00000477377 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
COMMD6-209ENST00000477377 CAMKK2Q96RR4 588 aa21.57■■□□□ 1.04
COMMD6-209ENST00000477377 BCL9O00512 1426 aa21.56■■□□□ 1.04
COMMD6-209ENST00000477377 AMPHP49418 695 aa21.56■■□□□ 1.04
COMMD6-209ENST00000477377 PTF1AQ7RTS3 328 aa21.56■■□□□ 1.04
COMMD6-209ENST00000477377 LTV1Q96GA3 475 aaPredicted RBP21.56■■□□□ 1.04
COMMD6-209ENST00000477377 PANK3Q9H999 370 aa21.56■■□□□ 1.04
COMMD6-209ENST00000477377 OVOS2A0A0G2JMS6 1433 aa21.55■■□□□ 1.04
COMMD6-209ENST00000477377 EXOC5O00471 708 aa21.55■■□□□ 1.04
COMMD6-209ENST00000477377 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
COMMD6-209ENST00000477377 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
COMMD6-209ENST00000477377 IL2RBP14784 551 aa21.54■■□□□ 1.04
COMMD6-209ENST00000477377 SBF2Q86WG5 1849 aa21.54■■□□□ 1.04
COMMD6-209ENST00000477377 APBA3O96018 575 aa21.53■■□□□ 1.04
COMMD6-209ENST00000477377 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
COMMD6-209ENST00000477377 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
COMMD6-209ENST00000477377 TNS2Q63HR2 1409 aa21.53■■□□□ 1.04
COMMD6-209ENST00000477377 FAM208AQ9UK61 1670 aaKnown RBP21.53■■□□□ 1.04
COMMD6-209ENST00000477377 CGNL1Q0VF96 1302 aa21.53■■□□□ 1.04
COMMD6-209ENST00000477377 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.04
COMMD6-209ENST00000477377 NBPF4Q96M43 638 aa21.52■■□□□ 1.04
COMMD6-209ENST00000477377 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.03
COMMD6-209ENST00000477377 SRCAPQ6ZRS2 3230 aa21.51■■□□□ 1.03
COMMD6-209ENST00000477377 EMILIN1Q9Y6C2 1016 aa21.51■■□□□ 1.03
COMMD6-209ENST00000477377 INSRP06213 1382 aa21.5■■□□□ 1.03
COMMD6-209ENST00000477377 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
COMMD6-209ENST00000477377 FLT4P35916 1363 aa21.48■■□□□ 1.03
COMMD6-209ENST00000477377 POLKQ9UBT6 870 aa21.48■■□□□ 1.03
COMMD6-209ENST00000477377 BCL11BQ9C0K0 894 aaPredicted RBP21.47■■□□□ 1.03
COMMD6-209ENST00000477377 ANKRD26Q9UPS8 1709 aa21.46■■□□□ 1.03
COMMD6-209ENST00000477377 MEGF6O75095 1541 aa21.45■■□□□ 1.02
COMMD6-209ENST00000477377 KCNQ2O43526 872 aa21.45■■□□□ 1.02
COMMD6-209ENST00000477377 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
COMMD6-209ENST00000477377 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
COMMD6-209ENST00000477377 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.02
COMMD6-209ENST00000477377 PARD3Q8TEW0 1356 aa21.45■■□□□ 1.02
COMMD6-209ENST00000477377 RREB1Q92766 1687 aa21.44■■□□□ 1.02
COMMD6-209ENST00000477377 PLSCR1O15162 318 aa21.44■■□□□ 1.02
COMMD6-209ENST00000477377 PROM2Q8N271 834 aa21.44■■□□□ 1.02
COMMD6-209ENST00000477377 PER1O15534 1290 aaPredicted RBP21.43■■□□□ 1.02
COMMD6-209ENST00000477377 NCAPD2Q15021 1401 aa21.42■■□□□ 1.02
COMMD6-209ENST00000477377 AMER1Q5JTC6 1135 aaPredicted RBP21.42■■□□□ 1.02
COMMD6-209ENST00000477377 SHANK3Q9BYB0 1731 aa21.42■■□□□ 1.02
COMMD6-209ENST00000477377 PSDA5PKW4 1024 aaPredicted RBP21.41■■□□□ 1.02
COMMD6-209ENST00000477377 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
COMMD6-209ENST00000477377 NSD2O96028 1365 aa21.4■■□□□ 1.02
COMMD6-209ENST00000477377 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
COMMD6-209ENST00000477377 PPM1GO15355 546 aaPredicted RBP21.39■■□□□ 1.01
COMMD6-209ENST00000477377 ACSBG1Q96GR2 724 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms