RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
PDPN-204ENST00000475043 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
PDPN-204ENST00000475043 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
PDPN-204ENST00000475043 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
PDPN-204ENST00000475043 SSH2Q76I76 1423 aa13.3□□□□□ -0.28
PDPN-204ENST00000475043 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
PDPN-204ENST00000475043 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
PDPN-204ENST00000475043 CPDO75976 1380 aa13.29□□□□□ -0.28
PDPN-204ENST00000475043 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
PDPN-204ENST00000475043 SLIT3O75094 1523 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 EP400Q96L91 3159 aa13.28□□□□□ -0.28
PDPN-204ENST00000475043 SOX12O15370 315 aa13.27□□□□□ -0.29
PDPN-204ENST00000475043 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
PDPN-204ENST00000475043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
PDPN-204ENST00000475043 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
PDPN-204ENST00000475043 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
PDPN-204ENST00000475043 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
PDPN-204ENST00000475043 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
PDPN-204ENST00000475043 THSD7AQ9UPZ6 1657 aa13.26□□□□□ -0.29
PDPN-204ENST00000475043 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
PDPN-204ENST00000475043 CLSPNQ9HAW4 1339 aa13.25□□□□□ -0.29
PDPN-204ENST00000475043 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
PDPN-204ENST00000475043 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 USP47Q96K76 1375 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 TESK2Q96S53 571 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
PDPN-204ENST00000475043 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
PDPN-204ENST00000475043 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
PDPN-204ENST00000475043 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
PDPN-204ENST00000475043 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
PDPN-204ENST00000475043 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
PDPN-204ENST00000475043 COL18A1P39060 1754 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 NME9Q86XW9 330 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
PDPN-204ENST00000475043 TMF1P82094 1093 aa13.21□□□□□ -0.29
PDPN-204ENST00000475043 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
PDPN-204ENST00000475043 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
PDPN-204ENST00000475043 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.29
PDPN-204ENST00000475043 LTN1O94822 1766 aa13.21□□□□□ -0.29
PDPN-204ENST00000475043 RGPD1P0DJD0 1748 aa13.21□□□□□ -0.3
PDPN-204ENST00000475043 CRB1P82279 1406 aa13.21□□□□□ -0.3
PDPN-204ENST00000475043 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
PDPN-204ENST00000475043 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 NFAT5O94916 1531 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
PDPN-204ENST00000475043 USP54Q70EL1 1684 aa13.2□□□□□ -0.3
PDPN-204ENST00000475043 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
PDPN-204ENST00000475043 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
PDPN-204ENST00000475043 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
PDPN-204ENST00000475043 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
PDPN-204ENST00000475043 BAG6P46379 1132 aa13.17□□□□□ -0.3
PDPN-204ENST00000475043 EVX2Q03828 476 aa13.17□□□□□ -0.3
PDPN-204ENST00000475043 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
PDPN-204ENST00000475043 WNK3Q9BYP7 1800 aa13.17□□□□□ -0.3
PDPN-204ENST00000475043 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
PDPN-204ENST00000475043 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
PDPN-204ENST00000475043 ABCC6O95255 1503 aa13.15□□□□□ -0.3
PDPN-204ENST00000475043 TRIM37O94972 964 aa13.15□□□□□ -0.3
PDPN-204ENST00000475043 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
PDPN-204ENST00000475043 OVOS2A0A0J9YW53 1432 aa13.14□□□□□ -0.31
PDPN-204ENST00000475043 OVOS2Q6IE36 1432 aa13.14□□□□□ -0.31
PDPN-204ENST00000475043 LRRC37A3O60309 1634 aa13.14□□□□□ -0.31
PDPN-204ENST00000475043 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
PDPN-204ENST00000475043 COG3Q96JB2 828 aa13.14□□□□□ -0.31
PDPN-204ENST00000475043 DDB1Q16531 1140 aa13.13□□□□□ -0.31
PDPN-204ENST00000475043 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
PDPN-204ENST00000475043 MYOM1P52179 1685 aa13.12□□□□□ -0.31
PDPN-204ENST00000475043 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
PDPN-204ENST00000475043 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
PDPN-204ENST00000475043 APBA3O96018 575 aa13.11□□□□□ -0.31
PDPN-204ENST00000475043 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
PDPN-204ENST00000475043 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
PDPN-204ENST00000475043 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
PDPN-204ENST00000475043 ERBB3P21860 1342 aa13.11□□□□□ -0.31
PDPN-204ENST00000475043 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
PDPN-204ENST00000475043 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
PDPN-204ENST00000475043 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
PDPN-204ENST00000475043 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
PDPN-204ENST00000475043 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
PDPN-204ENST00000475043 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
PDPN-204ENST00000475043 FBLN1P23142 703 aa13.09□□□□□ -0.31
PDPN-204ENST00000475043 AMPHP49418 695 aa13.09□□□□□ -0.31
PDPN-204ENST00000475043 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDPN-204ENST00000475043 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms