RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 AMHR2Q16671 573 aa7.36□□□□□ -1.23
ECHDC1-213ENST00000474240 PLA2G4EQ3MJ16 856 aa7.36□□□□□ -1.23
ECHDC1-213ENST00000474240 LYPD4Q6UWN0 246 aa7.36□□□□□ -1.23
ECHDC1-213ENST00000474240 PRKCSHP14314 528 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-213ENST00000474240 MAP3K10Q02779 954 aa7.35□□□□□ -1.23
ECHDC1-213ENST00000474240 SPOCK3Q9BQ16 436 aa7.35□□□□□ -1.23
ECHDC1-213ENST00000474240 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
ECHDC1-213ENST00000474240 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
ECHDC1-213ENST00000474240 MAGEB6P1A0A0J9YX57 407 aa7.34□□□□□ -1.23
ECHDC1-213ENST00000474240 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-213ENST00000474240 SPINT1O43278 529 aa7.34□□□□□ -1.23
ECHDC1-213ENST00000474240 TTLL12Q14166 644 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-213ENST00000474240 PCDHB15Q9Y5E8 787 aa7.34□□□□□ -1.23
ECHDC1-213ENST00000474240 TRIM66O15016 1216 aa7.33□□□□□ -1.24
ECHDC1-213ENST00000474240 ITGB2P05107 769 aa7.33□□□□□ -1.24
ECHDC1-213ENST00000474240 RSBN1LQ6PCB5 846 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-213ENST00000474240 SH3RF1Q7Z6J0 888 aa7.33□□□□□ -1.24
ECHDC1-213ENST00000474240 CARD14Q9BXL6 1004 aa7.33□□□□□ -1.24
ECHDC1-213ENST00000474240 HRCP23327 699 aa7.32□□□□□ -1.24
ECHDC1-213ENST00000474240 PPP1R26Q5T8A7 1209 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-213ENST00000474240 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
ECHDC1-213ENST00000474240 PROCP04070 461 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 CTSOP43234 321 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 PDE4DQ08499 809 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 Q6ZVU0 165 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 CABLES1Q8TDN4 633 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 TSC1Q92574 1164 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 ZBTB3Q9H5J0 574 aa7.31□□□□□ -1.24
ECHDC1-213ENST00000474240 SRSF11Q05519 484 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 GAS6Q14393 721 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 NBPF14Q5TI25 921 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 BEGAINQ9BUH8 593 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
ECHDC1-213ENST00000474240 CNTNAP5Q8WYK1 1306 aa7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 RELBQ01201 579 aa7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 GIGYF2Q6Y7W6 1299 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 SH3BP5LQ7L8J4 393 aa7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 INSM2Q96T92 566 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-213ENST00000474240 PHF20L1A8MW92 1017 aa7.28□□□□□ -1.24
ECHDC1-213ENST00000474240 GJA5P36382 358 aa7.28□□□□□ -1.24
ECHDC1-213ENST00000474240 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
ECHDC1-213ENST00000474240 POLMQ9NP87 494 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-213ENST00000474240 NEUROD2Q15784 382 aa7.27□□□□□ -1.25
ECHDC1-213ENST00000474240 ERFEQ4G0M1 354 aa7.27□□□□□ -1.25
ECHDC1-213ENST00000474240 ARMC2Q8NEN0 867 aa7.27□□□□□ -1.25
ECHDC1-213ENST00000474240 K7ELQ4 463 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-213ENST00000474240 ENAMQ9NRM1 1142 aa7.26□□□□□ -1.25
ECHDC1-213ENST00000474240 CUEDC1Q9NWM3 386 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-213ENST00000474240 PODNQ7Z5L7 613 aa7.25□□□□□ -1.25
ECHDC1-213ENST00000474240 PARP9Q8IXQ6 854 aa7.25□□□□□ -1.25
ECHDC1-213ENST00000474240 Q8N3U1 123 aa7.25□□□□□ -1.25
ECHDC1-213ENST00000474240 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 DIXDC1Q155Q3 683 aa7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 PRPF38BQ5VTL8 546 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 DDRGK1Q96HY6 314 aa7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 PSMG3-AS1Q96PY0 264 aa7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-213ENST00000474240 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-213ENST00000474240 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
ECHDC1-213ENST00000474240 KDM4CQ9H3R0 1056 aa7.23□□□□□ -1.25
ECHDC1-213ENST00000474240 GPR25O00155 361 aa7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 SLC10A4Q96EP9 437 aa7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 KCTD15Q96SI1 283 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 MBIPQ9NS73 344 aa7.22□□□□□ -1.25
ECHDC1-213ENST00000474240 QPCTQ16769 361 aa7.21□□□□□ -1.26
ECHDC1-213ENST00000474240 BEND7Q8N7W2 519 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-213ENST00000474240 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-213ENST00000474240 IGF1RP08069 1367 aa7.2□□□□□ -1.26
ECHDC1-213ENST00000474240 INTS6LQ5JSJ4 861 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-213ENST00000474240 KRTAP9-6A0A140TA67 174 aa7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 BCRP11274 1271 aa7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 BAG6P46379 1132 aa7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 DHX9Q08211 1270 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 NUTM2DQ5VT03 806 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 NUTM2AQ8IVF1 878 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 RSPH6AQ9H0K4 717 aa7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 LIMD1Q9UGP4 676 aa7.19□□□□□ -1.26
ECHDC1-213ENST00000474240 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-213ENST00000474240 GPKOWQ92917 476 aaPredicted RBP eCLIP7.18□□□□□ -1.26
ECHDC1-213ENST00000474240 ARHGAP9Q9BRR9 750 aa7.18□□□□□ -1.26
ECHDC1-213ENST00000474240 ADH1AP07327 375 aa7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 FURINP09958 794 aa7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 RHOQP17081 205 aa7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 ACDQ96AP0 544 aa7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 GPBP1L1Q9HC44 474 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 TMPRSS4Q9NRS4 437 aa7.17□□□□□ -1.26
ECHDC1-213ENST00000474240 LYSMD3Q7Z3D4 306 aa7.16□□□□□ -1.26
ECHDC1-213ENST00000474240 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms