RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ABTB2Q8N961 1025 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 ARXQ96QS3 562 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 GPR162Q16538 588 aa22.85■■□□□ 1.25
SMG5-204ENST00000476954 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
SMG5-204ENST00000476954 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
SMG5-204ENST00000476954 GCP02774 474 aa22.84■■□□□ 1.25
SMG5-204ENST00000476954 MAP3K5Q99683 1374 aa22.81■■□□□ 1.24
SMG5-204ENST00000476954 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
SMG5-204ENST00000476954 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
SMG5-204ENST00000476954 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
SMG5-204ENST00000476954 BCL9O00512 1426 aa22.78■■□□□ 1.24
SMG5-204ENST00000476954 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
SMG5-204ENST00000476954 COL18A1P39060 1754 aa22.78■■□□□ 1.24
SMG5-204ENST00000476954 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
SMG5-204ENST00000476954 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
SMG5-204ENST00000476954 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
SMG5-204ENST00000476954 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
SMG5-204ENST00000476954 CCDC61Q9Y6R9 512 aa22.75■■□□□ 1.23
SMG5-204ENST00000476954 RGPD5Q99666 1765 aa22.75■■□□□ 1.23
SMG5-204ENST00000476954 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
SMG5-204ENST00000476954 ZNF827Q17R98 1081 aa22.73■■□□□ 1.23
SMG5-204ENST00000476954 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
SMG5-204ENST00000476954 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
SMG5-204ENST00000476954 NLGN2Q8NFZ4 835 aa22.71■■□□□ 1.23
SMG5-204ENST00000476954 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
SMG5-204ENST00000476954 SLIT3O75094 1523 aa22.7■■□□□ 1.22
SMG5-204ENST00000476954 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
SMG5-204ENST00000476954 ACSBG1Q96GR2 724 aa22.69■■□□□ 1.22
SMG5-204ENST00000476954 BTAF1O14981 1849 aa22.67■■□□□ 1.22
SMG5-204ENST00000476954 NLRP6P59044 892 aa22.67■■□□□ 1.22
SMG5-204ENST00000476954 CDCA7Q9BWT1 371 aaPredicted RBP22.67■■□□□ 1.22
SMG5-204ENST00000476954 COL24A1Q17RW2 1714 aa22.67■■□□□ 1.22
SMG5-204ENST00000476954 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.22
SMG5-204ENST00000476954 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
SMG5-204ENST00000476954 ATP10DQ9P241 1426 aa22.65■■□□□ 1.22
SMG5-204ENST00000476954 EXOC5O00471 708 aa22.65■■□□□ 1.22
SMG5-204ENST00000476954 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
SMG5-204ENST00000476954 LRRC4BQ9NT99 713 aa22.64■■□□□ 1.21
SMG5-204ENST00000476954 GOLGB1Q14789 3259 aaKnown RBP22.63■■□□□ 1.21
SMG5-204ENST00000476954 PIK3C2AO00443 1686 aa22.63■■□□□ 1.21
SMG5-204ENST00000476954 CARD10Q9BWT7 1032 aa22.63■■□□□ 1.21
SMG5-204ENST00000476954 TUBGCP6Q96RT7 1819 aa22.63■■□□□ 1.21
SMG5-204ENST00000476954 CPSF1Q10570 1443 aaKnown RBP22.62■■□□□ 1.21
SMG5-204ENST00000476954 CSB-PGBD3P0DP91 1061 aa22.61■■□□□ 1.21
SMG5-204ENST00000476954 HSPA6P17066 643 aa22.61■■□□□ 1.21
SMG5-204ENST00000476954 QSER1Q2KHR3 1735 aa22.61■■□□□ 1.21
SMG5-204ENST00000476954 TNS2Q63HR2 1409 aa22.61■■□□□ 1.21
SMG5-204ENST00000476954 POLD1P28340 1107 aa22.6■■□□□ 1.21
SMG5-204ENST00000476954 USP6P35125 1406 aa22.59■■□□□ 1.21
SMG5-204ENST00000476954 AKT1S1Q96B36 256 aa22.59■■□□□ 1.21
SMG5-204ENST00000476954 CABP2Q9NPB3 220 aa22.59■■□□□ 1.21
SMG5-204ENST00000476954 PNPLA7Q6ZV29 1317 aa22.58■■□□□ 1.21
SMG5-204ENST00000476954 TRPM1Q7Z4N2 1603 aa22.58■■□□□ 1.21
SMG5-204ENST00000476954 SOX12O15370 315 aa22.58■■□□□ 1.21
SMG5-204ENST00000476954 SRPK2P78362 688 aaKnown RBP22.58■■□□□ 1.21
SMG5-204ENST00000476954 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
SMG5-204ENST00000476954 BRD4O60885 1362 aaPredicted RBP22.57■■□□□ 1.2
SMG5-204ENST00000476954 ZNF526Q8TF50 670 aaPredicted RBP22.56■■□□□ 1.2
SMG5-204ENST00000476954 SLC16A10Q8TF71 515 aa22.56■■□□□ 1.2
SMG5-204ENST00000476954 GRIN3BO60391 1043 aa22.55■■□□□ 1.2
SMG5-204ENST00000476954 GPBP1L1Q9HC44 474 aaPredicted RBP22.55■■□□□ 1.2
SMG5-204ENST00000476954 ABCC6O95255 1503 aa22.55■■□□□ 1.2
SMG5-204ENST00000476954 KCNQ4P56696 695 aa22.54■■□□□ 1.2
SMG5-204ENST00000476954 CABP1Q9NZU7 370 aa22.54■■□□□ 1.2
SMG5-204ENST00000476954 CCDC7Q96M83 1385 aa22.53■■□□□ 1.2
SMG5-204ENST00000476954 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
SMG5-204ENST00000476954 ADCY9O60503 1353 aa22.5■■□□□ 1.19
SMG5-204ENST00000476954 NFAT5O94916 1531 aa22.48■■□□□ 1.19
SMG5-204ENST00000476954 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
SMG5-204ENST00000476954 NBPF1Q3BBV0 1214 aa22.47■■□□□ 1.19
SMG5-204ENST00000476954 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
SMG5-204ENST00000476954 KCNH5Q8NCM2 988 aa22.45■■□□□ 1.18
SMG5-204ENST00000476954 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
SMG5-204ENST00000476954 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
SMG5-204ENST00000476954 NLRP2Q9NX02 1062 aa22.44■■□□□ 1.18
SMG5-204ENST00000476954 KIAA1210Q9ULL0 1709 aa22.44■■□□□ 1.18
SMG5-204ENST00000476954 MSL1Q68DK7 614 aa22.43■■□□□ 1.18
SMG5-204ENST00000476954 CENPJQ9HC77 1338 aaPredicted RBP22.42■■□□□ 1.18
SMG5-204ENST00000476954 IL2RBP14784 551 aa22.42■■□□□ 1.18
SMG5-204ENST00000476954 LY75O60449 1722 aa22.41■■□□□ 1.18
SMG5-204ENST00000476954 KIF3CO14782 793 aa22.4■■□□□ 1.18
SMG5-204ENST00000476954 MSH5O43196 834 aa22.4■■□□□ 1.18
SMG5-204ENST00000476954 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
SMG5-204ENST00000476954 ERBB3P21860 1342 aa22.39■■□□□ 1.18
SMG5-204ENST00000476954 CAPN15O75808 1086 aa22.39■■□□□ 1.17
SMG5-204ENST00000476954 WWC3Q9ULE0 1092 aa22.39■■□□□ 1.17
SMG5-204ENST00000476954 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
SMG5-204ENST00000476954 DNAJC5GQ8N7S2 189 aa22.38■■□□□ 1.17
SMG5-204ENST00000476954 LTN1O94822 1766 aa22.37■■□□□ 1.17
SMG5-204ENST00000476954 DOT1LQ8TEK3 1739 aa22.37■■□□□ 1.17
SMG5-204ENST00000476954 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
SMG5-204ENST00000476954 SYTL4Q96C24 671 aaPredicted RBP22.35■■□□□ 1.17
SMG5-204ENST00000476954 PRIM1P49642 420 aaKnown RBP22.34■■□□□ 1.17
SMG5-204ENST00000476954 APLP1P51693 650 aa22.34■■□□□ 1.17
SMG5-204ENST00000476954 COL13A1Q5TAT6 717 aaPredicted RBP22.34■■□□□ 1.17
SMG5-204ENST00000476954 NSD2O96028 1365 aa22.33■■□□□ 1.17
SMG5-204ENST00000476954 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
SMG5-204ENST00000476954 CD2APQ9Y5K6 639 aa22.32■■□□□ 1.16
SMG5-204ENST00000476954 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms