RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
TNFRSF9-202ENST00000474475 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
TNFRSF9-202ENST00000474475 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 EVA1CP58658 441 aa12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 NLRP6P59044 892 aa12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
TNFRSF9-202ENST00000474475 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF9-202ENST00000474475 BAG6P46379 1132 aa12.52□□□□□ -0.41
TNFRSF9-202ENST00000474475 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
TNFRSF9-202ENST00000474475 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF9-202ENST00000474475 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
TNFRSF9-202ENST00000474475 COL18A1P39060 1754 aa12.51□□□□□ -0.41
TNFRSF9-202ENST00000474475 TTC21BQ7Z4L5 1316 aa12.51□□□□□ -0.41
TNFRSF9-202ENST00000474475 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
TNFRSF9-202ENST00000474475 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
TNFRSF9-202ENST00000474475 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 TCP11L2Q8N4U5 519 aa12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
TNFRSF9-202ENST00000474475 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
TNFRSF9-202ENST00000474475 CRB1P82279 1406 aa12.49□□□□□ -0.41
TNFRSF9-202ENST00000474475 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF9-202ENST00000474475 FAM196AQ6ZSG2 479 aa12.49□□□□□ -0.41
TNFRSF9-202ENST00000474475 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
TNFRSF9-202ENST00000474475 CD163L1Q9NR16 1453 aa12.48□□□□□ -0.41
TNFRSF9-202ENST00000474475 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
TNFRSF9-202ENST00000474475 TTC21AQ8NDW8 1320 aa12.48□□□□□ -0.41
TNFRSF9-202ENST00000474475 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
TNFRSF9-202ENST00000474475 TRIM37O94972 964 aa12.47□□□□□ -0.41
TNFRSF9-202ENST00000474475 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
TNFRSF9-202ENST00000474475 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
TNFRSF9-202ENST00000474475 NFAT5O94916 1531 aa12.47□□□□□ -0.41
TNFRSF9-202ENST00000474475 RGPD5Q99666 1765 aa12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 SOX12O15370 315 aa12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 LRRC37A3O60309 1634 aa12.46□□□□□ -0.41
TNFRSF9-202ENST00000474475 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
TNFRSF9-202ENST00000474475 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
TNFRSF9-202ENST00000474475 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
TNFRSF9-202ENST00000474475 TOM1L2Q6ZVM7 507 aa12.45□□□□□ -0.42
TNFRSF9-202ENST00000474475 CAMKK2Q96RR4 588 aa12.45□□□□□ -0.42
TNFRSF9-202ENST00000474475 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
TNFRSF9-202ENST00000474475 LRP5O75197 1615 aa12.44□□□□□ -0.42
TNFRSF9-202ENST00000474475 WDR17Q8IZU2 1322 aa12.44□□□□□ -0.42
TNFRSF9-202ENST00000474475 APBA3O96018 575 aa12.44□□□□□ -0.42
TNFRSF9-202ENST00000474475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNFRSF9-202ENST00000474475 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
TNFRSF9-202ENST00000474475 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
TNFRSF9-202ENST00000474475 RREB1Q92766 1687 aa12.43□□□□□ -0.42
TNFRSF9-202ENST00000474475 NME9Q86XW9 330 aa12.43□□□□□ -0.42
TNFRSF9-202ENST00000474475 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
TNFRSF9-202ENST00000474475 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
TNFRSF9-202ENST00000474475 TESK2Q96S53 571 aa12.42□□□□□ -0.42
TNFRSF9-202ENST00000474475 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
TNFRSF9-202ENST00000474475 ABCC6O95255 1503 aa12.42□□□□□ -0.42
TNFRSF9-202ENST00000474475 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 LTN1O94822 1766 aa12.41□□□□□ -0.42
TNFRSF9-202ENST00000474475 EDC4Q6P2E9 1401 aaKnown RBP12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 SBF2Q86WG5 1849 aa12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 ST20-MTHFSA0A0A6YYL1 179 aa12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 DDB1Q16531 1140 aa12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 CARD10Q9BWT7 1032 aa12.4□□□□□ -0.42
TNFRSF9-202ENST00000474475 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
TNFRSF9-202ENST00000474475 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
TNFRSF9-202ENST00000474475 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
TNFRSF9-202ENST00000474475 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF9-202ENST00000474475 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF9-202ENST00000474475 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF9-202ENST00000474475 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
TNFRSF9-202ENST00000474475 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
TNFRSF9-202ENST00000474475 ERBB3P21860 1342 aa12.37□□□□□ -0.43
TNFRSF9-202ENST00000474475 RGPD3A6NKT7 1758 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 RGPD4Q7Z3J3 1758 aa12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 NINLQ9Y2I6 1382 aa12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 MIER1Q8N108 512 aa12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 BCL9O00512 1426 aa12.36□□□□□ -0.43
TNFRSF9-202ENST00000474475 USP47Q96K76 1375 aa12.35□□□□□ -0.43
TNFRSF9-202ENST00000474475 EXOC5O00471 708 aa12.34□□□□□ -0.43
TNFRSF9-202ENST00000474475 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
TNFRSF9-202ENST00000474475 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF9-202ENST00000474475 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
TNFRSF9-202ENST00000474475 PITPNM1O00562 1244 aa12.33□□□□□ -0.44
TNFRSF9-202ENST00000474475 PLSCR1O15162 318 aa12.33□□□□□ -0.44
TNFRSF9-202ENST00000474475 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms