RNA–Protein interactions for RNA: ENST00000476577.5

SFI1-221, Transcript of SFI1 centrin binding protein, humanhuman

TSL 1 (best)

Gene SFI1, Length 1,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-221ENST00000476577 KIF7Q2M1P5 1343 aa23.61■■□□□ 1.37
SFI1-221ENST00000476577 ONECUT3O60422 494 aaPredicted RBP23.6■■□□□ 1.37
SFI1-221ENST00000476577 GGNBP2Q9H3C7 697 aa23.6■■□□□ 1.37
SFI1-221ENST00000476577 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
SFI1-221ENST00000476577 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
SFI1-221ENST00000476577 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
SFI1-221ENST00000476577 PANK3Q9H999 370 aa23.58■■□□□ 1.37
SFI1-221ENST00000476577 LARP1Q6PKG0 1096 aaKnown RBP23.57■■□□□ 1.36
SFI1-221ENST00000476577 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
SFI1-221ENST00000476577 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
SFI1-221ENST00000476577 CRB1P82279 1406 aa23.56■■□□□ 1.36
SFI1-221ENST00000476577 FAM98CQ17RN3 349 aaKnown RBP23.56■■□□□ 1.36
SFI1-221ENST00000476577 SEPT12Q8IYM1 358 aa23.56■■□□□ 1.36
SFI1-221ENST00000476577 WDR17Q8IZU2 1322 aa23.54■■□□□ 1.36
SFI1-221ENST00000476577 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
SFI1-221ENST00000476577 CCDC7Q96M83 1385 aa23.53■■□□□ 1.36
SFI1-221ENST00000476577 A0A0G2JS52 829 aa23.53■■□□□ 1.36
SFI1-221ENST00000476577 MYT1Q01538 1121 aa23.53■■□□□ 1.36
SFI1-221ENST00000476577 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
SFI1-221ENST00000476577 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
SFI1-221ENST00000476577 BLMP54132 1417 aaPredicted RBP23.52■■□□□ 1.36
SFI1-221ENST00000476577 BARGINQ6ZT62 677 aa23.51■■□□□ 1.35
SFI1-221ENST00000476577 TOM1L2Q6ZVM7 507 aa23.51■■□□□ 1.35
SFI1-221ENST00000476577 TCP11L2Q8N4U5 519 aa23.51■■□□□ 1.35
SFI1-221ENST00000476577 CSB-PGBD3P0DP91 1061 aa23.5■■□□□ 1.35
SFI1-221ENST00000476577 IP6K1Q92551 441 aa23.5■■□□□ 1.35
SFI1-221ENST00000476577 MAP3K19Q56UN5 1328 aa23.5■■□□□ 1.35
SFI1-221ENST00000476577 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
SFI1-221ENST00000476577 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
SFI1-221ENST00000476577 NSD2O96028 1365 aa23.49■■□□□ 1.35
SFI1-221ENST00000476577 MAP2P11137 1827 aaKnown RBP23.49■■□□□ 1.35
SFI1-221ENST00000476577 AMPHP49418 695 aa23.49■■□□□ 1.35
SFI1-221ENST00000476577 KNSTRNQ9Y448 316 aa23.49■■□□□ 1.35
SFI1-221ENST00000476577 WNK3Q9BYP7 1800 aa23.49■■□□□ 1.35
SFI1-221ENST00000476577 ERBB3P21860 1342 aa23.48■■□□□ 1.35
SFI1-221ENST00000476577 FBLN1P23142 703 aa23.48■■□□□ 1.35
SFI1-221ENST00000476577 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
SFI1-221ENST00000476577 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
SFI1-221ENST00000476577 KRT27Q7Z3Y8 459 aa23.47■■□□□ 1.35
SFI1-221ENST00000476577 PARP4Q9UKK3 1724 aaKnown RBP23.47■■□□□ 1.35
SFI1-221ENST00000476577 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
SFI1-221ENST00000476577 HOXC9P31274 260 aa23.46■■□□□ 1.35
SFI1-221ENST00000476577 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
SFI1-221ENST00000476577 CARD10Q9BWT7 1032 aa23.46■■□□□ 1.35
SFI1-221ENST00000476577 ANKRD24Q8TF21 1146 aa23.45■■□□□ 1.34
SFI1-221ENST00000476577 UPF1Q92900 1129 aaKnown RBP eCLIP23.45■■□□□ 1.34
SFI1-221ENST00000476577 EP400Q96L91 3159 aa23.45■■□□□ 1.34
SFI1-221ENST00000476577 PEAK1Q9H792 1746 aa23.42■■□□□ 1.34
SFI1-221ENST00000476577 CDCA7Q9BWT1 371 aaPredicted RBP23.42■■□□□ 1.34
SFI1-221ENST00000476577 FLT4P35916 1363 aa23.41■■□□□ 1.34
SFI1-221ENST00000476577 NLRP2Q9NX02 1062 aa23.41■■□□□ 1.34
SFI1-221ENST00000476577 LTV1Q96GA3 475 aaPredicted RBP23.39■■□□□ 1.34
SFI1-221ENST00000476577 RGPD2P0DJD1 1756 aa23.39■■□□□ 1.33
SFI1-221ENST00000476577 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
SFI1-221ENST00000476577 LRRC37A3O60309 1634 aa23.39■■□□□ 1.33
SFI1-221ENST00000476577 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
SFI1-221ENST00000476577 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
SFI1-221ENST00000476577 INSRP06213 1382 aa23.38■■□□□ 1.33
SFI1-221ENST00000476577 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
SFI1-221ENST00000476577 MORC1Q86VD1 984 aa23.37■■□□□ 1.33
SFI1-221ENST00000476577 EMILIN1Q9Y6C2 1016 aa23.37■■□□□ 1.33
SFI1-221ENST00000476577 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
SFI1-221ENST00000476577 DISP2A7MBM2 1401 aa23.36■■□□□ 1.33
SFI1-221ENST00000476577 TNNT2P45379 298 aaPredicted RBP23.36■■□□□ 1.33
SFI1-221ENST00000476577 HSP90AB2PQ58FF8 381 aa23.36■■□□□ 1.33
SFI1-221ENST00000476577 PPM1GO15355 546 aaPredicted RBP23.35■■□□□ 1.33
SFI1-221ENST00000476577 DDB1Q16531 1140 aa23.35■■□□□ 1.33
SFI1-221ENST00000476577 POLKQ9UBT6 870 aa23.35■■□□□ 1.33
SFI1-221ENST00000476577 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
SFI1-221ENST00000476577 RGPD1P0DJD0 1748 aa23.31■■□□□ 1.32
SFI1-221ENST00000476577 IL2RBP14784 551 aa23.31■■□□□ 1.32
SFI1-221ENST00000476577 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
SFI1-221ENST00000476577 FAM196AQ6ZSG2 479 aa23.31■■□□□ 1.32
SFI1-221ENST00000476577 EXOC5O00471 708 aa23.3■■□□□ 1.32
SFI1-221ENST00000476577 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
SFI1-221ENST00000476577 TNS2Q63HR2 1409 aa23.28■■□□□ 1.32
SFI1-221ENST00000476577 SF3B2Q13435 895 aaKnown RBP23.28■■□□□ 1.32
SFI1-221ENST00000476577 NBPF6Q5VWK0 638 aa23.28■■□□□ 1.32
SFI1-221ENST00000476577 NBPF4Q96M43 638 aa23.28■■□□□ 1.32
SFI1-221ENST00000476577 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
SFI1-221ENST00000476577 SBF2Q86WG5 1849 aa23.25■■□□□ 1.31
SFI1-221ENST00000476577 TNS1Q9HBL0 1735 aaKnown RBP23.24■■□□□ 1.31
SFI1-221ENST00000476577 MARCH10Q8NA82 808 aaPredicted RBP23.23■■□□□ 1.31
SFI1-221ENST00000476577 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
SFI1-221ENST00000476577 RAPGEF4Q8WZA2 1011 aa23.22■■□□□ 1.31
SFI1-221ENST00000476577 BCL9O00512 1426 aa23.21■■□□□ 1.31
SFI1-221ENST00000476577 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
SFI1-221ENST00000476577 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
SFI1-221ENST00000476577 EIF4A2Q14240 407 aaKnown RBP23.2■■□□□ 1.3
SFI1-221ENST00000476577 MEGF6O75095 1541 aa23.2■■□□□ 1.3
SFI1-221ENST00000476577 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
SFI1-221ENST00000476577 TRIM37O94972 964 aa23.19■■□□□ 1.3
SFI1-221ENST00000476577 EYA1Q99502 592 aa23.19■■□□□ 1.3
SFI1-221ENST00000476577 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
SFI1-221ENST00000476577 BAG6P46379 1132 aa23.18■■□□□ 1.3
SFI1-221ENST00000476577 MTHFSP49914 203 aa23.17■■□□□ 1.3
SFI1-221ENST00000476577 ZCRB1Q8TBF4 217 aaKnown RBP23.17■■□□□ 1.3
SFI1-221ENST00000476577 KAT6BQ8WYB5 2073 aa23.16■■□□□ 1.3
SFI1-221ENST00000476577 DEFB132Q7Z7B7 95 aa23.15■■□□□ 1.3
SFI1-221ENST00000476577 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms