RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
CLDN4-205ENST00000476494 AKT1S1Q96B36 256 aa9.86□□□□□ -0.83
CLDN4-205ENST00000476494 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
CLDN4-205ENST00000476494 CPDO75976 1380 aa9.86□□□□□ -0.83
CLDN4-205ENST00000476494 KLHL34Q8N239 644 aa9.85□□□□□ -0.83
CLDN4-205ENST00000476494 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
CLDN4-205ENST00000476494 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
CLDN4-205ENST00000476494 DDB1Q16531 1140 aa9.84□□□□□ -0.83
CLDN4-205ENST00000476494 PNPLA7Q6ZV29 1317 aa9.83□□□□□ -0.84
CLDN4-205ENST00000476494 CRB1P82279 1406 aa9.83□□□□□ -0.84
CLDN4-205ENST00000476494 POLD1P28340 1107 aa9.83□□□□□ -0.84
CLDN4-205ENST00000476494 FAM50AQ14320 339 aaKnown RBP9.83□□□□□ -0.84
CLDN4-205ENST00000476494 AKAP12Q02952 1782 aa9.83□□□□□ -0.84
CLDN4-205ENST00000476494 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
CLDN4-205ENST00000476494 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
CLDN4-205ENST00000476494 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
CLDN4-205ENST00000476494 HSPA1AP0DMV8 641 aaKnown RBP9.81□□□□□ -0.84
CLDN4-205ENST00000476494 HSPA1BP0DMV9 641 aaKnown RBP9.81□□□□□ -0.84
CLDN4-205ENST00000476494 WNK3Q9BYP7 1800 aa9.81□□□□□ -0.84
CLDN4-205ENST00000476494 PIK3C2GO75747 1445 aa9.81□□□□□ -0.84
CLDN4-205ENST00000476494 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
CLDN4-205ENST00000476494 PRAM1Q96QH2 718 aa9.8□□□□□ -0.84
CLDN4-205ENST00000476494 TULP4Q9NRJ4 1543 aa9.8□□□□□ -0.84
CLDN4-205ENST00000476494 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
CLDN4-205ENST00000476494 USP19O94966 1318 aa9.8□□□□□ -0.84
CLDN4-205ENST00000476494 SAFB2Q14151 953 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLDN4-205ENST00000476494 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
CLDN4-205ENST00000476494 C14orf93Q9H972 538 aaKnown RBP9.78□□□□□ -0.84
CLDN4-205ENST00000476494 NMRK2Q9NPI5 230 aa9.78□□□□□ -0.84
CLDN4-205ENST00000476494 CD2APQ9Y5K6 639 aa9.78□□□□□ -0.84
CLDN4-205ENST00000476494 COL18A1P39060 1754 aa9.78□□□□□ -0.84
CLDN4-205ENST00000476494 BTAF1O14981 1849 aa9.77□□□□□ -0.84
CLDN4-205ENST00000476494 ANKRD30BQ9BXX2 1392 aa9.77□□□□□ -0.84
CLDN4-205ENST00000476494 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
CLDN4-205ENST00000476494 NGDNQ8NEJ9 315 aaKnown RBP9.77□□□□□ -0.85
CLDN4-205ENST00000476494 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
CLDN4-205ENST00000476494 CICQ96RK0 1608 aaPredicted RBP9.76□□□□□ -0.85
CLDN4-205ENST00000476494 GCP02774 474 aa9.76□□□□□ -0.85
CLDN4-205ENST00000476494 FSTL1Q12841 308 aa9.76□□□□□ -0.85
CLDN4-205ENST00000476494 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
CLDN4-205ENST00000476494 CDCA7Q9BWT1 371 aaPredicted RBP9.75□□□□□ -0.85
CLDN4-205ENST00000476494 WASLO00401 505 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-205ENST00000476494 HIRIP3Q9BW71 556 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-205ENST00000476494 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
CLDN4-205ENST00000476494 KAT6BQ8WYB5 2073 aa9.74□□□□□ -0.85
CLDN4-205ENST00000476494 POLR3AO14802 1390 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-205ENST00000476494 USP6P35125 1406 aa9.73□□□□□ -0.85
CLDN4-205ENST00000476494 RGS19P49795 217 aa9.73□□□□□ -0.85
CLDN4-205ENST00000476494 APLP2Q06481 763 aa9.73□□□□□ -0.85
CLDN4-205ENST00000476494 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
CLDN4-205ENST00000476494 EXOC5O00471 708 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
CLDN4-205ENST00000476494 KIAA1210Q9ULL0 1709 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
CLDN4-205ENST00000476494 KCNQ4P56696 695 aa9.71□□□□□ -0.86
CLDN4-205ENST00000476494 RGL3Q3MIN7 710 aa9.71□□□□□ -0.86
CLDN4-205ENST00000476494 ABTB2Q8N961 1025 aa9.71□□□□□ -0.86
CLDN4-205ENST00000476494 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.86
CLDN4-205ENST00000476494 EIF3AQ14152 1382 aaKnown RBP9.71□□□□□ -0.86
CLDN4-205ENST00000476494 NUDT16Q96DE0 195 aaKnown RBP9.7□□□□□ -0.86
CLDN4-205ENST00000476494 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
CLDN4-205ENST00000476494 POGKQ9P215 609 aa9.7□□□□□ -0.86
CLDN4-205ENST00000476494 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
CLDN4-205ENST00000476494 TRPM1Q7Z4N2 1603 aa9.7□□□□□ -0.86
CLDN4-205ENST00000476494 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
CLDN4-205ENST00000476494 ACEP12821 1306 aa9.69□□□□□ -0.86
CLDN4-205ENST00000476494 ITSN1Q15811 1721 aa9.69□□□□□ -0.86
CLDN4-205ENST00000476494 C10orf71Q711Q0 1435 aa9.69□□□□□ -0.86
CLDN4-205ENST00000476494 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
CLDN4-205ENST00000476494 PRDM10Q9NQV6 1147 aa9.69□□□□□ -0.86
CLDN4-205ENST00000476494 LY75O60449 1722 aa9.68□□□□□ -0.86
CLDN4-205ENST00000476494 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
CLDN4-205ENST00000476494 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
CLDN4-205ENST00000476494 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
CLDN4-205ENST00000476494 NLRP13Q86W25 1043 aa9.68□□□□□ -0.86
CLDN4-205ENST00000476494 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
CLDN4-205ENST00000476494 ABCC6O95255 1503 aa9.67□□□□□ -0.86
CLDN4-205ENST00000476494 FOXN1O15353 648 aa9.67□□□□□ -0.86
CLDN4-205ENST00000476494 PDE4DIPQ5VU43 2346 aa9.67□□□□□ -0.86
CLDN4-205ENST00000476494 SLIT3O75094 1523 aa9.66□□□□□ -0.86
CLDN4-205ENST00000476494 TNRC18O15417 2968 aaPredicted RBP9.66□□□□□ -0.86
CLDN4-205ENST00000476494 MLLT1Q03111 559 aaPredicted RBP9.66□□□□□ -0.86
CLDN4-205ENST00000476494 KIAA1551Q9HCM1 1747 aa9.65□□□□□ -0.86
CLDN4-205ENST00000476494 ABHD8Q96I13 439 aa9.65□□□□□ -0.86
CLDN4-205ENST00000476494 PXDNLA1KZ92 1463 aa9.65□□□□□ -0.87
CLDN4-205ENST00000476494 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
CLDN4-205ENST00000476494 TRAK1Q9UPV9 953 aa9.64□□□□□ -0.87
CLDN4-205ENST00000476494 PPIP5K1Q6PFW1 1433 aa9.64□□□□□ -0.87
CLDN4-205ENST00000476494 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
CLDN4-205ENST00000476494 SMC1BQ8NDV3 1235 aa9.63□□□□□ -0.87
CLDN4-205ENST00000476494 NSD2O96028 1365 aa9.63□□□□□ -0.87
CLDN4-205ENST00000476494 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
CLDN4-205ENST00000476494 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
CLDN4-205ENST00000476494 USP54Q70EL1 1684 aa9.62□□□□□ -0.87
CLDN4-205ENST00000476494 RRAGCQ9HB90 399 aa9.62□□□□□ -0.87
CLDN4-205ENST00000476494 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
CLDN4-205ENST00000476494 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms