RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
HDAC6-219ENST00000476625 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-219ENST00000476625 AATKQ6ZMQ8 1374 aa17.38■□□□□ 0.37
HDAC6-219ENST00000476625 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
HDAC6-219ENST00000476625 KCNQ2O43526 872 aa17.37■□□□□ 0.37
HDAC6-219ENST00000476625 PPP1R1BQ9UD71 204 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-219ENST00000476625 DDB1Q16531 1140 aa17.36■□□□□ 0.37
HDAC6-219ENST00000476625 PROM2Q8N271 834 aa17.36■□□□□ 0.37
HDAC6-219ENST00000476625 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
HDAC6-219ENST00000476625 NFAT5O94916 1531 aa17.36■□□□□ 0.37
HDAC6-219ENST00000476625 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
HDAC6-219ENST00000476625 LTN1O94822 1766 aa17.35■□□□□ 0.37
HDAC6-219ENST00000476625 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
HDAC6-219ENST00000476625 WDR17Q8IZU2 1322 aa17.34■□□□□ 0.37
HDAC6-219ENST00000476625 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
HDAC6-219ENST00000476625 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
HDAC6-219ENST00000476625 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
HDAC6-219ENST00000476625 SIN3AQ96ST3 1273 aa17.32■□□□□ 0.36
HDAC6-219ENST00000476625 PLSCR1O15162 318 aa17.31■□□□□ 0.36
HDAC6-219ENST00000476625 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
HDAC6-219ENST00000476625 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-219ENST00000476625 BTAF1O14981 1849 aa17.31■□□□□ 0.36
HDAC6-219ENST00000476625 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
HDAC6-219ENST00000476625 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-219ENST00000476625 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-219ENST00000476625 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
HDAC6-219ENST00000476625 CSB-PGBD3P0DP91 1061 aa17.29■□□□□ 0.36
HDAC6-219ENST00000476625 PTGER2P43116 358 aa17.28■□□□□ 0.36
HDAC6-219ENST00000476625 ACSBG1Q96GR2 724 aa17.28■□□□□ 0.36
HDAC6-219ENST00000476625 USP54Q70EL1 1684 aa17.28■□□□□ 0.36
HDAC6-219ENST00000476625 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
HDAC6-219ENST00000476625 TXNRD1Q16881 649 aa17.27■□□□□ 0.36
HDAC6-219ENST00000476625 TNS2Q63HR2 1409 aa17.27■□□□□ 0.35
HDAC6-219ENST00000476625 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
HDAC6-219ENST00000476625 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
HDAC6-219ENST00000476625 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
HDAC6-219ENST00000476625 ABCC6O95255 1503 aa17.25■□□□□ 0.35
HDAC6-219ENST00000476625 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
HDAC6-219ENST00000476625 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
HDAC6-219ENST00000476625 BCL9O00512 1426 aa17.24■□□□□ 0.35
HDAC6-219ENST00000476625 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
HDAC6-219ENST00000476625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDAC6-219ENST00000476625 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
HDAC6-219ENST00000476625 NME9Q86XW9 330 aa17.23■□□□□ 0.35
HDAC6-219ENST00000476625 SLC15A2Q16348 729 aa17.22■□□□□ 0.35
HDAC6-219ENST00000476625 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-219ENST00000476625 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
HDAC6-219ENST00000476625 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-219ENST00000476625 EXOC5O00471 708 aa17.21■□□□□ 0.35
HDAC6-219ENST00000476625 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
HDAC6-219ENST00000476625 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
HDAC6-219ENST00000476625 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
HDAC6-219ENST00000476625 ZNF827Q17R98 1081 aa17.2■□□□□ 0.34
HDAC6-219ENST00000476625 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
HDAC6-219ENST00000476625 SHANK3Q9BYB0 1731 aa17.2■□□□□ 0.34
HDAC6-219ENST00000476625 CHD4Q14839 1912 aa17.19■□□□□ 0.34
HDAC6-219ENST00000476625 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
HDAC6-219ENST00000476625 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
HDAC6-219ENST00000476625 SGIP1Q9BQI5 828 aa17.19■□□□□ 0.34
HDAC6-219ENST00000476625 CDCA7Q9BWT1 371 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-219ENST00000476625 SYT17Q9BSW7 474 aa17.18■□□□□ 0.34
HDAC6-219ENST00000476625 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-219ENST00000476625 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
HDAC6-219ENST00000476625 ERBB3P21860 1342 aa17.18■□□□□ 0.34
HDAC6-219ENST00000476625 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
HDAC6-219ENST00000476625 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
HDAC6-219ENST00000476625 KCNQ4P56696 695 aa17.16■□□□□ 0.34
HDAC6-219ENST00000476625 ZNF784Q8NCA9 323 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-219ENST00000476625 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
HDAC6-219ENST00000476625 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
HDAC6-219ENST00000476625 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
HDAC6-219ENST00000476625 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
HDAC6-219ENST00000476625 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
HDAC6-219ENST00000476625 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
HDAC6-219ENST00000476625 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
HDAC6-219ENST00000476625 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
HDAC6-219ENST00000476625 IL2RBP14784 551 aa17.13■□□□□ 0.33
HDAC6-219ENST00000476625 FBLN1P23142 703 aa17.13■□□□□ 0.33
HDAC6-219ENST00000476625 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-219ENST00000476625 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
HDAC6-219ENST00000476625 LY75O60449 1722 aa17.13■□□□□ 0.33
HDAC6-219ENST00000476625 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
HDAC6-219ENST00000476625 ARXQ96QS3 562 aa17.11■□□□□ 0.33
HDAC6-219ENST00000476625 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
HDAC6-219ENST00000476625 UTRNP46939 3433 aa17.09■□□□□ 0.33
HDAC6-219ENST00000476625 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
HDAC6-219ENST00000476625 MEGF6O75095 1541 aa17.07■□□□□ 0.32
HDAC6-219ENST00000476625 NSD2O96028 1365 aa17.07■□□□□ 0.32
HDAC6-219ENST00000476625 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
HDAC6-219ENST00000476625 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
HDAC6-219ENST00000476625 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
HDAC6-219ENST00000476625 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-219ENST00000476625 NLGN2Q8NFZ4 835 aa17.05■□□□□ 0.32
HDAC6-219ENST00000476625 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-219ENST00000476625 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
HDAC6-219ENST00000476625 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
HDAC6-219ENST00000476625 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
HDAC6-219ENST00000476625 IP6K1Q92551 441 aa17.03■□□□□ 0.32
HDAC6-219ENST00000476625 C5P01031 1676 aa17.03■□□□□ 0.32
HDAC6-219ENST00000476625 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms