RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
LDLRAP1-204ENST00000474283 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
LDLRAP1-204ENST00000474283 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
LDLRAP1-204ENST00000474283 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
LDLRAP1-204ENST00000474283 LRP6O75581 1613 aa18.31■□□□□ 0.52
LDLRAP1-204ENST00000474283 NWD2Q9ULI1 1742 aa18.31■□□□□ 0.52
LDLRAP1-204ENST00000474283 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
LDLRAP1-204ENST00000474283 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
LDLRAP1-204ENST00000474283 CPDO75976 1380 aa18.3■□□□□ 0.52
LDLRAP1-204ENST00000474283 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
LDLRAP1-204ENST00000474283 INSRP06213 1382 aa18.3■□□□□ 0.52
LDLRAP1-204ENST00000474283 FLT4P35916 1363 aa18.3■□□□□ 0.52
LDLRAP1-204ENST00000474283 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
LDLRAP1-204ENST00000474283 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
LDLRAP1-204ENST00000474283 ABCC6O95255 1503 aa18.28■□□□□ 0.52
LDLRAP1-204ENST00000474283 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
LDLRAP1-204ENST00000474283 HOXC9P31274 260 aa18.28■□□□□ 0.52
LDLRAP1-204ENST00000474283 CFAP53Q96M91 514 aa18.28■□□□□ 0.52
LDLRAP1-204ENST00000474283 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
LDLRAP1-204ENST00000474283 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
LDLRAP1-204ENST00000474283 IP6K1Q92551 441 aa18.27■□□□□ 0.52
LDLRAP1-204ENST00000474283 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.51
LDLRAP1-204ENST00000474283 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
LDLRAP1-204ENST00000474283 HSP90AB2PQ58FF8 381 aa18.26■□□□□ 0.51
LDLRAP1-204ENST00000474283 LTV1Q96GA3 475 aaPredicted RBP18.26■□□□□ 0.51
LDLRAP1-204ENST00000474283 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
LDLRAP1-204ENST00000474283 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-204ENST00000474283 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
LDLRAP1-204ENST00000474283 WDR43Q15061 677 aaKnown RBP eCLIP18.24■□□□□ 0.51
LDLRAP1-204ENST00000474283 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
LDLRAP1-204ENST00000474283 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
LDLRAP1-204ENST00000474283 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
LDLRAP1-204ENST00000474283 HNRNPUQ00839 825 aaKnown RBP eCLIP18.23■□□□□ 0.51
LDLRAP1-204ENST00000474283 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
LDLRAP1-204ENST00000474283 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
LDLRAP1-204ENST00000474283 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.23■□□□□ 0.51
LDLRAP1-204ENST00000474283 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
LDLRAP1-204ENST00000474283 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 EVA1CP58658 441 aa18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
LDLRAP1-204ENST00000474283 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
LDLRAP1-204ENST00000474283 WNK3Q9BYP7 1800 aa18.19■□□□□ 0.5
LDLRAP1-204ENST00000474283 SLIT2O94813 1529 aa18.18■□□□□ 0.5
LDLRAP1-204ENST00000474283 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
LDLRAP1-204ENST00000474283 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
LDLRAP1-204ENST00000474283 ERBB3P21860 1342 aa18.18■□□□□ 0.5
LDLRAP1-204ENST00000474283 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
LDLRAP1-204ENST00000474283 IL13P35225 146 aa18.16■□□□□ 0.5
LDLRAP1-204ENST00000474283 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
LDLRAP1-204ENST00000474283 AFF2P51816 1311 aa18.16■□□□□ 0.5
LDLRAP1-204ENST00000474283 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
LDLRAP1-204ENST00000474283 NLRP2Q9NX02 1062 aa18.15■□□□□ 0.5
LDLRAP1-204ENST00000474283 USP21Q9UK80 565 aa18.15■□□□□ 0.5
LDLRAP1-204ENST00000474283 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
LDLRAP1-204ENST00000474283 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
LDLRAP1-204ENST00000474283 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
LDLRAP1-204ENST00000474283 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
LDLRAP1-204ENST00000474283 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
LDLRAP1-204ENST00000474283 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 USHBP1Q8N6Y0 703 aa18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 EYA1Q99502 592 aa18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 CRB1P82279 1406 aa18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 BCL9LQ86UU0 1499 aa18.13■□□□□ 0.49
LDLRAP1-204ENST00000474283 HMOX1P09601 288 aa18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 NBPF6Q5VWK0 638 aa18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 NBPF4Q96M43 638 aa18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
LDLRAP1-204ENST00000474283 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
LDLRAP1-204ENST00000474283 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
LDLRAP1-204ENST00000474283 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
LDLRAP1-204ENST00000474283 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
LDLRAP1-204ENST00000474283 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
LDLRAP1-204ENST00000474283 CARD10Q9BWT7 1032 aa18.08■□□□□ 0.48
LDLRAP1-204ENST00000474283 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
LDLRAP1-204ENST00000474283 VPS72Q15906 364 aa18.07■□□□□ 0.48
LDLRAP1-204ENST00000474283 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
LDLRAP1-204ENST00000474283 TRPC5Q9UL62 973 aaPredicted RBP18.06■□□□□ 0.48
LDLRAP1-204ENST00000474283 ATRNO75882 1429 aa18.06■□□□□ 0.48
LDLRAP1-204ENST00000474283 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
LDLRAP1-204ENST00000474283 GLI3P10071 1580 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 NEFMP07197 916 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 ZNF772Q68DY9 489 aaPredicted RBP18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
LDLRAP1-204ENST00000474283 KDRP35968 1356 aa18.04■□□□□ 0.48
LDLRAP1-204ENST00000474283 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
LDLRAP1-204ENST00000474283 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
LDLRAP1-204ENST00000474283 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms