RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
CDKN1B-204ENST00000477087 SCARF1Q14162 830 aa10.33□□□□□ -0.76
CDKN1B-204ENST00000477087 TRIM46Q7Z4K8 759 aa10.33□□□□□ -0.76
CDKN1B-204ENST00000477087 CCDC116Q8IYX3 515 aa10.33□□□□□ -0.76
CDKN1B-204ENST00000477087 ADAM32Q8TC27 787 aa10.33□□□□□ -0.76
CDKN1B-204ENST00000477087 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
CDKN1B-204ENST00000477087 APBB1O00213 710 aa10.32□□□□□ -0.76
CDKN1B-204ENST00000477087 ITPKCQ96DU7 683 aa10.32□□□□□ -0.76
CDKN1B-204ENST00000477087 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 DZIP3Q86Y13 1208 aaKnown RBP10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 EMILIN1Q9Y6C2 1016 aa10.31□□□□□ -0.76
CDKN1B-204ENST00000477087 GJD4Q96KN9 370 aaPredicted RBP10.3□□□□□ -0.76
CDKN1B-204ENST00000477087 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
CDKN1B-204ENST00000477087 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
CDKN1B-204ENST00000477087 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
CDKN1B-204ENST00000477087 UPP2O95045 317 aa10.28□□□□□ -0.76
CDKN1B-204ENST00000477087 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
CDKN1B-204ENST00000477087 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
CDKN1B-204ENST00000477087 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
CDKN1B-204ENST00000477087 ZBBXA8MT70 800 aa10.27□□□□□ -0.77
CDKN1B-204ENST00000477087 SOCS7O14512 581 aa10.27□□□□□ -0.77
CDKN1B-204ENST00000477087 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
CDKN1B-204ENST00000477087 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
CDKN1B-204ENST00000477087 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
CDKN1B-204ENST00000477087 C6orf118Q5T5N4 469 aa10.25□□□□□ -0.77
CDKN1B-204ENST00000477087 MTMR14Q8NCE2 650 aa10.25□□□□□ -0.77
CDKN1B-204ENST00000477087 SNRKQ9NRH2 765 aa10.25□□□□□ -0.77
CDKN1B-204ENST00000477087 RAB15P59190 212 aa10.24□□□□□ -0.77
CDKN1B-204ENST00000477087 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
CDKN1B-204ENST00000477087 PRM3Q9NNZ6 103 aa10.24□□□□□ -0.77
CDKN1B-204ENST00000477087 PCDHB9Q9Y5E1 797 aa10.24□□□□□ -0.77
CDKN1B-204ENST00000477087 BMP2P12643 396 aa10.23□□□□□ -0.77
CDKN1B-204ENST00000477087 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
CDKN1B-204ENST00000477087 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
CDKN1B-204ENST00000477087 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
CDKN1B-204ENST00000477087 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
CDKN1B-204ENST00000477087 TSEN34Q9BSV6 310 aaKnown RBP10.21□□□□□ -0.77
CDKN1B-204ENST00000477087 NR1H3Q13133 447 aa10.2□□□□□ -0.78
CDKN1B-204ENST00000477087 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
CDKN1B-204ENST00000477087 TRIM52Q96A61 297 aa10.2□□□□□ -0.78
CDKN1B-204ENST00000477087 WFS1O76024 890 aa10.19□□□□□ -0.78
CDKN1B-204ENST00000477087 CBLBQ13191 982 aa10.19□□□□□ -0.78
CDKN1B-204ENST00000477087 TERTO14746 1132 aaKnown RBP10.18□□□□□ -0.78
CDKN1B-204ENST00000477087 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
CDKN1B-204ENST00000477087 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
CDKN1B-204ENST00000477087 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
CDKN1B-204ENST00000477087 ESPNB1AK53 854 aa10.17□□□□□ -0.78
CDKN1B-204ENST00000477087 MAN1A2O60476 641 aa10.17□□□□□ -0.78
CDKN1B-204ENST00000477087 Q6ZVU0 165 aa10.17□□□□□ -0.78
CDKN1B-204ENST00000477087 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
CDKN1B-204ENST00000477087 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
CDKN1B-204ENST00000477087 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
CDKN1B-204ENST00000477087 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
CDKN1B-204ENST00000477087 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
CDKN1B-204ENST00000477087 ZNF784Q8NCA9 323 aaPredicted RBP10.15□□□□□ -0.78
CDKN1B-204ENST00000477087 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
CDKN1B-204ENST00000477087 SOBPA7XYQ1 873 aa10.14□□□□□ -0.79
CDKN1B-204ENST00000477087 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
CDKN1B-204ENST00000477087 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
CDKN1B-204ENST00000477087 GPR37L1O60883 481 aa10.13□□□□□ -0.79
CDKN1B-204ENST00000477087 CCDC125Q86Z20 511 aa10.13□□□□□ -0.79
CDKN1B-204ENST00000477087 SOS2Q07890 1332 aaPredicted RBP10.12□□□□□ -0.79
CDKN1B-204ENST00000477087 RELBQ01201 579 aa10.12□□□□□ -0.79
CDKN1B-204ENST00000477087 NPAS3Q8IXF0 933 aa10.12□□□□□ -0.79
CDKN1B-204ENST00000477087 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
CDKN1B-204ENST00000477087 TTLL8A6PVC2 850 aa10.11□□□□□ -0.79
CDKN1B-204ENST00000477087 SPINT1O43278 529 aa10.11□□□□□ -0.79
CDKN1B-204ENST00000477087 ADH1AP07327 375 aa10.11□□□□□ -0.79
CDKN1B-204ENST00000477087 CYLDQ9NQC7 956 aa10.11□□□□□ -0.79
CDKN1B-204ENST00000477087 VEGFBP49765 207 aa10.09□□□□□ -0.79
CDKN1B-204ENST00000477087 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.09□□□□□ -0.79
CDKN1B-204ENST00000477087 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
CDKN1B-204ENST00000477087 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
CDKN1B-204ENST00000477087 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
CDKN1B-204ENST00000477087 LILRA1O75019 489 aa10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 ABL2P42684 1182 aa10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 EIF4G2P78344 907 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 MCM6Q14566 821 aa10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
CDKN1B-204ENST00000477087 FIGNL2A6NMB9 653 aa10.07□□□□□ -0.8
CDKN1B-204ENST00000477087 ADD1P35611 737 aaKnown RBP10.07□□□□□ -0.8
CDKN1B-204ENST00000477087 IRF7Q92985 503 aa10.07□□□□□ -0.8
CDKN1B-204ENST00000477087 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
CDKN1B-204ENST00000477087 BICRAQ9NZM4 1560 aa10.06□□□□□ -0.8
CDKN1B-204ENST00000477087 PTGIRP43119 386 aa10.06□□□□□ -0.8
CDKN1B-204ENST00000477087 CC2D2BQ6DHV5 1058 aa10.06□□□□□ -0.8
CDKN1B-204ENST00000477087 INSM2Q96T92 566 aaPredicted RBP10.06□□□□□ -0.8
CDKN1B-204ENST00000477087 PCDHB11Q9Y5F2 797 aa10.06□□□□□ -0.8
CDKN1B-204ENST00000477087 H3BM21 787 aa10.05□□□□□ -0.8
CDKN1B-204ENST00000477087 IRF5Q13568 498 aa10.05□□□□□ -0.8
CDKN1B-204ENST00000477087 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
CDKN1B-204ENST00000477087 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
CDKN1B-204ENST00000477087 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
CDKN1B-204ENST00000477087 VAC14Q08AM6 782 aa10.04□□□□□ -0.8
CDKN1B-204ENST00000477087 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms