RNA–Protein interactions for RNA: ENST00000477369.5

AFF4-207, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-207ENST00000477369 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
AFF4-207ENST00000477369 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
AFF4-207ENST00000477369 USP17L5A8MUK1 530 aa12.19□□□□□ -0.46
AFF4-207ENST00000477369 FAM174AQ8TBP5 190 aa12.19□□□□□ -0.46
AFF4-207ENST00000477369 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
AFF4-207ENST00000477369 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
AFF4-207ENST00000477369 ATG7O95352 703 aa12.17□□□□□ -0.46
AFF4-207ENST00000477369 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
AFF4-207ENST00000477369 SKOR1P84550 965 aa12.16□□□□□ -0.46
AFF4-207ENST00000477369 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
AFF4-207ENST00000477369 ESPNB1AK53 854 aa12.15□□□□□ -0.46
AFF4-207ENST00000477369 KANK4Q5T7N3 995 aaPredicted RBP12.15□□□□□ -0.46
AFF4-207ENST00000477369 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
AFF4-207ENST00000477369 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
AFF4-207ENST00000477369 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
AFF4-207ENST00000477369 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
AFF4-207ENST00000477369 MPNDQ8N594 471 aa12.13□□□□□ -0.47
AFF4-207ENST00000477369 ATP5J2-PTCD1G3V325 749 aa12.12□□□□□ -0.47
AFF4-207ENST00000477369 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
AFF4-207ENST00000477369 EML3Q32P44 896 aa12.12□□□□□ -0.47
AFF4-207ENST00000477369 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
AFF4-207ENST00000477369 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
AFF4-207ENST00000477369 NCOA4Q13772 614 aa12.11□□□□□ -0.47
AFF4-207ENST00000477369 DOLKQ9UPQ8 538 aa12.11□□□□□ -0.47
AFF4-207ENST00000477369 SLC19A1P41440 591 aa12.1□□□□□ -0.47
AFF4-207ENST00000477369 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
AFF4-207ENST00000477369 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
AFF4-207ENST00000477369 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
AFF4-207ENST00000477369 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
AFF4-207ENST00000477369 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
AFF4-207ENST00000477369 FAM196BA6NMK8 535 aa12.09□□□□□ -0.47
AFF4-207ENST00000477369 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
AFF4-207ENST00000477369 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
AFF4-207ENST00000477369 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
AFF4-207ENST00000477369 SIRT1Q96EB6 747 aa12.09□□□□□ -0.47
AFF4-207ENST00000477369 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
AFF4-207ENST00000477369 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
AFF4-207ENST00000477369 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
AFF4-207ENST00000477369 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
AFF4-207ENST00000477369 WNT7AO00755 349 aa12.07□□□□□ -0.48
AFF4-207ENST00000477369 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
AFF4-207ENST00000477369 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
AFF4-207ENST00000477369 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
AFF4-207ENST00000477369 TSGA10IPQ3SY00 556 aa12.06□□□□□ -0.48
AFF4-207ENST00000477369 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
AFF4-207ENST00000477369 A0A0G2JS52 829 aa12.05□□□□□ -0.48
AFF4-207ENST00000477369 USP4Q13107 963 aa12.05□□□□□ -0.48
AFF4-207ENST00000477369 SIAH2O43255 324 aa12.04□□□□□ -0.48
AFF4-207ENST00000477369 RASA1P20936 1047 aa12.04□□□□□ -0.48
AFF4-207ENST00000477369 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
AFF4-207ENST00000477369 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L12C9JPN9 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L21D6R901 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
AFF4-207ENST00000477369 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 PTK7Q13308 1070 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
AFF4-207ENST00000477369 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
AFF4-207ENST00000477369 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
AFF4-207ENST00000477369 OGFOD1Q8N543 542 aa12.02□□□□□ -0.49
AFF4-207ENST00000477369 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.49
AFF4-207ENST00000477369 GRM5P41594 1212 aa12.01□□□□□ -0.49
AFF4-207ENST00000477369 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
AFF4-207ENST00000477369 CRTC2Q53ET0 693 aaPredicted RBP12.01□□□□□ -0.49
AFF4-207ENST00000477369 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
AFF4-207ENST00000477369 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
AFF4-207ENST00000477369 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
AFF4-207ENST00000477369 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
AFF4-207ENST00000477369 ADH1CP00326 375 aa12□□□□□ -0.49
AFF4-207ENST00000477369 NR5A1Q13285 461 aa12□□□□□ -0.49
AFF4-207ENST00000477369 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
AFF4-207ENST00000477369 DNAAF2Q9NVR5 837 aaKnown RBP12□□□□□ -0.49
AFF4-207ENST00000477369 ZMIZ1Q9ULJ6 1067 aa12□□□□□ -0.49
AFF4-207ENST00000477369 ERVH48-1M5A8F1 160 aa11.99□□□□□ -0.49
AFF4-207ENST00000477369 MYCP01106 439 aaPredicted RBP11.99□□□□□ -0.49
AFF4-207ENST00000477369 CLDN10P78369 228 aa11.99□□□□□ -0.49
AFF4-207ENST00000477369 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
AFF4-207ENST00000477369 FSHRP23945 695 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 GTF2IP78347 998 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 SIX5Q8N196 739 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 FAM200AQ8TCP9 573 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
AFF4-207ENST00000477369 BRD1O95696 1058 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms