RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ABCC6O95255 1503 aa25.62■■□□□ 1.69
PCGF3-209ENST00000475288 TTC21AQ8NDW8 1320 aa25.62■■□□□ 1.69
PCGF3-209ENST00000475288 PLSCR1O15162 318 aa25.61■■□□□ 1.69
PCGF3-209ENST00000475288 DDB1Q16531 1140 aa25.61■■□□□ 1.69
PCGF3-209ENST00000475288 TOM1L2Q6ZVM7 507 aa25.61■■□□□ 1.69
PCGF3-209ENST00000475288 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
PCGF3-209ENST00000475288 TTC21BQ7Z4L5 1316 aa25.61■■□□□ 1.69
PCGF3-209ENST00000475288 ARHGEF25Q86VW2 580 aa25.6■■□□□ 1.69
PCGF3-209ENST00000475288 ROCK2O75116 1388 aaKnown RBP25.59■■□□□ 1.69
PCGF3-209ENST00000475288 ZBTB7CA1YPR0 619 aa25.58■■□□□ 1.69
PCGF3-209ENST00000475288 AXIN2Q9Y2T1 843 aa25.58■■□□□ 1.69
PCGF3-209ENST00000475288 NFAT5O94916 1531 aa25.58■■□□□ 1.68
PCGF3-209ENST00000475288 BCL11BQ9C0K0 894 aaPredicted RBP25.57■■□□□ 1.68
PCGF3-209ENST00000475288 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
PCGF3-209ENST00000475288 CARD10Q9BWT7 1032 aa25.55■■□□□ 1.68
PCGF3-209ENST00000475288 SPON1Q9HCB6 807 aa25.55■■□□□ 1.68
PCGF3-209ENST00000475288 USP54Q70EL1 1684 aa25.55■■□□□ 1.68
PCGF3-209ENST00000475288 MON2Q7Z3U7 1717 aa25.54■■□□□ 1.68
PCGF3-209ENST00000475288 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
PCGF3-209ENST00000475288 KCNQ2O43526 872 aa25.53■■□□□ 1.68
PCGF3-209ENST00000475288 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
PCGF3-209ENST00000475288 SIN3AQ96ST3 1273 aa25.52■■□□□ 1.68
PCGF3-209ENST00000475288 CASZ1Q86V15 1759 aa25.51■■□□□ 1.67
PCGF3-209ENST00000475288 KTN1Q86UP2 1357 aaKnown RBP25.51■■□□□ 1.67
PCGF3-209ENST00000475288 CCDC7Q96M83 1385 aa25.51■■□□□ 1.67
PCGF3-209ENST00000475288 NINLQ9Y2I6 1382 aa25.51■■□□□ 1.67
PCGF3-209ENST00000475288 USP31Q70CQ4 1352 aa25.5■■□□□ 1.67
PCGF3-209ENST00000475288 TNS2Q63HR2 1409 aa25.46■■□□□ 1.67
PCGF3-209ENST00000475288 CSB-PGBD3P0DP91 1061 aa25.46■■□□□ 1.67
PCGF3-209ENST00000475288 PTF1AQ7RTS3 328 aa25.46■■□□□ 1.67
PCGF3-209ENST00000475288 ANO8Q9HCE9 1232 aaPredicted RBP25.46■■□□□ 1.67
PCGF3-209ENST00000475288 PPP1R1BQ9UD71 204 aaPredicted RBP25.46■■□□□ 1.67
PCGF3-209ENST00000475288 EXOC5O00471 708 aa25.45■■□□□ 1.66
PCGF3-209ENST00000475288 PROM2Q8N271 834 aa25.45■■□□□ 1.66
PCGF3-209ENST00000475288 CD163L1Q9NR16 1453 aa25.44■■□□□ 1.66
PCGF3-209ENST00000475288 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
PCGF3-209ENST00000475288 NHSQ6T4R5 1651 aa25.42■■□□□ 1.66
PCGF3-209ENST00000475288 SOX12O15370 315 aa25.42■■□□□ 1.66
PCGF3-209ENST00000475288 ERBB3P21860 1342 aa25.41■■□□□ 1.66
PCGF3-209ENST00000475288 LTN1O94822 1766 aa25.4■■□□□ 1.66
PCGF3-209ENST00000475288 TXNRD1Q16881 649 aa25.39■■□□□ 1.66
PCGF3-209ENST00000475288 EDC4Q6P2E9 1401 aaKnown RBP25.38■■□□□ 1.65
PCGF3-209ENST00000475288 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
PCGF3-209ENST00000475288 DCAF8L1A6NGE4 600 aa25.37■■□□□ 1.65
PCGF3-209ENST00000475288 YY1P25490 414 aa25.37■■□□□ 1.65
PCGF3-209ENST00000475288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.37■■□□□ 1.65
PCGF3-209ENST00000475288 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
PCGF3-209ENST00000475288 HDGFL2Q7Z4V5 671 aaPredicted RBP25.35■■□□□ 1.65
PCGF3-209ENST00000475288 STK32BQ9NY57 414 aa25.35■■□□□ 1.65
PCGF3-209ENST00000475288 SLC15A2Q16348 729 aa25.34■■□□□ 1.65
PCGF3-209ENST00000475288 NME9Q86XW9 330 aa25.34■■□□□ 1.65
PCGF3-209ENST00000475288 IL2RBP14784 551 aa25.33■■□□□ 1.65
PCGF3-209ENST00000475288 PDGFDQ9GZP0 370 aaPredicted RBP25.33■■□□□ 1.65
PCGF3-209ENST00000475288 MYOM1P52179 1685 aa25.32■■□□□ 1.64
PCGF3-209ENST00000475288 PTGER2P43116 358 aa25.32■■□□□ 1.64
PCGF3-209ENST00000475288 TERF2IPQ9NYB0 399 aa25.32■■□□□ 1.64
PCGF3-209ENST00000475288 PAPPAQ13219 1627 aa25.32■■□□□ 1.64
PCGF3-209ENST00000475288 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
PCGF3-209ENST00000475288 FAM208AQ9UK61 1670 aaKnown RBP25.31■■□□□ 1.64
PCGF3-209ENST00000475288 TMC1Q8TDI8 760 aa25.3■■□□□ 1.64
PCGF3-209ENST00000475288 ANKRD24Q8TF21 1146 aa25.3■■□□□ 1.64
PCGF3-209ENST00000475288 SLC12A5Q9H2X9 1139 aa25.3■■□□□ 1.64
PCGF3-209ENST00000475288 A0A1W2PP64 1363 aa25.3■■□□□ 1.64
PCGF3-209ENST00000475288 ZBTB7AO95365 584 aa25.29■■□□□ 1.64
PCGF3-209ENST00000475288 BTAF1O14981 1849 aa25.28■■□□□ 1.64
PCGF3-209ENST00000475288 MTFR1LQ9H019 292 aa25.28■■□□□ 1.64
PCGF3-209ENST00000475288 SGIP1Q9BQI5 828 aa25.25■■□□□ 1.63
PCGF3-209ENST00000475288 TONSLQ96HA7 1378 aa25.24■■□□□ 1.63
PCGF3-209ENST00000475288 IP6K1Q92551 441 aa25.24■■□□□ 1.63
PCGF3-209ENST00000475288 ACSBG1Q96GR2 724 aa25.24■■□□□ 1.63
PCGF3-209ENST00000475288 SLC24A1O60721 1099 aa25.23■■□□□ 1.63
PCGF3-209ENST00000475288 ATF5Q9Y2D1 282 aaPredicted RBP25.23■■□□□ 1.63
PCGF3-209ENST00000475288 UTRNP46939 3433 aa25.21■■□□□ 1.63
PCGF3-209ENST00000475288 QSER1Q2KHR3 1735 aa25.2■■□□□ 1.63
PCGF3-209ENST00000475288 MAP3K5Q99683 1374 aa25.2■■□□□ 1.63
PCGF3-209ENST00000475288 TESK2Q96S53 571 aa25.2■■□□□ 1.62
PCGF3-209ENST00000475288 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
PCGF3-209ENST00000475288 FHDC1Q9C0D6 1143 aaPredicted RBP25.18■■□□□ 1.62
PCGF3-209ENST00000475288 SLC27A3Q5K4L6 730 aa25.17■■□□□ 1.62
PCGF3-209ENST00000475288 LRRC4BQ9NT99 713 aa25.16■■□□□ 1.62
PCGF3-209ENST00000475288 COG3Q96JB2 828 aa25.15■■□□□ 1.62
PCGF3-209ENST00000475288 COL24A1Q17RW2 1714 aa25.15■■□□□ 1.62
PCGF3-209ENST00000475288 ZNF827Q17R98 1081 aa25.14■■□□□ 1.62
PCGF3-209ENST00000475288 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
PCGF3-209ENST00000475288 ARXQ96QS3 562 aa25.14■■□□□ 1.62
PCGF3-209ENST00000475288 ANKRD36BQ8N2N9 1353 aa25.14■■□□□ 1.61
PCGF3-209ENST00000475288 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
PCGF3-209ENST00000475288 AKT1S1Q96B36 256 aa25.13■■□□□ 1.61
PCGF3-209ENST00000475288 RTL1A6NKG5 1358 aa25.13■■□□□ 1.61
PCGF3-209ENST00000475288 SHANK3Q9BYB0 1731 aa25.12■■□□□ 1.61
PCGF3-209ENST00000475288 ST20-MTHFSA0A0A6YYL1 179 aa25.12■■□□□ 1.61
PCGF3-209ENST00000475288 HOXC9P31274 260 aa25.12■■□□□ 1.61
PCGF3-209ENST00000475288 KAT6BQ8WYB5 2073 aa25.11■■□□□ 1.61
PCGF3-209ENST00000475288 DDX54Q8TDD1 881 aaKnown RBP25.11■■□□□ 1.61
PCGF3-209ENST00000475288 LY75O60449 1722 aa25.11■■□□□ 1.61
PCGF3-209ENST00000475288 DOT1LQ8TEK3 1739 aa25.11■■□□□ 1.61
PCGF3-209ENST00000475288 CHD4Q14839 1912 aa25.1■■□□□ 1.61
PCGF3-209ENST00000475288 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
PCGF3-209ENST00000475288 NSD2O96028 1365 aa25.08■■□□□ 1.61
PCGF3-209ENST00000475288 AMPHP49418 695 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms