RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 IRF7Q92985 503 aa12.83□□□□□ -0.36
SENP6-206ENST00000474906 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
SENP6-206ENST00000474906 STK17AQ9UEE5 414 aa12.82□□□□□ -0.36
SENP6-206ENST00000474906 BMP2P12643 396 aa12.81□□□□□ -0.36
SENP6-206ENST00000474906 GMPRP36959 345 aa12.81□□□□□ -0.36
SENP6-206ENST00000474906 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
SENP6-206ENST00000474906 UPP2O95045 317 aa12.8□□□□□ -0.36
SENP6-206ENST00000474906 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
SENP6-206ENST00000474906 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
SENP6-206ENST00000474906 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
SENP6-206ENST00000474906 MAN1A2O60476 641 aa12.78□□□□□ -0.36
SENP6-206ENST00000474906 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
SENP6-206ENST00000474906 ZBTB33Q86T24 672 aa12.78□□□□□ -0.36
SENP6-206ENST00000474906 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
SENP6-206ENST00000474906 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
SENP6-206ENST00000474906 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
SENP6-206ENST00000474906 KCTD15Q96SI1 283 aaPredicted RBP12.77□□□□□ -0.37
SENP6-206ENST00000474906 RFC5P40937 340 aa12.76□□□□□ -0.37
SENP6-206ENST00000474906 PTK2Q05397 1052 aa12.76□□□□□ -0.37
SENP6-206ENST00000474906 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
SENP6-206ENST00000474906 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
SENP6-206ENST00000474906 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
SENP6-206ENST00000474906 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
SENP6-206ENST00000474906 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
SENP6-206ENST00000474906 ADAM32Q8TC27 787 aa12.73□□□□□ -0.37
SENP6-206ENST00000474906 GOPCQ9HD26 462 aa12.73□□□□□ -0.37
SENP6-206ENST00000474906 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
SENP6-206ENST00000474906 CBLBQ13191 982 aa12.72□□□□□ -0.37
SENP6-206ENST00000474906 Q6ZVU0 165 aa12.72□□□□□ -0.37
SENP6-206ENST00000474906 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
SENP6-206ENST00000474906 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
SENP6-206ENST00000474906 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.37
SENP6-206ENST00000474906 LORP23490 312 aaPredicted RBP12.7□□□□□ -0.38
SENP6-206ENST00000474906 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
SENP6-206ENST00000474906 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
SENP6-206ENST00000474906 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
SENP6-206ENST00000474906 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
SENP6-206ENST00000474906 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
SENP6-206ENST00000474906 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
SENP6-206ENST00000474906 SPINT1O43278 529 aa12.66□□□□□ -0.38
SENP6-206ENST00000474906 ZSCAN1Q8NBB4 408 aa12.66□□□□□ -0.38
SENP6-206ENST00000474906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.65□□□□□ -0.38
SENP6-206ENST00000474906 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
SENP6-206ENST00000474906 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
SENP6-206ENST00000474906 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
SENP6-206ENST00000474906 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
SENP6-206ENST00000474906 AGBL1Q96MI9 1066 aa12.62□□□□□ -0.39
SENP6-206ENST00000474906 TMPRSS4Q9NRS4 437 aa12.62□□□□□ -0.39
SENP6-206ENST00000474906 FIGNL2A6NMB9 653 aa12.61□□□□□ -0.39
SENP6-206ENST00000474906 RAB15P59190 212 aa12.61□□□□□ -0.39
SENP6-206ENST00000474906 RELBQ01201 579 aa12.61□□□□□ -0.39
SENP6-206ENST00000474906 ESPNB1AK53 854 aa12.6□□□□□ -0.39
SENP6-206ENST00000474906 PTSQ03393 145 aa12.6□□□□□ -0.39
SENP6-206ENST00000474906 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
SENP6-206ENST00000474906 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
SENP6-206ENST00000474906 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
SENP6-206ENST00000474906 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
SENP6-206ENST00000474906 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
SENP6-206ENST00000474906 INSM2Q96T92 566 aaPredicted RBP12.57□□□□□ -0.4
SENP6-206ENST00000474906 LILRA1O75019 489 aa12.56□□□□□ -0.4
SENP6-206ENST00000474906 ADH1AP07327 375 aa12.56□□□□□ -0.4
SENP6-206ENST00000474906 ZBBXA8MT70 800 aa12.54□□□□□ -0.4
SENP6-206ENST00000474906 ADD1P35611 737 aaKnown RBP12.54□□□□□ -0.4
SENP6-206ENST00000474906 SEPT12Q8IYM1 358 aa12.54□□□□□ -0.4
SENP6-206ENST00000474906 ZNF395Q9H8N7 513 aaPredicted RBP12.54□□□□□ -0.4
SENP6-206ENST00000474906 POLMQ9NP87 494 aaPredicted RBP12.54□□□□□ -0.4
SENP6-206ENST00000474906 FBXO45P0C2W1 286 aa12.53□□□□□ -0.4
SENP6-206ENST00000474906 CCDC155Q8N6L0 562 aa12.53□□□□□ -0.4
SENP6-206ENST00000474906 SLC35F4A4IF30 521 aa12.52□□□□□ -0.41
SENP6-206ENST00000474906 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
SENP6-206ENST00000474906 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
SENP6-206ENST00000474906 GPR161Q8N6U8 529 aaKnown RBP12.51□□□□□ -0.41
SENP6-206ENST00000474906 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
SENP6-206ENST00000474906 CYLDQ9NQC7 956 aa12.5□□□□□ -0.41
SENP6-206ENST00000474906 PTGIRP43119 386 aa12.49□□□□□ -0.41
SENP6-206ENST00000474906 KRT76Q01546 638 aa12.49□□□□□ -0.41
SENP6-206ENST00000474906 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
SENP6-206ENST00000474906 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
SENP6-206ENST00000474906 GIGYF1O75420 1035 aaPredicted RBP12.48□□□□□ -0.41
SENP6-206ENST00000474906 BANK1Q8NDB2 785 aa12.47□□□□□ -0.41
SENP6-206ENST00000474906 SOCS7O14512 581 aa12.46□□□□□ -0.41
SENP6-206ENST00000474906 GPR37L1O60883 481 aa12.46□□□□□ -0.41
SENP6-206ENST00000474906 ITGA6P23229 1130 aa12.46□□□□□ -0.41
SENP6-206ENST00000474906 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
SENP6-206ENST00000474906 MTMR14Q8NCE2 650 aa12.45□□□□□ -0.42
SENP6-206ENST00000474906 NR1H3Q13133 447 aa12.44□□□□□ -0.42
SENP6-206ENST00000474906 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
SENP6-206ENST00000474906 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
SENP6-206ENST00000474906 COL25A1Q9BXS0 654 aaPredicted RBP12.44□□□□□ -0.42
SENP6-206ENST00000474906 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
SENP6-206ENST00000474906 CDC14CA4D256 554 aa12.41□□□□□ -0.42
SENP6-206ENST00000474906 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
SENP6-206ENST00000474906 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
SENP6-206ENST00000474906 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
SENP6-206ENST00000474906 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
SENP6-206ENST00000474906 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
SENP6-206ENST00000474906 RNFT1Q5M7Z0 435 aa12.4□□□□□ -0.42
SENP6-206ENST00000474906 LYSMD3Q7Z3D4 306 aa12.4□□□□□ -0.42
SENP6-206ENST00000474906 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
SENP6-206ENST00000474906 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms