RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
NUP58-209ENST00000476553 LILRB3O75022 631 aa12.48□□□□□ -0.41
NUP58-209ENST00000476553 CCDC155Q8N6L0 562 aa12.48□□□□□ -0.41
NUP58-209ENST00000476553 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
NUP58-209ENST00000476553 MYSM1Q5VVJ2 828 aa12.47□□□□□ -0.41
NUP58-209ENST00000476553 TSC1Q92574 1164 aa12.47□□□□□ -0.41
NUP58-209ENST00000476553 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
NUP58-209ENST00000476553 SLC35F4A4IF30 521 aa12.46□□□□□ -0.41
NUP58-209ENST00000476553 TRIM66O15016 1216 aa12.46□□□□□ -0.41
NUP58-209ENST00000476553 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
NUP58-209ENST00000476553 PPP1R26Q5T8A7 1209 aaPredicted RBP12.46□□□□□ -0.41
NUP58-209ENST00000476553 SVOPQ8N4V2 548 aa12.46□□□□□ -0.41
NUP58-209ENST00000476553 CBLBQ13191 982 aa12.45□□□□□ -0.42
NUP58-209ENST00000476553 FIGNL2A6NMB9 653 aa12.44□□□□□ -0.42
NUP58-209ENST00000476553 ARHGEF15O94989 841 aa12.44□□□□□ -0.42
NUP58-209ENST00000476553 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
NUP58-209ENST00000476553 PGPEP1Q9NXJ5 209 aa12.44□□□□□ -0.42
NUP58-209ENST00000476553 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
NUP58-209ENST00000476553 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
NUP58-209ENST00000476553 DNMT3AQ9Y6K1 912 aaPredicted RBP12.43□□□□□ -0.42
NUP58-209ENST00000476553 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
NUP58-209ENST00000476553 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
NUP58-209ENST00000476553 ITGA6P23229 1130 aa12.42□□□□□ -0.42
NUP58-209ENST00000476553 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
NUP58-209ENST00000476553 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
NUP58-209ENST00000476553 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
NUP58-209ENST00000476553 IRS1P35568 1242 aa12.37□□□□□ -0.43
NUP58-209ENST00000476553 VWA5B2Q8N398 1253 aa12.37□□□□□ -0.43
NUP58-209ENST00000476553 IGHA1P01876 353 aa12.36□□□□□ -0.43
NUP58-209ENST00000476553 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
NUP58-209ENST00000476553 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
NUP58-209ENST00000476553 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
NUP58-209ENST00000476553 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 AK7Q96M32 723 aa12.35□□□□□ -0.43
NUP58-209ENST00000476553 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
NUP58-209ENST00000476553 CDC14CA4D256 554 aa12.34□□□□□ -0.43
NUP58-209ENST00000476553 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
NUP58-209ENST00000476553 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
NUP58-209ENST00000476553 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
NUP58-209ENST00000476553 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
NUP58-209ENST00000476553 INSM2Q96T92 566 aaPredicted RBP12.33□□□□□ -0.44
NUP58-209ENST00000476553 ARHGAP9Q9BRR9 750 aa12.33□□□□□ -0.44
NUP58-209ENST00000476553 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
NUP58-209ENST00000476553 FOXK2Q01167 660 aa12.32□□□□□ -0.44
NUP58-209ENST00000476553 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
NUP58-209ENST00000476553 RELBQ01201 579 aa12.3□□□□□ -0.44
NUP58-209ENST00000476553 FKBPLQ9UIM3 349 aa12.3□□□□□ -0.44
NUP58-209ENST00000476553 MARSP56192 900 aaKnown RBP12.29□□□□□ -0.44
NUP58-209ENST00000476553 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
NUP58-209ENST00000476553 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
NUP58-209ENST00000476553 PDE4DQ08499 809 aa12.28□□□□□ -0.44
NUP58-209ENST00000476553 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
NUP58-209ENST00000476553 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
NUP58-209ENST00000476553 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.45
NUP58-209ENST00000476553 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
NUP58-209ENST00000476553 LYPD4Q6UWN0 246 aa12.27□□□□□ -0.45
NUP58-209ENST00000476553 GAS6Q14393 721 aa12.26□□□□□ -0.45
NUP58-209ENST00000476553 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
NUP58-209ENST00000476553 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
NUP58-209ENST00000476553 ADH1AP07327 375 aa12.23□□□□□ -0.45
NUP58-209ENST00000476553 LRRN4Q8WUT4 740 aa12.23□□□□□ -0.45
NUP58-209ENST00000476553 ZNF395Q9H8N7 513 aaPredicted RBP12.23□□□□□ -0.45
NUP58-209ENST00000476553 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
NUP58-209ENST00000476553 CELA2BP08218 269 aaPredicted RBP12.22□□□□□ -0.45
NUP58-209ENST00000476553 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
NUP58-209ENST00000476553 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
NUP58-209ENST00000476553 GPSM3Q9Y4H4 160 aa12.22□□□□□ -0.45
NUP58-209ENST00000476553 KDF1Q8NAX2 398 aaPredicted RBP12.21□□□□□ -0.45
NUP58-209ENST00000476553 TMPRSS4Q9NRS4 437 aa12.21□□□□□ -0.45
NUP58-209ENST00000476553 LILRA1O75019 489 aa12.2□□□□□ -0.46
NUP58-209ENST00000476553 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
NUP58-209ENST00000476553 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
NUP58-209ENST00000476553 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
NUP58-209ENST00000476553 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
NUP58-209ENST00000476553 PTK2Q05397 1052 aa12.18□□□□□ -0.46
NUP58-209ENST00000476553 NR6A1Q15406 480 aa12.18□□□□□ -0.46
NUP58-209ENST00000476553 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
NUP58-209ENST00000476553 PTGIRP43119 386 aa12.16□□□□□ -0.46
NUP58-209ENST00000476553 LYSMD3Q7Z3D4 306 aa12.16□□□□□ -0.46
NUP58-209ENST00000476553 PLA2G4EQ3MJ16 856 aa12.15□□□□□ -0.46
NUP58-209ENST00000476553 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
NUP58-209ENST00000476553 ZNF837Q96EG3 531 aaPredicted RBP12.15□□□□□ -0.46
NUP58-209ENST00000476553 ITGB2P05107 769 aa12.14□□□□□ -0.47
NUP58-209ENST00000476553 ENAMQ9NRM1 1142 aa12.14□□□□□ -0.47
NUP58-209ENST00000476553 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
NUP58-209ENST00000476553 ESPNB1AK53 854 aa12.13□□□□□ -0.47
NUP58-209ENST00000476553 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
NUP58-209ENST00000476553 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
NUP58-209ENST00000476553 ADAM23O75077 832 aa12.12□□□□□ -0.47
NUP58-209ENST00000476553 XP32Q5T750 250 aa12.12□□□□□ -0.47
NUP58-209ENST00000476553 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
NUP58-209ENST00000476553 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
NUP58-209ENST00000476553 MSTNO14793 375 aa12.11□□□□□ -0.47
NUP58-209ENST00000476553 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
NUP58-209ENST00000476553 SPOCK3Q9BQ16 436 aa12.11□□□□□ -0.47
NUP58-209ENST00000476553 RNF144AP50876 292 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms