RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 TRIM50Q86XT4 487 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 LARGE2Q8N3Y3 721 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 ZBED2Q9BTP6 218 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 SLC27A5Q9Y2P5 690 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 PRMT3O60678 531 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 DKK1O94907 266 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 RECKO95980 971 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 UBXN4Q92575 508 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 ASB16Q96NS5 453 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 KCNK17Q96T54 332 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 GPSM3Q9Y4H4 160 aa7.62□□□□□ -1.19
SRGAP3-205ENST00000475560 SMARCA5O60264 1052 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 MAPK1P28482 360 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 PTK2Q05397 1052 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 COL19A1Q14993 1142 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 ECM1Q16610 540 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 OCLNQ16625 522 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 TRAF7Q6Q0C0 670 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 SPATA32Q96LK8 384 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 CXXC1Q9P0U4 656 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 RABGEF1Q9UJ41 708 aa7.61□□□□□ -1.19
SRGAP3-205ENST00000475560 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 H3BRB1 525 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 ZNF211Q13398 564 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 PUS10Q3MIT2 529 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 GLYCTKQ8IVS8 523 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 ZSCAN29Q8IWY8 852 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 TUT1Q9H6E5 874 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 DCTN4Q9UJW0 460 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 NOD1Q9Y239 953 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 PCDHB9Q9Y5E1 797 aa7.6□□□□□ -1.19
SRGAP3-205ENST00000475560 SEC13P55735 322 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 SF3A1Q15459 793 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 TSNAXIP1Q2TAA8 658 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 PDXDC2PQ6P474 469 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 SIX5Q8N196 739 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 RNF166Q96A37 237 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 BCL11AQ9H165 835 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 MAP10Q9P2G4 905 aa7.59□□□□□ -1.19
SRGAP3-205ENST00000475560 PPM1GO15355 546 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 C21orf2O43822 256 aa7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 PBX2P40425 430 aa7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
SRGAP3-205ENST00000475560 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 ERCC5P28715 1186 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 RNF19BQ6ZMZ0 732 aa7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 BACH2Q9BYV9 841 aa7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
SRGAP3-205ENST00000475560 CTHP32929 405 aa7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 LSM11P83369 360 aaKnown RBP eCLIP7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 PTPRNQ16849 979 aa7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 CCDC102BQ68D86 513 aa7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 BLOC1S3Q6QNY0 202 aa7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 GPKOWQ92917 476 aaPredicted RBP eCLIP7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 SALL2Q9Y467 1007 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-205ENST00000475560 ARHGAP4P98171 946 aa7.55□□□□□ -1.2
SRGAP3-205ENST00000475560 SF3B2Q13435 895 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-205ENST00000475560 SLC4A5Q9BY07 1137 aa7.55□□□□□ -1.2
SRGAP3-205ENST00000475560 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
SRGAP3-205ENST00000475560 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-205ENST00000475560 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
SRGAP3-205ENST00000475560 JUNDP17535 347 aa7.54□□□□□ -1.2
SRGAP3-205ENST00000475560 GTF2IP78347 998 aa7.54□□□□□ -1.2
SRGAP3-205ENST00000475560 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
SRGAP3-205ENST00000475560 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 RNF40O75150 1001 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 PSEN2P49810 448 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 POTEEQ6S8J3 1075 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 EVA1BQ9NVM1 165 aa7.53□□□□□ -1.2
SRGAP3-205ENST00000475560 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 HDLBPQ00341 1268 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 TPCN2Q8NHX9 752 aa7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 HINFPQ9BQA5 517 aa7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
SRGAP3-205ENST00000475560 LGR5O75473 907 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms