RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
COL8A1-206ENST00000474648 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
COL8A1-206ENST00000474648 NFAT5O94916 1531 aa13.52□□□□□ -0.25
COL8A1-206ENST00000474648 CPDO75976 1380 aa13.51□□□□□ -0.25
COL8A1-206ENST00000474648 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 INSRP06213 1382 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 FAM83GA6ND36 823 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-206ENST00000474648 IP6K1Q92551 441 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
COL8A1-206ENST00000474648 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-206ENST00000474648 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
COL8A1-206ENST00000474648 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
COL8A1-206ENST00000474648 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-206ENST00000474648 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-206ENST00000474648 HOXC9P31274 260 aa13.49□□□□□ -0.25
COL8A1-206ENST00000474648 AMPHP49418 695 aa13.49□□□□□ -0.25
COL8A1-206ENST00000474648 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-206ENST00000474648 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
COL8A1-206ENST00000474648 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-206ENST00000474648 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
COL8A1-206ENST00000474648 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-206ENST00000474648 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
COL8A1-206ENST00000474648 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
COL8A1-206ENST00000474648 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
COL8A1-206ENST00000474648 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
COL8A1-206ENST00000474648 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
COL8A1-206ENST00000474648 IL13P35225 146 aa13.46□□□□□ -0.25
COL8A1-206ENST00000474648 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
COL8A1-206ENST00000474648 PRDM11Q9NQV5 511 aa13.46□□□□□ -0.25
COL8A1-206ENST00000474648 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
COL8A1-206ENST00000474648 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
COL8A1-206ENST00000474648 FLT4P35916 1363 aa13.45□□□□□ -0.26
COL8A1-206ENST00000474648 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
COL8A1-206ENST00000474648 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
COL8A1-206ENST00000474648 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
COL8A1-206ENST00000474648 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
COL8A1-206ENST00000474648 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-206ENST00000474648 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
COL8A1-206ENST00000474648 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
COL8A1-206ENST00000474648 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-206ENST00000474648 LRP6O75581 1613 aa13.43□□□□□ -0.26
COL8A1-206ENST00000474648 MAP2P11137 1827 aaKnown RBP13.42□□□□□ -0.26
COL8A1-206ENST00000474648 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
COL8A1-206ENST00000474648 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-206ENST00000474648 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
COL8A1-206ENST00000474648 CAMTA1Q9Y6Y1 1673 aa13.41□□□□□ -0.26
COL8A1-206ENST00000474648 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
COL8A1-206ENST00000474648 COL18A1P39060 1754 aa13.41□□□□□ -0.26
COL8A1-206ENST00000474648 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
COL8A1-206ENST00000474648 ERBB3P21860 1342 aa13.4□□□□□ -0.26
COL8A1-206ENST00000474648 NBPF6Q5VWK0 638 aa13.4□□□□□ -0.26
COL8A1-206ENST00000474648 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-206ENST00000474648 FNBP4Q8N3X1 1017 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-206ENST00000474648 NBPF4Q96M43 638 aa13.4□□□□□ -0.26
COL8A1-206ENST00000474648 EYA1Q99502 592 aa13.4□□□□□ -0.26
COL8A1-206ENST00000474648 ADAMTS8Q9UP79 889 aa13.4□□□□□ -0.26
COL8A1-206ENST00000474648 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
COL8A1-206ENST00000474648 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
COL8A1-206ENST00000474648 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
COL8A1-206ENST00000474648 ABCC6O95255 1503 aa13.39□□□□□ -0.27
COL8A1-206ENST00000474648 EVA1CP58658 441 aa13.38□□□□□ -0.27
COL8A1-206ENST00000474648 LARP1Q6PKG0 1096 aaKnown RBP13.38□□□□□ -0.27
COL8A1-206ENST00000474648 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
COL8A1-206ENST00000474648 SLIT2O94813 1529 aa13.38□□□□□ -0.27
COL8A1-206ENST00000474648 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
COL8A1-206ENST00000474648 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
COL8A1-206ENST00000474648 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
COL8A1-206ENST00000474648 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
COL8A1-206ENST00000474648 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL8A1-206ENST00000474648 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
COL8A1-206ENST00000474648 UNC5CLQ8IV45 518 aa13.37□□□□□ -0.27
COL8A1-206ENST00000474648 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
COL8A1-206ENST00000474648 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
COL8A1-206ENST00000474648 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
COL8A1-206ENST00000474648 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
COL8A1-206ENST00000474648 LTN1O94822 1766 aa13.36□□□□□ -0.27
COL8A1-206ENST00000474648 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
COL8A1-206ENST00000474648 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL8A1-206ENST00000474648 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
COL8A1-206ENST00000474648 FAM9BQ8IZU0 186 aa13.36□□□□□ -0.27
COL8A1-206ENST00000474648 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
COL8A1-206ENST00000474648 FCHSD2O94868 740 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 HMOX1P09601 288 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
COL8A1-206ENST00000474648 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
COL8A1-206ENST00000474648 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
COL8A1-206ENST00000474648 USP21Q9UK80 565 aa13.34□□□□□ -0.27
COL8A1-206ENST00000474648 AFF2P51816 1311 aa13.34□□□□□ -0.27
COL8A1-206ENST00000474648 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
COL8A1-206ENST00000474648 KDRP35968 1356 aa13.32□□□□□ -0.28
COL8A1-206ENST00000474648 VPS72Q15906 364 aa13.32□□□□□ -0.28
COL8A1-206ENST00000474648 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
COL8A1-206ENST00000474648 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
COL8A1-206ENST00000474648 CRB1P82279 1406 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms