RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 USP19O94966 1318 aa20.81■□□□□ 0.92
ATG9A-220ENST00000475339 ZBTB7CA1YPR0 619 aa20.81■□□□□ 0.92
ATG9A-220ENST00000475339 GCP02774 474 aa20.81■□□□□ 0.92
ATG9A-220ENST00000475339 BCL9O00512 1426 aa20.8■□□□□ 0.92
ATG9A-220ENST00000475339 TOM1L2Q6ZVM7 507 aa20.8■□□□□ 0.92
ATG9A-220ENST00000475339 ADGRB1O14514 1584 aa20.8■□□□□ 0.92
ATG9A-220ENST00000475339 ACEP12821 1306 aa20.79■□□□□ 0.92
ATG9A-220ENST00000475339 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
ATG9A-220ENST00000475339 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
ATG9A-220ENST00000475339 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
ATG9A-220ENST00000475339 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
ATG9A-220ENST00000475339 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
ATG9A-220ENST00000475339 ATP10DQ9P241 1426 aa20.76■□□□□ 0.91
ATG9A-220ENST00000475339 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
ATG9A-220ENST00000475339 YBX3P16989 372 aaKnown RBP eCLIP20.74■□□□□ 0.91
ATG9A-220ENST00000475339 ZNF827Q17R98 1081 aa20.74■□□□□ 0.91
ATG9A-220ENST00000475339 GPBP1L1Q9HC44 474 aaPredicted RBP20.74■□□□□ 0.91
ATG9A-220ENST00000475339 CDCA7Q9BWT1 371 aaPredicted RBP20.73■□□□□ 0.91
ATG9A-220ENST00000475339 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
ATG9A-220ENST00000475339 GRIN3BO60391 1043 aa20.72■□□□□ 0.91
ATG9A-220ENST00000475339 POLD1P28340 1107 aa20.72■□□□□ 0.91
ATG9A-220ENST00000475339 CCDC61Q9Y6R9 512 aa20.72■□□□□ 0.91
ATG9A-220ENST00000475339 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
ATG9A-220ENST00000475339 AKAP12Q02952 1782 aa20.7■□□□□ 0.9
ATG9A-220ENST00000475339 PAPPAQ13219 1627 aa20.69■□□□□ 0.9
ATG9A-220ENST00000475339 EXOC5O00471 708 aa20.69■□□□□ 0.9
ATG9A-220ENST00000475339 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
ATG9A-220ENST00000475339 AXIN2Q9Y2T1 843 aa20.69■□□□□ 0.9
ATG9A-220ENST00000475339 WDR17Q8IZU2 1322 aa20.69■□□□□ 0.9
ATG9A-220ENST00000475339 ZNF526Q8TF50 670 aaPredicted RBP20.68■□□□□ 0.9
ATG9A-220ENST00000475339 SLC16A10Q8TF71 515 aa20.68■□□□□ 0.9
ATG9A-220ENST00000475339 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
ATG9A-220ENST00000475339 WNK3Q9BYP7 1800 aa20.65■□□□□ 0.9
ATG9A-220ENST00000475339 NLRP6P59044 892 aa20.64■□□□□ 0.89
ATG9A-220ENST00000475339 AKT1S1Q96B36 256 aa20.64■□□□□ 0.89
ATG9A-220ENST00000475339 CARD10Q9BWT7 1032 aa20.64■□□□□ 0.89
ATG9A-220ENST00000475339 TOPAZ1Q8N9V7 1692 aa20.64■□□□□ 0.89
ATG9A-220ENST00000475339 CAPN15O75808 1086 aa20.63■□□□□ 0.89
ATG9A-220ENST00000475339 KDM2AQ9Y2K7 1162 aa20.63■□□□□ 0.89
ATG9A-220ENST00000475339 PNPLA7Q6ZV29 1317 aa20.62■□□□□ 0.89
ATG9A-220ENST00000475339 CSB-PGBD3P0DP91 1061 aa20.62■□□□□ 0.89
ATG9A-220ENST00000475339 COL18A1P39060 1754 aa20.61■□□□□ 0.89
ATG9A-220ENST00000475339 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
ATG9A-220ENST00000475339 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
ATG9A-220ENST00000475339 USP6P35125 1406 aa20.6■□□□□ 0.89
ATG9A-220ENST00000475339 ADCY9O60503 1353 aa20.59■□□□□ 0.89
ATG9A-220ENST00000475339 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
ATG9A-220ENST00000475339 DNAJC5GQ8N7S2 189 aa20.58■□□□□ 0.89
ATG9A-220ENST00000475339 TFCP2L1Q9NZI6 479 aa20.58■□□□□ 0.89
ATG9A-220ENST00000475339 TNS2Q63HR2 1409 aa20.58■□□□□ 0.88
ATG9A-220ENST00000475339 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
ATG9A-220ENST00000475339 SLIT3O75094 1523 aa20.58■□□□□ 0.88
ATG9A-220ENST00000475339 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
ATG9A-220ENST00000475339 PPIP5K1Q6PFW1 1433 aa20.56■□□□□ 0.88
ATG9A-220ENST00000475339 APLP1P51693 650 aa20.56■□□□□ 0.88
ATG9A-220ENST00000475339 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
ATG9A-220ENST00000475339 DCAF11Q8TEB1 546 aa20.56■□□□□ 0.88
ATG9A-220ENST00000475339 KIF3CO14782 793 aa20.55■□□□□ 0.88
ATG9A-220ENST00000475339 BTAF1O14981 1849 aa20.55■□□□□ 0.88
ATG9A-220ENST00000475339 CPSF1Q10570 1443 aaKnown RBP20.54■□□□□ 0.88
ATG9A-220ENST00000475339 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
ATG9A-220ENST00000475339 KCNQ4P56696 695 aa20.54■□□□□ 0.88
ATG9A-220ENST00000475339 SOX12O15370 315 aa20.53■□□□□ 0.88
ATG9A-220ENST00000475339 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
ATG9A-220ENST00000475339 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
ATG9A-220ENST00000475339 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
ATG9A-220ENST00000475339 QSER1Q2KHR3 1735 aa20.51■□□□□ 0.87
ATG9A-220ENST00000475339 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
ATG9A-220ENST00000475339 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
ATG9A-220ENST00000475339 ABCC6O95255 1503 aa20.49■□□□□ 0.87
ATG9A-220ENST00000475339 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
ATG9A-220ENST00000475339 MSH5O43196 834 aa20.48■□□□□ 0.87
ATG9A-220ENST00000475339 PRELPP51888 382 aa20.48■□□□□ 0.87
ATG9A-220ENST00000475339 MSL1Q68DK7 614 aa20.48■□□□□ 0.87
ATG9A-220ENST00000475339 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
ATG9A-220ENST00000475339 TUBGCP6Q96RT7 1819 aa20.47■□□□□ 0.87
ATG9A-220ENST00000475339 COL23A1Q86Y22 540 aaPredicted RBP20.46■□□□□ 0.87
ATG9A-220ENST00000475339 TNS4Q8IZW8 715 aa20.46■□□□□ 0.87
ATG9A-220ENST00000475339 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
ATG9A-220ENST00000475339 CD2APQ9Y5K6 639 aa20.46■□□□□ 0.87
ATG9A-220ENST00000475339 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
ATG9A-220ENST00000475339 IL2RBP14784 551 aa20.44■□□□□ 0.86
ATG9A-220ENST00000475339 NLRP2Q9NX02 1062 aa20.44■□□□□ 0.86
ATG9A-220ENST00000475339 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
ATG9A-220ENST00000475339 STAC3Q96MF2 364 aa20.43■□□□□ 0.86
ATG9A-220ENST00000475339 TOMM70O94826 608 aa20.42■□□□□ 0.86
ATG9A-220ENST00000475339 HTRA3P83110 453 aa20.4■□□□□ 0.86
ATG9A-220ENST00000475339 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
ATG9A-220ENST00000475339 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
ATG9A-220ENST00000475339 KLRG1Q96E93 195 aa20.39■□□□□ 0.85
ATG9A-220ENST00000475339 ERBB3P21860 1342 aa20.38■□□□□ 0.85
ATG9A-220ENST00000475339 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
ATG9A-220ENST00000475339 JMYQ8N9B5 988 aa20.38■□□□□ 0.85
ATG9A-220ENST00000475339 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
ATG9A-220ENST00000475339 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
ATG9A-220ENST00000475339 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
ATG9A-220ENST00000475339 NFAT5O94916 1531 aa20.36■□□□□ 0.85
ATG9A-220ENST00000475339 PCNTO95613 3336 aa20.36■□□□□ 0.85
ATG9A-220ENST00000475339 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
ATG9A-220ENST00000475339 NBPF1Q3BBV0 1214 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms